RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 TRPC5Q9UL62 973 aaPredicted RBP15.51■□□□□ 0.07
EXOSC1-203ENST00000370886 LAMC1P11047 1609 aa15.5■□□□□ 0.07
EXOSC1-203ENST00000370886 USP21Q9UK80 565 aa15.5■□□□□ 0.07
EXOSC1-203ENST00000370886 KDM2AQ9Y2K7 1162 aa15.5■□□□□ 0.07
EXOSC1-203ENST00000370886 PTCH1Q13635 1447 aa15.5■□□□□ 0.07
EXOSC1-203ENST00000370886 DDX17Q92841 729 aaKnown RBP15.49■□□□□ 0.07
EXOSC1-203ENST00000370886 EP400Q96L91 3159 aa15.48■□□□□ 0.07
EXOSC1-203ENST00000370886 METP08581 1390 aa15.48■□□□□ 0.07
EXOSC1-203ENST00000370886 C1orf167Q5SNV9 1468 aa15.47■□□□□ 0.07
EXOSC1-203ENST00000370886 VGFO15240 615 aaPredicted RBP15.47■□□□□ 0.07
EXOSC1-203ENST00000370886 CCDC125Q86Z20 511 aa15.47■□□□□ 0.07
EXOSC1-203ENST00000370886 RPGRIP1LQ68CZ1 1315 aa15.46■□□□□ 0.07
EXOSC1-203ENST00000370886 ATRNO75882 1429 aa15.46■□□□□ 0.07
EXOSC1-203ENST00000370886 DCAF11Q8TEB1 546 aa15.46■□□□□ 0.07
EXOSC1-203ENST00000370886 SOS2Q07890 1332 aaPredicted RBP15.45■□□□□ 0.06
EXOSC1-203ENST00000370886 SPATA31E1Q6ZUB1 1445 aa15.45■□□□□ 0.06
EXOSC1-203ENST00000370886 FNBP4Q8N3X1 1017 aaPredicted RBP15.45■□□□□ 0.06
EXOSC1-203ENST00000370886 COL22A1Q8NFW1 1626 aaPredicted RBP15.44■□□□□ 0.06
EXOSC1-203ENST00000370886 ADGRF5Q8IZF2 1346 aa15.43■□□□□ 0.06
EXOSC1-203ENST00000370886 NEXMIFQ5QGS0 1516 aa15.42■□□□□ 0.06
EXOSC1-203ENST00000370886 MARF1Q9Y4F3 1742 aaKnown RBP15.41■□□□□ 0.06
EXOSC1-203ENST00000370886 L3MBTL2Q969R5 705 aa15.4■□□□□ 0.06
EXOSC1-203ENST00000370886 MYOM2P54296 1465 aa15.4■□□□□ 0.06
EXOSC1-203ENST00000370886 KIF1BO60333 1816 aa15.39■□□□□ 0.05
EXOSC1-203ENST00000370886 ORAI2Q96SN7 254 aa15.39■□□□□ 0.05
EXOSC1-203ENST00000370886 TONSLQ96HA7 1378 aa15.38■□□□□ 0.05
EXOSC1-203ENST00000370886 PRAG1Q86YV5 1406 aa15.38■□□□□ 0.05
EXOSC1-203ENST00000370886 NPHP3Q7Z494 1330 aa15.38■□□□□ 0.05
EXOSC1-203ENST00000370886 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.37■□□□□ 0.05
EXOSC1-203ENST00000370886 BLMP54132 1417 aaPredicted RBP15.36■□□□□ 0.05
EXOSC1-203ENST00000370886 BCL9LQ86UU0 1499 aa15.36■□□□□ 0.05
EXOSC1-203ENST00000370886 GJD4Q96KN9 370 aaPredicted RBP15.36■□□□□ 0.05
EXOSC1-203ENST00000370886 ROBO2Q9HCK4 1378 aa15.36■□□□□ 0.05
EXOSC1-203ENST00000370886 CFAP70Q5T0N1 1121 aa15.35■□□□□ 0.05
EXOSC1-203ENST00000370886 STK26Q9P289 416 aa15.35■□□□□ 0.05
EXOSC1-203ENST00000370886 CDC42BPGQ6DT37 1551 aa15.34■□□□□ 0.05
EXOSC1-203ENST00000370886 TMEM132EQ6IEE7 984 aa15.34■□□□□ 0.05
EXOSC1-203ENST00000370886 LRP5O75197 1615 aa15.34■□□□□ 0.05
EXOSC1-203ENST00000370886 SF3B2Q13435 895 aaKnown RBP15.33■□□□□ 0.04
EXOSC1-203ENST00000370886 LRPPRCP42704 1394 aaKnown RBP15.33■□□□□ 0.04
EXOSC1-203ENST00000370886 PXDNQ92626 1479 aa15.33■□□□□ 0.04
EXOSC1-203ENST00000370886 CLSPNQ9HAW4 1339 aa15.32■□□□□ 0.04
EXOSC1-203ENST00000370886 ESCO1Q5FWF5 840 aa15.31■□□□□ 0.04
EXOSC1-203ENST00000370886 STAC3Q96MF2 364 aa15.31■□□□□ 0.04
EXOSC1-203ENST00000370886 C14orf93Q9H972 538 aaKnown RBP15.31■□□□□ 0.04
EXOSC1-203ENST00000370886 GLI3P10071 1580 aa15.3■□□□□ 0.04
EXOSC1-203ENST00000370886 RALGAPBQ86X10 1494 aa15.3■□□□□ 0.04
EXOSC1-203ENST00000370886 BRWD3Q6RI45 1802 aa15.29■□□□□ 0.04
EXOSC1-203ENST00000370886 PIK3C2GO75747 1445 aa15.29■□□□□ 0.04
EXOSC1-203ENST00000370886 UNC5CLQ8IV45 518 aa15.29■□□□□ 0.04
EXOSC1-203ENST00000370886 SLIT2O94813 1529 aa15.28■□□□□ 0.04
EXOSC1-203ENST00000370886 FOXO3O43524 673 aa15.27■□□□□ 0.04
EXOSC1-203ENST00000370886 DEFB132Q7Z7B7 95 aa15.27■□□□□ 0.04
EXOSC1-203ENST00000370886 USP32Q8NFA0 1604 aa15.27■□□□□ 0.03
EXOSC1-203ENST00000370886 PPLO60437 1756 aa15.26■□□□□ 0.03
EXOSC1-203ENST00000370886 XPCQ01831 940 aaPredicted RBP15.26■□□□□ 0.03
EXOSC1-203ENST00000370886 NBPF1Q3BBV0 1214 aa15.26■□□□□ 0.03
EXOSC1-203ENST00000370886 NBPF8Q3BBV2 869 aa15.26■□□□□ 0.03
EXOSC1-203ENST00000370886 KIF1AQ12756 1690 aa15.25■□□□□ 0.03
EXOSC1-203ENST00000370886 TRAK1Q9UPV9 953 aa15.25■□□□□ 0.03
EXOSC1-203ENST00000370886 NRXN1Q9ULB1 1477 aa15.25■□□□□ 0.03
EXOSC1-203ENST00000370886 NWD2Q9ULI1 1742 aa15.23■□□□□ 0.03
EXOSC1-203ENST00000370886 SAFB2Q14151 953 aaKnown RBP eCLIP15.23■□□□□ 0.03
EXOSC1-203ENST00000370886 SEPT12Q8IYM1 358 aa15.23■□□□□ 0.03
EXOSC1-203ENST00000370886 SPATA31A3Q5VYP0 1347 aa15.22■□□□□ 0.03
EXOSC1-203ENST00000370886 HAP1P54257 671 aaPredicted RBP15.22■□□□□ 0.03
EXOSC1-203ENST00000370886 WAPLQ7Z5K2 1190 aa15.22■□□□□ 0.03
EXOSC1-203ENST00000370886 POGKQ9P215 609 aa15.22■□□□□ 0.03
EXOSC1-203ENST00000370886 TIMELESSQ9UNS1 1208 aa15.22■□□□□ 0.03
EXOSC1-203ENST00000370886 IFT172Q9UG01 1749 aa15.21■□□□□ 0.03
EXOSC1-203ENST00000370886 BAG6P46379 1132 aa15.21■□□□□ 0.03
EXOSC1-203ENST00000370886 PLCH1Q4KWH8 1693 aa15.21■□□□□ 0.03
EXOSC1-203ENST00000370886 TECPR2O15040 1411 aa15.2■□□□□ 0.02
EXOSC1-203ENST00000370886 YTHDC2Q9H6S0 1430 aaKnown RBP15.2■□□□□ 0.02
EXOSC1-203ENST00000370886 VPS72Q15906 364 aa15.2■□□□□ 0.02
EXOSC1-203ENST00000370886 ROCK2O75116 1388 aaKnown RBP15.2■□□□□ 0.02
EXOSC1-203ENST00000370886 KNDC1Q76NI1 1749 aa15.2■□□□□ 0.02
EXOSC1-203ENST00000370886 FMN2Q9NZ56 1722 aa15.2■□□□□ 0.02
EXOSC1-203ENST00000370886 NUTM2FA1L443 756 aa15.19■□□□□ 0.02
EXOSC1-203ENST00000370886 KRT27Q7Z3Y8 459 aa15.19■□□□□ 0.02
EXOSC1-203ENST00000370886 PRAM1Q96QH2 718 aa15.19■□□□□ 0.02
EXOSC1-203ENST00000370886 CCDC9Q9Y3X0 531 aaKnown RBP15.19■□□□□ 0.02
EXOSC1-203ENST00000370886 TNS3Q68CZ2 1445 aa15.18■□□□□ 0.02
EXOSC1-203ENST00000370886 CARD11Q9BXL7 1154 aa15.18■□□□□ 0.02
EXOSC1-203ENST00000370886 ABCC11Q96J66 1382 aa15.17■□□□□ 0.02
EXOSC1-203ENST00000370886 A0A0G2JS52 829 aa15.17■□□□□ 0.02
EXOSC1-203ENST00000370886 PSDA5PKW4 1024 aaPredicted RBP15.17■□□□□ 0.02
EXOSC1-203ENST00000370886 ONECUT3O60422 494 aaPredicted RBP15.17■□□□□ 0.02
EXOSC1-203ENST00000370886 MYT1Q01538 1121 aa15.17■□□□□ 0.02
EXOSC1-203ENST00000370886 PLEKHH1Q9ULM0 1364 aa15.16■□□□□ 0.02
EXOSC1-203ENST00000370886 KRT28Q7Z3Y7 464 aa15.16■□□□□ 0.02
EXOSC1-203ENST00000370886 ABCA3Q99758 1704 aa15.16■□□□□ 0.02
EXOSC1-203ENST00000370886 RGPD1P0DJD0 1748 aa15.15■□□□□ 0.02
EXOSC1-203ENST00000370886 PSME1Q06323 249 aa15.15■□□□□ 0.02
EXOSC1-203ENST00000370886 ARHGEF10O15013 1369 aa15.14■□□□□ 0.01
EXOSC1-203ENST00000370886 HIRIP3Q9BW71 556 aaPredicted RBP15.14■□□□□ 0.01
EXOSC1-203ENST00000370886 MINK1Q8N4C8 1332 aaPredicted RBP15.14■□□□□ 0.01
EXOSC1-203ENST00000370886 ADGRB1O14514 1584 aa15.13■□□□□ 0.01
EXOSC1-203ENST00000370886 SBNO1A3KN83 1393 aa15.12■□□□□ 0.01
EXOSC1-203ENST00000370886 SIRT1Q96EB6 747 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms