RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.28□□□□□ -0.76
ECHDC1-202ENST00000368289 LRP6O75581 1613 aa10.28□□□□□ -0.76
ECHDC1-202ENST00000368289 MED14O60244 1454 aa10.27□□□□□ -0.77
ECHDC1-202ENST00000368289 LMOD2Q6P5Q4 547 aa10.26□□□□□ -0.77
ECHDC1-202ENST00000368289 SUPT6HQ7KZ85 1726 aaKnown RBP10.26□□□□□ -0.77
ECHDC1-202ENST00000368289 SAMD9Q5K651 1589 aa10.26□□□□□ -0.77
ECHDC1-202ENST00000368289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.26□□□□□ -0.77
ECHDC1-202ENST00000368289 NPHP4O75161 1426 aaPredicted RBP10.25□□□□□ -0.77
ECHDC1-202ENST00000368289 GRXCR2A6NFK2 248 aa10.25□□□□□ -0.77
ECHDC1-202ENST00000368289 ARSIQ5FYB1 569 aa10.25□□□□□ -0.77
ECHDC1-202ENST00000368289 GPR153Q6NV75 609 aa10.25□□□□□ -0.77
ECHDC1-202ENST00000368289 POLR1AO95602 1720 aaPredicted RBP10.24□□□□□ -0.77
ECHDC1-202ENST00000368289 MLLT3P42568 568 aaPredicted RBP10.24□□□□□ -0.77
ECHDC1-202ENST00000368289 FBXO31Q5XUX0 539 aaPredicted RBP10.24□□□□□ -0.77
ECHDC1-202ENST00000368289 XIRP1Q702N8 1843 aaKnown RBP10.23□□□□□ -0.77
ECHDC1-202ENST00000368289 PRXQ9BXM0 1461 aa10.23□□□□□ -0.77
ECHDC1-202ENST00000368289 MYT1LQ9UL68 1186 aa10.23□□□□□ -0.77
ECHDC1-202ENST00000368289 UTRNP46939 3433 aa10.23□□□□□ -0.77
ECHDC1-202ENST00000368289 KIDINS220Q9ULH0 1771 aa10.23□□□□□ -0.77
ECHDC1-202ENST00000368289 CDK13Q14004 1512 aaKnown RBP10.23□□□□□ -0.77
ECHDC1-202ENST00000368289 CLTCQ00610 1675 aaKnown RBP10.22□□□□□ -0.77
ECHDC1-202ENST00000368289 PHF14O94880 888 aa10.22□□□□□ -0.77
ECHDC1-202ENST00000368289 NUDT7P0C024 238 aa10.22□□□□□ -0.77
ECHDC1-202ENST00000368289 HOXB1P14653 301 aaPredicted RBP10.22□□□□□ -0.77
ECHDC1-202ENST00000368289 ANKLE2Q86XL3 938 aa10.22□□□□□ -0.77
ECHDC1-202ENST00000368289 DDX12PQ92771 950 aa10.22□□□□□ -0.77
ECHDC1-202ENST00000368289 EPAS1Q99814 870 aa10.22□□□□□ -0.77
ECHDC1-202ENST00000368289 CDK12Q9NYV4 1490 aaPredicted RBP10.21□□□□□ -0.78
ECHDC1-202ENST00000368289 PSDA5PKW4 1024 aaPredicted RBP10.2□□□□□ -0.78
ECHDC1-202ENST00000368289 RXRBP28702 533 aa10.2□□□□□ -0.78
ECHDC1-202ENST00000368289 ABCC1P33527 1531 aa10.2□□□□□ -0.78
ECHDC1-202ENST00000368289 RBM33Q96EV2 1170 aaKnown RBP10.2□□□□□ -0.78
ECHDC1-202ENST00000368289 RGS12O14924 1447 aa10.19□□□□□ -0.78
ECHDC1-202ENST00000368289 TPRNQ4KMQ1 711 aa10.19□□□□□ -0.78
ECHDC1-202ENST00000368289 SYNMO15061 1565 aa10.18□□□□□ -0.78
ECHDC1-202ENST00000368289 ZNF772Q68DY9 489 aaPredicted RBP10.18□□□□□ -0.78
ECHDC1-202ENST00000368289 KHSRPQ92945 711 aaKnown RBP eCLIP10.18□□□□□ -0.782e-12■■■□□ 17
ECHDC1-202ENST00000368289 FBXW7Q969H0 707 aa10.18□□□□□ -0.78
ECHDC1-202ENST00000368289 ROBO1Q9Y6N7 1651 aa10.18□□□□□ -0.78
ECHDC1-202ENST00000368289 DEPDC5O75140 1603 aa10.18□□□□□ -0.78
ECHDC1-202ENST00000368289 KIF14Q15058 1648 aa10.18□□□□□ -0.78
ECHDC1-202ENST00000368289 JCADQ9P266 1359 aa10.17□□□□□ -0.78
ECHDC1-202ENST00000368289 TYW1BQ6NUM6 668 aa10.17□□□□□ -0.78
ECHDC1-202ENST00000368289 OSBPP22059 807 aa10.16□□□□□ -0.78
ECHDC1-202ENST00000368289 IQGAP1P46940 1657 aa10.15□□□□□ -0.78
ECHDC1-202ENST00000368289 TNRQ92752 1358 aa10.15□□□□□ -0.78
ECHDC1-202ENST00000368289 FOSBP53539 338 aa10.15□□□□□ -0.78
ECHDC1-202ENST00000368289 RBM26Q5T8P6 1007 aaKnown RBP10.15□□□□□ -0.78
ECHDC1-202ENST00000368289 GGT6Q6P531 493 aa10.15□□□□□ -0.78
ECHDC1-202ENST00000368289 GPIHBP1Q8IV16 184 aa10.15□□□□□ -0.78
ECHDC1-202ENST00000368289 FAM9AQ8IZU1 332 aaPredicted RBP10.15□□□□□ -0.78
ECHDC1-202ENST00000368289 ZNF454Q8N9F8 522 aa10.15□□□□□ -0.78
ECHDC1-202ENST00000368289 PCDHGA10Q9Y5H3 936 aa10.15□□□□□ -0.78
ECHDC1-202ENST00000368289 ARHGAP5Q13017 1502 aa10.15□□□□□ -0.78
ECHDC1-202ENST00000368289 MYO5CQ9NQX4 1742 aa10.15□□□□□ -0.78
ECHDC1-202ENST00000368289 PLXNC1O60486 1568 aa10.14□□□□□ -0.79
ECHDC1-202ENST00000368289 HRCP23327 699 aa10.14□□□□□ -0.79
ECHDC1-202ENST00000368289 PPP4R3BQ5MIZ7 849 aa10.14□□□□□ -0.79
ECHDC1-202ENST00000368289 LHX6Q9UPM6 363 aa10.14□□□□□ -0.79
ECHDC1-202ENST00000368289 ZC3H13Q5T200 1668 aaKnown RBP10.14□□□□□ -0.79
ECHDC1-202ENST00000368289 THEMISQ8N1K5 641 aaPredicted RBP10.13□□□□□ -0.79
ECHDC1-202ENST00000368289 ZDHHC16Q969W1 377 aa10.13□□□□□ -0.79
ECHDC1-202ENST00000368289 MAP3K1Q13233 1512 aa10.12□□□□□ -0.79
ECHDC1-202ENST00000368289 ITSN2Q9NZM3 1697 aa10.12□□□□□ -0.79
ECHDC1-202ENST00000368289 NUTM2FA1L443 756 aa10.12□□□□□ -0.79
ECHDC1-202ENST00000368289 EN1Q05925 392 aaPredicted RBP10.12□□□□□ -0.79
ECHDC1-202ENST00000368289 TMEM94Q12767 1356 aa10.12□□□□□ -0.79
ECHDC1-202ENST00000368289 COL16A1Q07092 1604 aaPredicted RBP10.11□□□□□ -0.79
ECHDC1-202ENST00000368289 CDC42BPBQ9Y5S2 1711 aa10.11□□□□□ -0.79
ECHDC1-202ENST00000368289 SAMD9LQ8IVG5 1584 aa10.11□□□□□ -0.79
ECHDC1-202ENST00000368289 MAP3K7O43318 606 aa10.11□□□□□ -0.79
ECHDC1-202ENST00000368289 ST18O60284 1047 aa10.11□□□□□ -0.79
ECHDC1-202ENST00000368289 FAM163AQ96GL9 167 aaPredicted RBP10.11□□□□□ -0.79
ECHDC1-202ENST00000368289 MIA2Q96PC5 1412 aa10.1□□□□□ -0.79
ECHDC1-202ENST00000368289 LTKP29376 864 aa10.1□□□□□ -0.79
ECHDC1-202ENST00000368289 ZC3H15Q8WU90 426 aaKnown RBP10.1□□□□□ -0.79
ECHDC1-202ENST00000368289 UGGT1Q9NYU2 1555 aa10.09□□□□□ -0.79
ECHDC1-202ENST00000368289 AFF2P51816 1311 aa10.09□□□□□ -0.79
ECHDC1-202ENST00000368289 SPATA31A6Q5VVP1 1343 aa10.09□□□□□ -0.79
ECHDC1-202ENST00000368289 RANGAP1P46060 587 aaPredicted RBP10.09□□□□□ -0.79
ECHDC1-202ENST00000368289 ERBB3P21860 1342 aa10.08□□□□□ -0.8
ECHDC1-202ENST00000368289 NUTM2BA6NNL0 878 aaPredicted RBP10.08□□□□□ -0.8
ECHDC1-202ENST00000368289 NUTM2EB1AL46 878 aaPredicted RBP10.08□□□□□ -0.8
ECHDC1-202ENST00000368289 FCHSD2O94868 740 aa10.08□□□□□ -0.8
ECHDC1-202ENST00000368289 NUTM2DQ5VT03 806 aaPredicted RBP10.08□□□□□ -0.8
ECHDC1-202ENST00000368289 NUTM2AQ8IVF1 878 aaPredicted RBP10.08□□□□□ -0.8
ECHDC1-202ENST00000368289 A2MP01023 1474 aa10.08□□□□□ -0.8
ECHDC1-202ENST00000368289 KDM5DQ9BY66 1539 aa10.07□□□□□ -0.8
ECHDC1-202ENST00000368289 PHLPP1O60346 1717 aa10.07□□□□□ -0.8
ECHDC1-202ENST00000368289 PZPP20742 1482 aa10.07□□□□□ -0.8
ECHDC1-202ENST00000368289 PRKCSHP14314 528 aaPredicted RBP10.07□□□□□ -0.8
ECHDC1-202ENST00000368289 EMP3P54852 163 aa10.07□□□□□ -0.8
ECHDC1-202ENST00000368289 MEX3CQ5U5Q3 659 aaKnown RBP10.07□□□□□ -0.8
ECHDC1-202ENST00000368289 SLAIN2Q9P270 581 aa10.07□□□□□ -0.8
ECHDC1-202ENST00000368289 LRP5O75197 1615 aa10.07□□□□□ -0.8
ECHDC1-202ENST00000368289 ATP7AQ04656 1500 aa10.06□□□□□ -0.8
ECHDC1-202ENST00000368289 FAM135AQ9P2D6 1515 aa10.06□□□□□ -0.8
ECHDC1-202ENST00000368289 NLRP1Q9C000 1473 aa10.05□□□□□ -0.8
ECHDC1-202ENST00000368289 RBM6P78332 1123 aaKnown RBP10.05□□□□□ -0.8
ECHDC1-202ENST00000368289 TRIM26Q12899 539 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms