RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 TROQ12816 1431 aaPredicted RBP11.06□□□□□ -0.64
SMARCA1-203ENST00000371123 FAM135AQ9P2D6 1515 aa11.06□□□□□ -0.64
SMARCA1-203ENST00000371123 NCLP19338 710 aaKnown RBP11.06□□□□□ -0.64
SMARCA1-203ENST00000371123 TSC1Q92574 1164 aa11.06□□□□□ -0.64
SMARCA1-203ENST00000371123 PDZRN3Q9UPQ7 1066 aa11.06□□□□□ -0.64
SMARCA1-203ENST00000371123 ELL2O00472 640 aaPredicted RBP11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 BECN1Q14457 450 aa11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 KIF2CQ99661 725 aa11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 RICTORQ6R327 1708 aa11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 NKTRP30414 1462 aaKnown RBP11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 AEBP2Q6ZN18 517 aaPredicted RBP11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 TAOK2Q9UL54 1235 aa11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 FRMPD1Q5SYB0 1578 aa11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 XPCQ01831 940 aaPredicted RBP11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 GOLGA2Q08379 1002 aa11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 BCL11BQ9C0K0 894 aaPredicted RBP11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 PPP2R1AP30153 589 aa11.04□□□□□ -0.64
SMARCA1-203ENST00000371123 STAC3Q96MF2 364 aa11.04□□□□□ -0.64
SMARCA1-203ENST00000371123 R3HCC1Q9Y3T6 440 aaKnown RBP11.04□□□□□ -0.64
SMARCA1-203ENST00000371123 PRDM15P57071 1507 aaPredicted RBP11.04□□□□□ -0.64
SMARCA1-203ENST00000371123 PRAG1Q86YV5 1406 aa11.04□□□□□ -0.64
SMARCA1-203ENST00000371123 ZNF710Q8N1W2 664 aa11.04□□□□□ -0.64
SMARCA1-203ENST00000371123 CHMP5Q9NZZ3 219 aa11.03□□□□□ -0.64
SMARCA1-203ENST00000371123 UPF2Q9HAU5 1272 aaKnown RBP11.03□□□□□ -0.64
SMARCA1-203ENST00000371123 STAG3Q9UJ98 1225 aa11.03□□□□□ -0.64
SMARCA1-203ENST00000371123 MYOM1P52179 1685 aa11.03□□□□□ -0.64
SMARCA1-203ENST00000371123 SMAP1Q8IYB5 467 aaPredicted RBP11.03□□□□□ -0.64
SMARCA1-203ENST00000371123 APAF1O14727 1248 aa11.03□□□□□ -0.64
SMARCA1-203ENST00000371123 NUTM2FA1L443 756 aa11.02□□□□□ -0.65
SMARCA1-203ENST00000371123 DMTNQ08495 405 aa11.02□□□□□ -0.65
SMARCA1-203ENST00000371123 ZSCAN30Q86W11 494 aa11.02□□□□□ -0.65
SMARCA1-203ENST00000371123 NEO1Q92859 1461 aa11.02□□□□□ -0.65
SMARCA1-203ENST00000371123 MAST1Q9Y2H9 1570 aa11.02□□□□□ -0.65
SMARCA1-203ENST00000371123 REREQ9P2R6 1566 aa11.02□□□□□ -0.65
SMARCA1-203ENST00000371123 AMER1Q5JTC6 1135 aaPredicted RBP11.02□□□□□ -0.65
SMARCA1-203ENST00000371123 ARHGEF5Q12774 1597 aa11.01□□□□□ -0.65
SMARCA1-203ENST00000371123 GGT6Q6P531 493 aa11.01□□□□□ -0.65
SMARCA1-203ENST00000371123 CHAMP1Q96JM3 812 aa11.01□□□□□ -0.65
SMARCA1-203ENST00000371123 PDE4CQ08493 712 aa11.01□□□□□ -0.65
SMARCA1-203ENST00000371123 PLXNC1O60486 1568 aa11.01□□□□□ -0.65
SMARCA1-203ENST00000371123 UQCRHLA0A096LP55 91 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 UQCRHP07919 91 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 MAPK8IP3Q9UPT6 1336 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 ZBTB22O15209 634 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 C22orf23Q9BZE7 217 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 TMEM51Q9NW97 253 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 ADGRL2O95490 1459 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 PLA2R1Q13018 1463 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 RAB3GAP1Q15042 981 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 FTSJ3Q8IY81 847 aaKnown RBP11□□□□□ -0.65
SMARCA1-203ENST00000371123 ABCC1P33527 1531 aa10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 MFAP1P55081 439 aaKnown RBP10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 ATP2B3Q16720 1220 aa10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 FOXD4L5Q5VV16 416 aaPredicted RBP10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 FOXD4L4Q8WXT5 416 aaPredicted RBP10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 RBSNQ9H1K0 784 aa10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 FAM177BA6PVY3 158 aa10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 SAMD9LQ8IVG5 1584 aa10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 FOXD4L6Q3SYB3 417 aaPredicted RBP10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 FOXD4L3Q6VB84 417 aaPredicted RBP10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 RBM42Q9BTD8 480 aaKnown RBP10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 A2MP01023 1474 aa10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 MLECQ14165 292 aa10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 TRAK1Q9UPV9 953 aa10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 GPRASP1Q5JY77 1395 aa10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 PDLIM2Q96JY6 352 aa10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 SHPRHQ149N8 1683 aa10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 ERBINQ96RT1 1412 aa10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 ZNF500O60304 480 aaPredicted RBP10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 SSFA2P28290 1259 aa10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 BBXQ8WY36 941 aaPredicted RBP10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 PLCH2O75038 1416 aa10.97□□□□□ -0.65
SMARCA1-203ENST00000371123 TERF1P54274 439 aa10.97□□□□□ -0.65
SMARCA1-203ENST00000371123 ZNF428Q96B54 188 aa10.97□□□□□ -0.65
SMARCA1-203ENST00000371123 INO80Q9ULG1 1556 aaPredicted RBP10.97□□□□□ -0.65
SMARCA1-203ENST00000371123 NASPP49321 788 aaPredicted RBP10.97□□□□□ -0.65
SMARCA1-203ENST00000371123 TMF1P82094 1093 aa10.97□□□□□ -0.65
SMARCA1-203ENST00000371123 LAMC1P11047 1609 aa10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 TRIM44Q96DX7 344 aaPredicted RBP10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 NOL7Q9UMY1 257 aaKnown RBP10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 GPATCH8Q9UKJ3 1502 aaKnown RBP10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 U2AF1L5P0DN76 240 aaPredicted RBP10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 U2AF1Q01081 240 aaKnown RBP eCLIP10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 CCDC173Q0VFZ6 552 aa10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 PKP1Q13835 747 aa10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 SMC5Q8IY18 1101 aa10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 ARHGAP31Q2M1Z3 1444 aa10.96□□□□□ -0.66
SMARCA1-203ENST00000371123 PDE3AQ14432 1141 aa10.95□□□□□ -0.66
SMARCA1-203ENST00000371123 NOL8Q76FK4 1167 aaKnown RBP10.95□□□□□ -0.66
SMARCA1-203ENST00000371123 CHMP4BQ9H444 224 aaKnown RBP10.95□□□□□ -0.66
SMARCA1-203ENST00000371123 NSFL1CQ9UNZ2 370 aaKnown RBP10.95□□□□□ -0.66
SMARCA1-203ENST00000371123 UTP14CQ5TAP6 766 aaKnown RBP10.95□□□□□ -0.66
SMARCA1-203ENST00000371123 DDX11L8A8MPP1 907 aa10.95□□□□□ -0.66
SMARCA1-203ENST00000371123 ZNF830Q96NB3 372 aaPredicted RBP10.94□□□□□ -0.66
SMARCA1-203ENST00000371123 RARSP54136 660 aaKnown RBP10.94□□□□□ -0.66
SMARCA1-203ENST00000371123 GAS2L2Q8NHY3 880 aa10.94□□□□□ -0.66
SMARCA1-203ENST00000371123 ANKRD50Q9ULJ7 1429 aa10.94□□□□□ -0.66
SMARCA1-203ENST00000371123 RNF17Q9BXT8 1623 aaKnown RBP10.94□□□□□ -0.66
SMARCA1-203ENST00000371123 CGNL1Q0VF96 1302 aa10.94□□□□□ -0.66
SMARCA1-203ENST00000371123 ZMYM3Q14202 1370 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 1241.4 ms