RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 CCDC43Q96MW1 224 aaKnown RBP26.81■■□□□ 1.88
TM9SF3-201ENST00000371142 SAFBQ15424 915 aaKnown RBP eCLIP26.81■■□□□ 1.88
TM9SF3-201ENST00000371142 CCDC7Q96M83 1385 aa26.81■■□□□ 1.88
TM9SF3-201ENST00000371142 RALYLQ86SE5 291 aaKnown RBP26.81■■□□□ 1.88
TM9SF3-201ENST00000371142 NLRP2Q9NX02 1062 aa26.8■■□□□ 1.88
TM9SF3-201ENST00000371142 CCDC73Q6ZRK6 1079 aa26.8■■□□□ 1.88
TM9SF3-201ENST00000371142 UBTFL1P0CB47 393 aaPredicted RBP26.8■■□□□ 1.88
TM9SF3-201ENST00000371142 TMEM132EQ6IEE7 984 aa26.79■■□□□ 1.88
TM9SF3-201ENST00000371142 MYOM3Q5VTT5 1437 aa26.79■■□□□ 1.88
TM9SF3-201ENST00000371142 FANCIQ9NVI1 1328 aa26.78■■□□□ 1.88
TM9SF3-201ENST00000371142 BCL11BQ9C0K0 894 aaPredicted RBP26.78■■□□□ 1.88
TM9SF3-201ENST00000371142 MTMR7Q9Y216 660 aa26.78■■□□□ 1.88
TM9SF3-201ENST00000371142 NAP1L1P55209 391 aaKnown RBP26.78■■□□□ 1.88
TM9SF3-201ENST00000371142 KLHL34Q8N239 644 aa26.77■■□□□ 1.88
TM9SF3-201ENST00000371142 FAM13BQ9NYF5 915 aa26.77■■□□□ 1.88
TM9SF3-201ENST00000371142 CDC45O75419 566 aa26.76■■□□□ 1.87
TM9SF3-201ENST00000371142 ATF3P18847 181 aa26.76■■□□□ 1.87
TM9SF3-201ENST00000371142 ATAD2BQ9ULI0 1458 aa26.75■■□□□ 1.87
TM9SF3-201ENST00000371142 IFT57Q9NWB7 429 aa26.75■■□□□ 1.87
TM9SF3-201ENST00000371142 MIA2Q96PC5 1412 aa26.75■■□□□ 1.87
TM9SF3-201ENST00000371142 CWC22Q9HCG8 908 aaKnown RBP26.73■■□□□ 1.87
TM9SF3-201ENST00000371142 FAM69CQ0P6D2 419 aa26.72■■□□□ 1.87
TM9SF3-201ENST00000371142 PRDM2Q13029 1718 aa26.72■■□□□ 1.87
TM9SF3-201ENST00000371142 NINLQ9Y2I6 1382 aa26.72■■□□□ 1.87
TM9SF3-201ENST00000371142 ADAMTS8Q9UP79 889 aa26.72■■□□□ 1.87
TM9SF3-201ENST00000371142 FSD1Q9BTV5 496 aa26.72■■□□□ 1.87
TM9SF3-201ENST00000371142 VSIG10Q8N0Z9 540 aa26.72■■□□□ 1.87
TM9SF3-201ENST00000371142 CNTLNQ9NXG0 1405 aa26.71■■□□□ 1.87
TM9SF3-201ENST00000371142 NLRP6P59044 892 aa26.71■■□□□ 1.87
TM9SF3-201ENST00000371142 CNTROBQ8N137 903 aa26.71■■□□□ 1.87
TM9SF3-201ENST00000371142 FAM177BA6PVY3 158 aa26.7■■□□□ 1.87
TM9SF3-201ENST00000371142 MTHFSP49914 203 aa26.7■■□□□ 1.86
TM9SF3-201ENST00000371142 OSCARQ8IYS5 282 aa26.69■■□□□ 1.86
TM9SF3-201ENST00000371142 CNKSR2Q8WXI2 1034 aa26.69■■□□□ 1.86
TM9SF3-201ENST00000371142 FGD6Q6ZV73 1430 aa26.69■■□□□ 1.86
TM9SF3-201ENST00000371142 DNAJC2Q99543 621 aaKnown RBP26.68■■□□□ 1.86
TM9SF3-201ENST00000371142 PDILTQ8N807 584 aa26.68■■□□□ 1.86
TM9SF3-201ENST00000371142 TEX35Q5T0J7 233 aa26.68■■□□□ 1.86
TM9SF3-201ENST00000371142 BRMS1Q9HCU9 246 aa26.68■■□□□ 1.86
TM9SF3-201ENST00000371142 OLFM4Q6UX06 510 aa26.67■■□□□ 1.86
TM9SF3-201ENST00000371142 MNS1Q8NEH6 495 aa26.67■■□□□ 1.86
TM9SF3-201ENST00000371142 CT47A1Q5JQC4 288 aaPredicted RBP26.67■■□□□ 1.86
TM9SF3-201ENST00000371142 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.66■■□□□ 1.86
TM9SF3-201ENST00000371142 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.66■■□□□ 1.86
TM9SF3-201ENST00000371142 PSMA5P28066 241 aa26.66■■□□□ 1.86
TM9SF3-201ENST00000371142 SURF6O75683 361 aaKnown RBP26.66■■□□□ 1.86
TM9SF3-201ENST00000371142 FAM43AQ8N2R8 423 aa26.65■■□□□ 1.86
TM9SF3-201ENST00000371142 RNF214Q8ND24 703 aa26.65■■□□□ 1.86
TM9SF3-201ENST00000371142 NFKBIBQ15653 356 aa26.65■■□□□ 1.86
TM9SF3-201ENST00000371142 RUFY1Q96T51 708 aa26.65■■□□□ 1.86
TM9SF3-201ENST00000371142 GAPVD1Q14C86 1478 aa26.65■■□□□ 1.86
TM9SF3-201ENST00000371142 SMARCA4P51532 1647 aa26.65■■□□□ 1.86
TM9SF3-201ENST00000371142 C1orf115Q9H7X2 142 aa26.64■■□□□ 1.86
TM9SF3-201ENST00000371142 CDCA7LQ96GN5 454 aa26.64■■□□□ 1.86
TM9SF3-201ENST00000371142 TCP11L2Q8N4U5 519 aa26.64■■□□□ 1.85
TM9SF3-201ENST00000371142 SDF4Q9BRK5 362 aa26.64■■□□□ 1.85
TM9SF3-201ENST00000371142 EPS15P42566 896 aa26.64■■□□□ 1.85
TM9SF3-201ENST00000371142 CCDC30Q5VVM6 783 aa26.64■■□□□ 1.85
TM9SF3-201ENST00000371142 CUX1P39880 1505 aa26.63■■□□□ 1.85
TM9SF3-201ENST00000371142 CLASRPQ8N2M8 674 aaKnown RBP26.63■■□□□ 1.85
TM9SF3-201ENST00000371142 XBP1P17861 261 aa26.62■■□□□ 1.85
TM9SF3-201ENST00000371142 IKQ13123 557 aaPredicted RBP26.62■■□□□ 1.85
TM9SF3-201ENST00000371142 NAT10Q9H0A0 1025 aaKnown RBP26.62■■□□□ 1.85
TM9SF3-201ENST00000371142 ABTB2Q8N961 1025 aa26.62■■□□□ 1.85
TM9SF3-201ENST00000371142 FGD5Q6ZNL6 1462 aa26.61■■□□□ 1.85
TM9SF3-201ENST00000371142 ANKRD50Q9ULJ7 1429 aa26.6■■□□□ 1.85
TM9SF3-201ENST00000371142 RAD54L2Q9Y4B4 1467 aa26.6■■□□□ 1.85
TM9SF3-201ENST00000371142 ATP2B1P20020 1258 aa26.6■■□□□ 1.85
TM9SF3-201ENST00000371142 AAMPQ13685 434 aa26.6■■□□□ 1.85
TM9SF3-201ENST00000371142 ODF2Q5BJF6 829 aa26.6■■□□□ 1.85
TM9SF3-201ENST00000371142 TTLL5Q6EMB2 1281 aa26.6■■□□□ 1.85
TM9SF3-201ENST00000371142 PRKAR2BP31323 418 aa26.6■■□□□ 1.85
TM9SF3-201ENST00000371142 EXOSC9Q06265 439 aaKnown RBP26.6■■□□□ 1.85
TM9SF3-201ENST00000371142 NASPP49321 788 aaPredicted RBP26.59■■□□□ 1.85
TM9SF3-201ENST00000371142 TBC1D2BQ9UPU7 963 aa26.59■■□□□ 1.85
TM9SF3-201ENST00000371142 GNAI3P08754 354 aa26.59■■□□□ 1.85
TM9SF3-201ENST00000371142 AK7Q96M32 723 aa26.59■■□□□ 1.85
TM9SF3-201ENST00000371142 BRD4O60885 1362 aaPredicted RBP26.59■■□□□ 1.85
TM9SF3-201ENST00000371142 CFAP70Q5T0N1 1121 aa26.58■■□□□ 1.85
TM9SF3-201ENST00000371142 OFD1O75665 1012 aa26.58■■□□□ 1.85
TM9SF3-201ENST00000371142 RBM42Q9BTD8 480 aaKnown RBP26.58■■□□□ 1.85
TM9SF3-201ENST00000371142 ARGLU1Q9NWB6 273 aaPredicted RBP26.58■■□□□ 1.85
TM9SF3-201ENST00000371142 ZNF428Q96B54 188 aa26.57■■□□□ 1.84
TM9SF3-201ENST00000371142 WASHC2AQ641Q2 1341 aa26.57■■□□□ 1.84
TM9SF3-201ENST00000371142 ZFYVE27Q5T4F4 411 aa26.57■■□□□ 1.84
TM9SF3-201ENST00000371142 GAS2L2Q8NHY3 880 aa26.57■■□□□ 1.84
TM9SF3-201ENST00000371142 ESCO1Q5FWF5 840 aa26.57■■□□□ 1.84
TM9SF3-201ENST00000371142 PPP2R1AP30153 589 aa26.57■■□□□ 1.84
TM9SF3-201ENST00000371142 NEK4P51957 841 aa26.57■■□□□ 1.84
TM9SF3-201ENST00000371142 CAVIN1Q6NZI2 390 aaKnown RBP26.57■■□□□ 1.84
TM9SF3-201ENST00000371142 RRP12Q5JTH9 1297 aaKnown RBP26.56■■□□□ 1.84
TM9SF3-201ENST00000371142 STAC3Q96MF2 364 aa26.56■■□□□ 1.84
TM9SF3-201ENST00000371142 SART3Q15020 963 aaKnown RBP26.56■■□□□ 1.84
TM9SF3-201ENST00000371142 KIF6Q6ZMV9 814 aa26.56■■□□□ 1.84
TM9SF3-201ENST00000371142 PDZRN3Q9UPQ7 1066 aa26.56■■□□□ 1.84
TM9SF3-201ENST00000371142 CCDC39Q9UFE4 941 aa26.56■■□□□ 1.84
TM9SF3-201ENST00000371142 R3HCC1Q9Y3T6 440 aaKnown RBP26.55■■□□□ 1.84
TM9SF3-201ENST00000371142 IGF1RP08069 1367 aa26.55■■□□□ 1.84
TM9SF3-201ENST00000371142 TWISTNBQ3B726 338 aaPredicted RBP26.55■■□□□ 1.84
TM9SF3-201ENST00000371142 CAGE1Q8TC20 777 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms