RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 KNDC1Q76NI1 1749 aa16.22■□□□□ 0.19
EXOSC1-202ENST00000370885 YTHDC2Q9H6S0 1430 aaKnown RBP16.22■□□□□ 0.19
EXOSC1-202ENST00000370885 LAMC1P11047 1609 aa16.22■□□□□ 0.19
EXOSC1-202ENST00000370885 SPATA31A6Q5VVP1 1343 aa16.2■□□□□ 0.18
EXOSC1-202ENST00000370885 DHX57Q6P158 1386 aaKnown RBP16.2■□□□□ 0.18
EXOSC1-202ENST00000370885 CDC42BPGQ6DT37 1551 aa16.2■□□□□ 0.18
EXOSC1-202ENST00000370885 PNPLA6Q8IY17 1366 aa16.18■□□□□ 0.18
EXOSC1-202ENST00000370885 NUTM2FA1L443 756 aa16.18■□□□□ 0.18
EXOSC1-202ENST00000370885 NUTM2BA6NNL0 878 aaPredicted RBP16.18■□□□□ 0.18
EXOSC1-202ENST00000370885 NUTM2EB1AL46 878 aaPredicted RBP16.18■□□□□ 0.18
EXOSC1-202ENST00000370885 NUTM2AQ8IVF1 878 aaPredicted RBP16.18■□□□□ 0.18
EXOSC1-202ENST00000370885 SOS2Q07890 1332 aaPredicted RBP16.18■□□□□ 0.18
EXOSC1-202ENST00000370885 ADGRB1O14514 1584 aa16.17■□□□□ 0.18
EXOSC1-202ENST00000370885 LRRC59Q96AG4 307 aaKnown RBP16.17■□□□□ 0.18
EXOSC1-202ENST00000370885 KDM2AQ9Y2K7 1162 aa16.17■□□□□ 0.18
EXOSC1-202ENST00000370885 DCAF11Q8TEB1 546 aa16.16■□□□□ 0.18
EXOSC1-202ENST00000370885 ESCO1Q5FWF5 840 aa16.15■□□□□ 0.18
EXOSC1-202ENST00000370885 SIRT1Q96EB6 747 aa16.15■□□□□ 0.18
EXOSC1-202ENST00000370885 FMN2Q9NZ56 1722 aa16.15■□□□□ 0.18
EXOSC1-202ENST00000370885 RGPD8O14715 1765 aaPredicted RBP16.13■□□□□ 0.17
EXOSC1-202ENST00000370885 XPCQ01831 940 aaPredicted RBP16.13■□□□□ 0.17
EXOSC1-202ENST00000370885 SAFB2Q14151 953 aaKnown RBP eCLIP16.13■□□□□ 0.17
EXOSC1-202ENST00000370885 PRAM1Q96QH2 718 aa16.13■□□□□ 0.17
EXOSC1-202ENST00000370885 PXDNQ92626 1479 aa16.13■□□□□ 0.17
EXOSC1-202ENST00000370885 FOXO3O43524 673 aa16.12■□□□□ 0.17
EXOSC1-202ENST00000370885 MEX3CQ5U5Q3 659 aaKnown RBP16.12■□□□□ 0.17
EXOSC1-202ENST00000370885 DLC1Q96QB1 1528 aa16.1■□□□□ 0.17
EXOSC1-202ENST00000370885 TRAK1Q9UPV9 953 aa16.09■□□□□ 0.17
EXOSC1-202ENST00000370885 AFF2P51816 1311 aa16.09■□□□□ 0.17
EXOSC1-202ENST00000370885 USP32Q8NFA0 1604 aa16.08■□□□□ 0.17
EXOSC1-202ENST00000370885 COL22A1Q8NFW1 1626 aaPredicted RBP16.08■□□□□ 0.16
EXOSC1-202ENST00000370885 ADAMTS2O95450 1211 aa16.07■□□□□ 0.16
EXOSC1-202ENST00000370885 NPHP3Q7Z494 1330 aa16.07■□□□□ 0.16
EXOSC1-202ENST00000370885 ZNF772Q68DY9 489 aaPredicted RBP16.06■□□□□ 0.16
EXOSC1-202ENST00000370885 C8orf37Q96NL8 207 aa16.06■□□□□ 0.16
EXOSC1-202ENST00000370885 HIRIP3Q9BW71 556 aaPredicted RBP16.06■□□□□ 0.16
EXOSC1-202ENST00000370885 POGKQ9P215 609 aa16.05■□□□□ 0.16
EXOSC1-202ENST00000370885 ADGRB2O60241 1585 aa16.04■□□□□ 0.16
EXOSC1-202ENST00000370885 MINK1Q8N4C8 1332 aaPredicted RBP16.04■□□□□ 0.16
EXOSC1-202ENST00000370885 PRR36Q9H6K5 1346 aa16.04■□□□□ 0.16
EXOSC1-202ENST00000370885 ARHGEF28Q8N1W1 1705 aaKnown RBP16.03■□□□□ 0.16
EXOSC1-202ENST00000370885 KIF1AQ12756 1690 aa16.03■□□□□ 0.16
EXOSC1-202ENST00000370885 NBPF1Q3BBV0 1214 aa16.03■□□□□ 0.16
EXOSC1-202ENST00000370885 STAC3Q96MF2 364 aa16.03■□□□□ 0.16
EXOSC1-202ENST00000370885 SIN3AQ96ST3 1273 aa16.03■□□□□ 0.16
EXOSC1-202ENST00000370885 PHF8Q9UPP1 1060 aa16.03■□□□□ 0.16
EXOSC1-202ENST00000370885 SPATA31A3Q5VYP0 1347 aa16.02■□□□□ 0.16
EXOSC1-202ENST00000370885 KRT28Q7Z3Y7 464 aa16.02■□□□□ 0.16
EXOSC1-202ENST00000370885 PMFBP1Q8TBY8 1022 aa16.01■□□□□ 0.15
EXOSC1-202ENST00000370885 NGLY1Q96IV0 654 aa16.01■□□□□ 0.15
EXOSC1-202ENST00000370885 RXRBP28702 533 aa16■□□□□ 0.15
EXOSC1-202ENST00000370885 QTRT2Q9H974 415 aaKnown RBP16■□□□□ 0.15
EXOSC1-202ENST00000370885 FNBP4Q8N3X1 1017 aaPredicted RBP15.99■□□□□ 0.15
EXOSC1-202ENST00000370885 ANKARQ7Z5J8 1434 aa15.99■□□□□ 0.15
EXOSC1-202ENST00000370885 MARF1Q9Y4F3 1742 aaKnown RBP15.99■□□□□ 0.15
EXOSC1-202ENST00000370885 WASLO00401 505 aaPredicted RBP15.98■□□□□ 0.15
EXOSC1-202ENST00000370885 L3MBTL2Q969R5 705 aa15.98■□□□□ 0.15
EXOSC1-202ENST00000370885 KIAA1210Q9ULL0 1709 aa15.98■□□□□ 0.15
EXOSC1-202ENST00000370885 CABLES1Q8TDN4 633 aa15.97■□□□□ 0.15
EXOSC1-202ENST00000370885 TULP4Q9NRJ4 1543 aa15.97■□□□□ 0.15
EXOSC1-202ENST00000370885 BCL9LQ86UU0 1499 aa15.97■□□□□ 0.15
EXOSC1-202ENST00000370885 RGS12O14924 1447 aa15.96■□□□□ 0.15
EXOSC1-202ENST00000370885 USP21Q9UK80 565 aa15.96■□□□□ 0.15
EXOSC1-202ENST00000370885 TRPM3Q9HCF6 1732 aaPredicted RBP15.96■□□□□ 0.15
EXOSC1-202ENST00000370885 CDK12Q9NYV4 1490 aaPredicted RBP15.96■□□□□ 0.14
EXOSC1-202ENST00000370885 TNS3Q68CZ2 1445 aa15.95■□□□□ 0.14
EXOSC1-202ENST00000370885 ATRNO75882 1429 aa15.94■□□□□ 0.14
EXOSC1-202ENST00000370885 PLEKHG5O94827 1062 aa15.94■□□□□ 0.14
EXOSC1-202ENST00000370885 RBM6P78332 1123 aaKnown RBP15.94■□□□□ 0.14
EXOSC1-202ENST00000370885 SBNO1A3KN83 1393 aa15.94■□□□□ 0.14
EXOSC1-202ENST00000370885 ABCA3Q99758 1704 aa15.94■□□□□ 0.14
EXOSC1-202ENST00000370885 ATP7BP35670 1465 aa15.93■□□□□ 0.14
EXOSC1-202ENST00000370885 PSME1Q06323 249 aa15.93■□□□□ 0.14
EXOSC1-202ENST00000370885 NEUROD1Q13562 356 aa15.93■□□□□ 0.14
EXOSC1-202ENST00000370885 UPF1Q92900 1129 aaKnown RBP eCLIP15.93■□□□□ 0.14
EXOSC1-202ENST00000370885 NUDT16Q96DE0 195 aaKnown RBP15.92■□□□□ 0.14
EXOSC1-202ENST00000370885 CDK19Q9BWU1 502 aa15.92■□□□□ 0.14
EXOSC1-202ENST00000370885 ALS2Q96Q42 1657 aa15.92■□□□□ 0.14
EXOSC1-202ENST00000370885 SLIT2O94813 1529 aa15.91■□□□□ 0.14
EXOSC1-202ENST00000370885 TRPC5Q9UL62 973 aaPredicted RBP15.9■□□□□ 0.14
EXOSC1-202ENST00000370885 NBPF8Q3BBV2 869 aa15.89■□□□□ 0.13
EXOSC1-202ENST00000370885 LMOD2Q6P5Q4 547 aa15.89■□□□□ 0.13
EXOSC1-202ENST00000370885 TRPM1Q7Z4N2 1603 aa15.89■□□□□ 0.13
EXOSC1-202ENST00000370885 TOPAZ1Q8N9V7 1692 aa15.89■□□□□ 0.13
EXOSC1-202ENST00000370885 EP400Q96L91 3159 aa15.88■□□□□ 0.13
EXOSC1-202ENST00000370885 CRYBG1Q9Y4K1 1723 aa15.88■□□□□ 0.13
EXOSC1-202ENST00000370885 EIF3AQ14152 1382 aaKnown RBP15.87■□□□□ 0.13
EXOSC1-202ENST00000370885 FAM83GA6ND36 823 aa15.87■□□□□ 0.13
EXOSC1-202ENST00000370885 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.87■□□□□ 0.13
EXOSC1-202ENST00000370885 GLI3P10071 1580 aa15.87■□□□□ 0.13
EXOSC1-202ENST00000370885 ARHGEF10O15013 1369 aa15.87■□□□□ 0.13
EXOSC1-202ENST00000370885 UNC5CLQ8IV45 518 aa15.86■□□□□ 0.13
EXOSC1-202ENST00000370885 NGDNQ8NEJ9 315 aaKnown RBP15.86■□□□□ 0.13
EXOSC1-202ENST00000370885 PLCH1Q4KWH8 1693 aa15.86■□□□□ 0.13
EXOSC1-202ENST00000370885 ITSN1Q15811 1721 aa15.85■□□□□ 0.13
EXOSC1-202ENST00000370885 GJD4Q96KN9 370 aaPredicted RBP15.85■□□□□ 0.13
EXOSC1-202ENST00000370885 CENPJQ9HC77 1338 aaPredicted RBP15.85■□□□□ 0.13
EXOSC1-202ENST00000370885 QRICH2Q9H0J4 1663 aa15.85■□□□□ 0.13
EXOSC1-202ENST00000370885 GPRASP1Q5JY77 1395 aa15.85■□□□□ 0.13
EXOSC1-202ENST00000370885 PLEKHG3A1L390 1219 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms