RNA–Protein interactions for RNA: ENST00000370128.8

RTCA-203, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCA, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-203ENST00000370128 ABCC3O15438 1527 aa22.56■■□□□ 1.2
RTCA-203ENST00000370128 ADGRB1O14514 1584 aa22.56■■□□□ 1.2
RTCA-203ENST00000370128 SLFN5Q08AF3 891 aa22.55■■□□□ 1.2
RTCA-203ENST00000370128 TRAK1Q9UPV9 953 aa22.55■■□□□ 1.2
RTCA-203ENST00000370128 APAF1O14727 1248 aa22.53■■□□□ 1.2
RTCA-203ENST00000370128 TRMT2AQ8IZ69 625 aaKnown RBP22.53■■□□□ 1.2
RTCA-203ENST00000370128 ZC3H13Q5T200 1668 aaKnown RBP22.52■■□□□ 1.2
RTCA-203ENST00000370128 RPGRIP1LQ68CZ1 1315 aa22.52■■□□□ 1.2
RTCA-203ENST00000370128 MS4A1P11836 297 aa22.51■■□□□ 1.19
RTCA-203ENST00000370128 QRICH2Q9H0J4 1663 aa22.51■■□□□ 1.19
RTCA-203ENST00000370128 HSP90AA1P07900 732 aaKnown RBP22.51■■□□□ 1.19
RTCA-203ENST00000370128 TMEM132EQ6IEE7 984 aa22.51■■□□□ 1.19
RTCA-203ENST00000370128 CAMSAP1Q5T5Y3 1602 aa22.5■■□□□ 1.19
RTCA-203ENST00000370128 PDE4AP27815 886 aa22.5■■□□□ 1.19
RTCA-203ENST00000370128 NPM2Q86SE8 214 aaKnown RBP22.5■■□□□ 1.19
RTCA-203ENST00000370128 SPINK5Q9NQ38 1064 aaPredicted RBP22.5■■□□□ 1.19
RTCA-203ENST00000370128 RAPGEF3O95398 923 aa22.49■■□□□ 1.19
RTCA-203ENST00000370128 SIGLEC1Q9BZZ2 1709 aa22.49■■□□□ 1.19
RTCA-203ENST00000370128 POLR3AO14802 1390 aaPredicted RBP22.49■■□□□ 1.19
RTCA-203ENST00000370128 NEO1Q92859 1461 aa22.49■■□□□ 1.19
RTCA-203ENST00000370128 NSD3Q9BZ95 1437 aa22.49■■□□□ 1.19
RTCA-203ENST00000370128 NFKBIBQ15653 356 aa22.49■■□□□ 1.19
RTCA-203ENST00000370128 BACH2Q9BYV9 841 aa22.48■■□□□ 1.19
RTCA-203ENST00000370128 SLC12A5Q9H2X9 1139 aa22.48■■□□□ 1.19
RTCA-203ENST00000370128 RRAGDQ9NQL2 400 aaPredicted RBP22.47■■□□□ 1.19
RTCA-203ENST00000370128 PIK3C2BO00750 1634 aa22.46■■□□□ 1.19
RTCA-203ENST00000370128 NKTRP30414 1462 aaKnown RBP22.45■■□□□ 1.18
RTCA-203ENST00000370128 KDM2BQ8NHM5 1336 aa22.45■■□□□ 1.18
RTCA-203ENST00000370128 PDIA4P13667 645 aaKnown RBP22.45■■□□□ 1.18
RTCA-203ENST00000370128 NGEFQ8N5V2 710 aa22.45■■□□□ 1.18
RTCA-203ENST00000370128 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.45■■□□□ 1.18
RTCA-203ENST00000370128 DIP2CQ9Y2E4 1556 aa22.44■■□□□ 1.18
RTCA-203ENST00000370128 SKAP1Q86WV1 359 aa22.43■■□□□ 1.18
RTCA-203ENST00000370128 E9PSI1 815 aa22.43■■□□□ 1.18
RTCA-203ENST00000370128 GLI2P10070 1586 aa22.43■■□□□ 1.18
RTCA-203ENST00000370128 MORC1Q86VD1 984 aa22.42■■□□□ 1.18
RTCA-203ENST00000370128 DMRT2Q9Y5R5 561 aa22.42■■□□□ 1.18
RTCA-203ENST00000370128 NEXMIFQ5QGS0 1516 aa22.42■■□□□ 1.18
RTCA-203ENST00000370128 VGFO15240 615 aaPredicted RBP22.41■■□□□ 1.18
RTCA-203ENST00000370128 NUTM2DQ5VT03 806 aaPredicted RBP22.41■■□□□ 1.18
RTCA-203ENST00000370128 SHPRHQ149N8 1683 aa22.4■■□□□ 1.18
RTCA-203ENST00000370128 NAP1L5Q96NT1 182 aaPredicted RBP22.4■■□□□ 1.18
RTCA-203ENST00000370128 ARHGAP31Q2M1Z3 1444 aa22.4■■□□□ 1.18
RTCA-203ENST00000370128 USP32Q8NFA0 1604 aa22.39■■□□□ 1.18
RTCA-203ENST00000370128 TNNT2P45379 298 aaPredicted RBP22.38■■□□□ 1.17
RTCA-203ENST00000370128 CENPQQ7L2Z9 268 aaPredicted RBP22.38■■□□□ 1.17
RTCA-203ENST00000370128 ARHGEF28Q8N1W1 1705 aaKnown RBP22.38■■□□□ 1.17
RTCA-203ENST00000370128 RICTORQ6R327 1708 aa22.38■■□□□ 1.17
RTCA-203ENST00000370128 TULP4Q9NRJ4 1543 aa22.37■■□□□ 1.17
RTCA-203ENST00000370128 BCAR3O75815 825 aa22.37■■□□□ 1.17
RTCA-203ENST00000370128 WWC1Q8IX03 1113 aa22.37■■□□□ 1.17
RTCA-203ENST00000370128 PUS7Q96PZ0 661 aaKnown RBP22.37■■□□□ 1.17
RTCA-203ENST00000370128 IDI1Q13907 227 aa22.36■■□□□ 1.17
RTCA-203ENST00000370128 CGNL1Q0VF96 1302 aa22.36■■□□□ 1.17
RTCA-203ENST00000370128 EVC2Q86UK5 1308 aa22.36■■□□□ 1.17
RTCA-203ENST00000370128 YEATS2Q9ULM3 1422 aa22.34■■□□□ 1.17
RTCA-203ENST00000370128 BCL11BQ9C0K0 894 aaPredicted RBP22.34■■□□□ 1.17
RTCA-203ENST00000370128 PRDM4Q9UKN5 801 aa22.33■■□□□ 1.17
RTCA-203ENST00000370128 ANKRD36BQ8N2N9 1353 aa22.33■■□□□ 1.17
RTCA-203ENST00000370128 MTHFSP49914 203 aa22.32■■□□□ 1.16
RTCA-203ENST00000370128 DDRGK1Q96HY6 314 aa22.32■■□□□ 1.16
RTCA-203ENST00000370128 ZFYVE9O95405 1425 aa22.32■■□□□ 1.16
RTCA-203ENST00000370128 RUNDC1Q96C34 613 aa22.32■■□□□ 1.16
RTCA-203ENST00000370128 CALD1Q05682 793 aaKnown RBP22.31■■□□□ 1.16
RTCA-203ENST00000370128 SLC52A1Q9NWF4 448 aa22.31■■□□□ 1.16
RTCA-203ENST00000370128 IQSEC2Q5JU85 1478 aa22.31■■□□□ 1.16
RTCA-203ENST00000370128 PNNQ9H307 717 aaKnown RBP22.3■■□□□ 1.16
RTCA-203ENST00000370128 CABP2Q9NPB3 220 aa22.29■■□□□ 1.16
RTCA-203ENST00000370128 TCP11L2Q8N4U5 519 aa22.29■■□□□ 1.16
RTCA-203ENST00000370128 PHF23Q9BUL5 403 aaPredicted RBP22.29■■□□□ 1.16
RTCA-203ENST00000370128 NSD2O96028 1365 aa22.28■■□□□ 1.16
RTCA-203ENST00000370128 NEUROD2Q15784 382 aa22.28■■□□□ 1.16
RTCA-203ENST00000370128 RRP7AQ9Y3A4 280 aaKnown RBP22.28■■□□□ 1.16
RTCA-203ENST00000370128 SAFB2Q14151 953 aaKnown RBP eCLIP22.27■■□□□ 1.16
RTCA-203ENST00000370128 MYO5BQ9ULV0 1848 aa22.26■■□□□ 1.15
RTCA-203ENST00000370128 CFAP53Q96M91 514 aa22.26■■□□□ 1.15
RTCA-203ENST00000370128 PDE3AQ14432 1141 aa22.26■■□□□ 1.15
RTCA-203ENST00000370128 PREX1Q8TCU6 1659 aa22.25■■□□□ 1.15
RTCA-203ENST00000370128 TMEM131LA2VDJ0 1609 aa22.25■■□□□ 1.15
RTCA-203ENST00000370128 STK26Q9P289 416 aa22.24■■□□□ 1.15
RTCA-203ENST00000370128 CLCN1P35523 988 aa22.23■■□□□ 1.15
RTCA-203ENST00000370128 NINLQ9Y2I6 1382 aa22.23■■□□□ 1.15
RTCA-203ENST00000370128 WDR63Q8IWG1 891 aa22.23■■□□□ 1.15
RTCA-203ENST00000370128 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
RTCA-203ENST00000370128 A0A1W2PP64 1363 aa22.22■■□□□ 1.15
RTCA-203ENST00000370128 CCDC27Q2M243 656 aa22.22■■□□□ 1.15
RTCA-203ENST00000370128 PTPRMP28827 1452 aa22.22■■□□□ 1.15
RTCA-203ENST00000370128 ABCC11Q96J66 1382 aa22.21■■□□□ 1.15
RTCA-203ENST00000370128 SRPK2P78362 688 aaKnown RBP22.2■■□□□ 1.14
RTCA-203ENST00000370128 FAM161AQ3B820 660 aa22.2■■□□□ 1.14
RTCA-203ENST00000370128 C8orf34Q49A92 452 aa22.2■■□□□ 1.14
RTCA-203ENST00000370128 RARSP54136 660 aaKnown RBP22.19■■□□□ 1.14
RTCA-203ENST00000370128 PANK1Q8TE04 598 aa22.19■■□□□ 1.14
RTCA-203ENST00000370128 IGHDP01880 384 aa22.18■■□□□ 1.14
RTCA-203ENST00000370128 CANXP27824 592 aaKnown RBP22.18■■□□□ 1.14
RTCA-203ENST00000370128 PDCL3Q9H2J4 239 aa22.18■■□□□ 1.14
RTCA-203ENST00000370128 U2AF1L5P0DN76 240 aaPredicted RBP22.18■■□□□ 1.14
RTCA-203ENST00000370128 U2AF1Q01081 240 aaKnown RBP eCLIP22.18■■□□□ 1.14
RTCA-203ENST00000370128 NCBP3Q53F19 620 aaKnown RBP22.18■■□□□ 1.14
RTCA-203ENST00000370128 FBXO31Q5XUX0 539 aaPredicted RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms