RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 SIGLEC1Q9BZZ2 1709 aa22.44■■□□□ 1.18
CHTOP-203ENST00000368690 IQGAP1P46940 1657 aa22.44■■□□□ 1.18
CHTOP-203ENST00000368690 KNSTRNQ9Y448 316 aa22.44■■□□□ 1.18
CHTOP-203ENST00000368690 ZC3H13Q5T200 1668 aaKnown RBP22.44■■□□□ 1.18
CHTOP-203ENST00000368690 AMER1Q5JTC6 1135 aaPredicted RBP22.43■■□□□ 1.18
CHTOP-203ENST00000368690 ASXL1Q8IXJ9 1541 aa22.43■■□□□ 1.18
CHTOP-203ENST00000368690 L1TD1Q5T7N2 865 aaKnown RBP22.43■■□□□ 1.18
CHTOP-203ENST00000368690 AGLP35573 1532 aa22.43■■□□□ 1.18
CHTOP-203ENST00000368690 CHGAP10645 457 aaKnown RBP22.42■■□□□ 1.18
CHTOP-203ENST00000368690 CGNL1Q0VF96 1302 aa22.42■■□□□ 1.18
CHTOP-203ENST00000368690 CDCA8Q53HL2 280 aa22.41■■□□□ 1.18
CHTOP-203ENST00000368690 PDE3AQ14432 1141 aa22.4■■□□□ 1.18
CHTOP-203ENST00000368690 ESF1Q9H501 851 aaKnown RBP22.4■■□□□ 1.18
CHTOP-203ENST00000368690 EIF5BO60841 1220 aaKnown RBP22.39■■□□□ 1.17
CHTOP-203ENST00000368690 E9PSI1 815 aa22.38■■□□□ 1.17
CHTOP-203ENST00000368690 NLRP1Q9C000 1473 aa22.38■■□□□ 1.17
CHTOP-203ENST00000368690 AAMPQ13685 434 aa22.38■■□□□ 1.17
CHTOP-203ENST00000368690 KIF1BO60333 1816 aa22.36■■□□□ 1.17
CHTOP-203ENST00000368690 MADDQ8WXG6 1647 aa22.35■■□□□ 1.17
CHTOP-203ENST00000368690 CLTCQ00610 1675 aaKnown RBP22.35■■□□□ 1.17
CHTOP-203ENST00000368690 ARHGAP31Q2M1Z3 1444 aa22.34■■□□□ 1.17
CHTOP-203ENST00000368690 IGHDP01880 384 aa22.33■■□□□ 1.17
CHTOP-203ENST00000368690 STAC3Q96MF2 364 aa22.33■■□□□ 1.17
CHTOP-203ENST00000368690 ANTXR1Q9H6X2 564 aa22.33■■□□□ 1.17
CHTOP-203ENST00000368690 POGKQ9P215 609 aa22.33■■□□□ 1.17
CHTOP-203ENST00000368690 PPP6R1Q9UPN7 881 aa22.33■■□□□ 1.17
CHTOP-203ENST00000368690 MYOM1P52179 1685 aa22.33■■□□□ 1.17
CHTOP-203ENST00000368690 FBXO31Q5XUX0 539 aaPredicted RBP22.32■■□□□ 1.16
CHTOP-203ENST00000368690 NOS1P29475 1434 aa22.31■■□□□ 1.16
CHTOP-203ENST00000368690 CLUAP1Q96AJ1 413 aa22.31■■□□□ 1.16
CHTOP-203ENST00000368690 SCAF11Q99590 1463 aaKnown RBP22.31■■□□□ 1.16
CHTOP-203ENST00000368690 BCAR3O75815 825 aa22.29■■□□□ 1.16
CHTOP-203ENST00000368690 MROH2AA6NES4 1674 aa22.29■■□□□ 1.16
CHTOP-203ENST00000368690 PREX1Q8TCU6 1659 aa22.28■■□□□ 1.16
CHTOP-203ENST00000368690 SPINK5Q9NQ38 1064 aaPredicted RBP22.28■■□□□ 1.16
CHTOP-203ENST00000368690 APAF1O14727 1248 aa22.26■■□□□ 1.15
CHTOP-203ENST00000368690 UPF2Q9HAU5 1272 aaKnown RBP22.26■■□□□ 1.15
CHTOP-203ENST00000368690 SEC24BO95487 1268 aa22.26■■□□□ 1.15
CHTOP-203ENST00000368690 IDI1Q13907 227 aa22.26■■□□□ 1.15
CHTOP-203ENST00000368690 KDM5AP29375 1690 aaKnown RBP22.26■■□□□ 1.15
CHTOP-203ENST00000368690 PMFBP1Q8TBY8 1022 aa22.25■■□□□ 1.15
CHTOP-203ENST00000368690 TBC1D32Q96NH3 1257 aa22.25■■□□□ 1.15
CHTOP-203ENST00000368690 ADGRB3O60242 1522 aa22.25■■□□□ 1.15
CHTOP-203ENST00000368690 CENPJQ9HC77 1338 aaPredicted RBP22.25■■□□□ 1.15
CHTOP-203ENST00000368690 SLC24A1O60721 1099 aa22.25■■□□□ 1.15
CHTOP-203ENST00000368690 RRAGDQ9NQL2 400 aaPredicted RBP22.25■■□□□ 1.15
CHTOP-203ENST00000368690 SLC52A1Q9NWF4 448 aa22.25■■□□□ 1.15
CHTOP-203ENST00000368690 KIAA1210Q9ULL0 1709 aa22.24■■□□□ 1.15
CHTOP-203ENST00000368690 ERVK-7P63135 1459 aa22.23■■□□□ 1.15
CHTOP-203ENST00000368690 NEURL4Q96JN8 1562 aa22.23■■□□□ 1.15
CHTOP-203ENST00000368690 FSD2A1L4K1 749 aa22.23■■□□□ 1.15
CHTOP-203ENST00000368690 PIK3C2BO00750 1634 aa22.22■■□□□ 1.15
CHTOP-203ENST00000368690 CCDC146Q8IYE0 955 aa22.22■■□□□ 1.15
CHTOP-203ENST00000368690 STAG3Q9UJ98 1225 aa22.22■■□□□ 1.15
CHTOP-203ENST00000368690 PLPPR3Q6T4P5 718 aa22.21■■□□□ 1.15
CHTOP-203ENST00000368690 NUTM2DQ5VT03 806 aaPredicted RBP22.21■■□□□ 1.15
CHTOP-203ENST00000368690 SLKQ9H2G2 1235 aaPredicted RBP22.21■■□□□ 1.15
CHTOP-203ENST00000368690 ADGRF5Q8IZF2 1346 aa22.2■■□□□ 1.14
CHTOP-203ENST00000368690 POLR3AO14802 1390 aaPredicted RBP22.18■■□□□ 1.14
CHTOP-203ENST00000368690 TBC1D2Q9BYX2 928 aa22.18■■□□□ 1.14
CHTOP-203ENST00000368690 GOLGA6L3A6NEY3 463 aa22.18■■□□□ 1.14
CHTOP-203ENST00000368690 COG6Q9Y2V7 657 aa22.17■■□□□ 1.14
CHTOP-203ENST00000368690 MYOM2P54296 1465 aa22.17■■□□□ 1.14
CHTOP-203ENST00000368690 IFT172Q9UG01 1749 aa22.17■■□□□ 1.14
CHTOP-203ENST00000368690 SENP3Q9H4L4 574 aaPredicted RBP22.16■■□□□ 1.14
CHTOP-203ENST00000368690 CANXP27824 592 aaKnown RBP22.16■■□□□ 1.14
CHTOP-203ENST00000368690 CLCN1P35523 988 aa22.16■■□□□ 1.14
CHTOP-203ENST00000368690 XRCC6P12956 609 aaKnown RBP eCLIP22.15■■□□□ 1.14
CHTOP-203ENST00000368690 WWC1Q8IX03 1113 aa22.15■■□□□ 1.14
CHTOP-203ENST00000368690 PANK1Q8TE04 598 aa22.15■■□□□ 1.14
CHTOP-203ENST00000368690 MCM4P33991 863 aa22.15■■□□□ 1.14
CHTOP-203ENST00000368690 CFAP70Q5T0N1 1121 aa22.14■■□□□ 1.13
CHTOP-203ENST00000368690 DMRT2Q9Y5R5 561 aa22.14■■□□□ 1.13
CHTOP-203ENST00000368690 RPGRIP1LQ68CZ1 1315 aa22.14■■□□□ 1.13
CHTOP-203ENST00000368690 PPLO60437 1756 aa22.14■■□□□ 1.13
CHTOP-203ENST00000368690 SPATA31D1Q6ZQQ2 1576 aa22.14■■□□□ 1.13
CHTOP-203ENST00000368690 ISY1Q9ULR0 285 aaKnown RBP22.14■■□□□ 1.13
CHTOP-203ENST00000368690 MYO5BQ9ULV0 1848 aa22.13■■□□□ 1.13
CHTOP-203ENST00000368690 CEBPAP49715 358 aaPredicted RBP22.12■■□□□ 1.13
CHTOP-203ENST00000368690 RARSP54136 660 aaKnown RBP22.11■■□□□ 1.13
CHTOP-203ENST00000368690 GLIPR1L2Q4G1C9 344 aa22.11■■□□□ 1.13
CHTOP-203ENST00000368690 RWDD1Q9H446 243 aaPredicted RBP22.11■■□□□ 1.13
CHTOP-203ENST00000368690 TMEM131LA2VDJ0 1609 aa22.11■■□□□ 1.13
CHTOP-203ENST00000368690 CHMP5Q9NZZ3 219 aa22.11■■□□□ 1.13
CHTOP-203ENST00000368690 VGFO15240 615 aaPredicted RBP22.1■■□□□ 1.13
CHTOP-203ENST00000368690 NCBP3Q53F19 620 aaKnown RBP22.1■■□□□ 1.13
CHTOP-203ENST00000368690 PDZRN3Q9UPQ7 1066 aa22.1■■□□□ 1.13
CHTOP-203ENST00000368690 FER1L4A9Z1Z3 1794 aa22.1■■□□□ 1.13
CHTOP-203ENST00000368690 PHF23Q9BUL5 403 aaPredicted RBP22.09■■□□□ 1.13
CHTOP-203ENST00000368690 IQSEC2Q5JU85 1478 aa22.09■■□□□ 1.13
CHTOP-203ENST00000368690 SHPRHQ149N8 1683 aa22.09■■□□□ 1.13
CHTOP-203ENST00000368690 NEXMIFQ5QGS0 1516 aa22.09■■□□□ 1.13
CHTOP-203ENST00000368690 MRE11P49959 708 aa22.09■■□□□ 1.13
CHTOP-203ENST00000368690 PCDHB15Q9Y5E8 787 aa22.09■■□□□ 1.13
CHTOP-203ENST00000368690 WDR63Q8IWG1 891 aa22.08■■□□□ 1.13
CHTOP-203ENST00000368690 PNNQ9H307 717 aaKnown RBP22.08■■□□□ 1.13
CHTOP-203ENST00000368690 TNRQ92752 1358 aa22.07■■□□□ 1.12
CHTOP-203ENST00000368690 NRXN1Q9ULB1 1477 aa22.07■■□□□ 1.12
CHTOP-203ENST00000368690 MYO3AQ8NEV4 1616 aa22.05■■□□□ 1.12
CHTOP-203ENST00000368690 CCDC27Q2M243 656 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms