RNA–Protein interactions for RNA: ENST00000368259.6

CCT3-204, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2 BASIC

Gene CCT3, Length 1,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-204ENST00000368259 KNSTRNQ9Y448 316 aa16.57■□□□□ 0.24
CCT3-204ENST00000368259 ERBB4Q15303 1308 aa16.57■□□□□ 0.24
CCT3-204ENST00000368259 RWDD1Q9H446 243 aaPredicted RBP16.56■□□□□ 0.24
CCT3-204ENST00000368259 CLEC17AQ6ZS10 378 aa16.56■□□□□ 0.24
CCT3-204ENST00000368259 HSCBQ8IWL3 235 aa16.56■□□□□ 0.24
CCT3-204ENST00000368259 SMC5Q8IY18 1101 aa16.56■□□□□ 0.24
CCT3-204ENST00000368259 SMAP1Q8IYB5 467 aaPredicted RBP16.56■□□□□ 0.24
CCT3-204ENST00000368259 ANP32BQ92688 251 aaKnown RBP16.56■□□□□ 0.24
CCT3-204ENST00000368259 RSPH4AQ5TD94 716 aa16.55■□□□□ 0.24
CCT3-204ENST00000368259 KIAA1210Q9ULL0 1709 aa16.54■□□□□ 0.24
CCT3-204ENST00000368259 KIAA1211Q6ZU35 1233 aa16.54■□□□□ 0.24
CCT3-204ENST00000368259 PRDM4Q9UKN5 801 aa16.54■□□□□ 0.24
CCT3-204ENST00000368259 KDM2AQ9Y2K7 1162 aa16.54■□□□□ 0.24
CCT3-204ENST00000368259 TSPOAP1O95153 1857 aa16.54■□□□□ 0.24
CCT3-204ENST00000368259 C22orf23Q9BZE7 217 aa16.54■□□□□ 0.24
CCT3-204ENST00000368259 DUOX2Q9NRD8 1548 aa16.54■□□□□ 0.24
CCT3-204ENST00000368259 PLB1Q6P1J6 1458 aa16.53■□□□□ 0.24
CCT3-204ENST00000368259 MCM5P33992 734 aa16.53■□□□□ 0.24
CCT3-204ENST00000368259 KDM5AP29375 1690 aaKnown RBP16.53■□□□□ 0.24
CCT3-204ENST00000368259 REREQ9P2R6 1566 aa16.53■□□□□ 0.24
CCT3-204ENST00000368259 MADDQ8WXG6 1647 aa16.52■□□□□ 0.23
CCT3-204ENST00000368259 RBM25P49756 843 aaKnown RBP16.52■□□□□ 0.23
CCT3-204ENST00000368259 PLA2R1Q13018 1463 aa16.51■□□□□ 0.23
CCT3-204ENST00000368259 ZNF500O60304 480 aaPredicted RBP16.51■□□□□ 0.23
CCT3-204ENST00000368259 BCAR3O75815 825 aa16.51■□□□□ 0.23
CCT3-204ENST00000368259 TTC37Q6PGP7 1564 aa16.51■□□□□ 0.23
CCT3-204ENST00000368259 NEURL4Q96JN8 1562 aa16.51■□□□□ 0.23
CCT3-204ENST00000368259 POLR3AO14802 1390 aaPredicted RBP16.51■□□□□ 0.23
CCT3-204ENST00000368259 TSPY4P0CV99 314 aa16.5■□□□□ 0.23
CCT3-204ENST00000368259 TSPY10P0CW01 314 aa16.5■□□□□ 0.23
CCT3-204ENST00000368259 CSPP1Q1MSJ5 1256 aa16.5■□□□□ 0.23
CCT3-204ENST00000368259 CT47B1P0C2W7 299 aaPredicted RBP16.49■□□□□ 0.23
CCT3-204ENST00000368259 MSNP26038 577 aaKnown RBP16.49■□□□□ 0.23
CCT3-204ENST00000368259 RAB3GAP1Q15042 981 aa16.49■□□□□ 0.23
CCT3-204ENST00000368259 GZF1Q9H116 711 aaPredicted RBP16.49■□□□□ 0.23
CCT3-204ENST00000368259 PDZRN3Q9UPQ7 1066 aa16.49■□□□□ 0.23
CCT3-204ENST00000368259 SCAF11Q99590 1463 aaKnown RBP16.49■□□□□ 0.23
CCT3-204ENST00000368259 YEATS2Q9ULM3 1422 aa16.48■□□□□ 0.23
CCT3-204ENST00000368259 CANXP27824 592 aaKnown RBP16.48■□□□□ 0.23
CCT3-204ENST00000368259 UTP14CQ5TAP6 766 aaKnown RBP16.48■□□□□ 0.23
CCT3-204ENST00000368259 IQSEC2Q5JU85 1478 aa16.48■□□□□ 0.23
CCT3-204ENST00000368259 SPHKAPQ2M3C7 1700 aa16.48■□□□□ 0.23
CCT3-204ENST00000368259 GOLGA6L22H0YM25 854 aa16.47■□□□□ 0.23
CCT3-204ENST00000368259 DYNC1I1O14576 645 aa16.47■□□□□ 0.23
CCT3-204ENST00000368259 NBPF1Q3BBV0 1214 aa16.47■□□□□ 0.23
CCT3-204ENST00000368259 KIF16BQ96L93 1317 aa16.47■□□□□ 0.23
CCT3-204ENST00000368259 ADGRL1O94910 1474 aa16.46■□□□□ 0.23
CCT3-204ENST00000368259 NCLP19338 710 aaKnown RBP16.46■□□□□ 0.23
CCT3-204ENST00000368259 HDAC1Q13547 482 aaPredicted RBP16.46■□□□□ 0.23
CCT3-204ENST00000368259 WDR63Q8IWG1 891 aa16.46■□□□□ 0.23
CCT3-204ENST00000368259 PHF23Q9BUL5 403 aaPredicted RBP16.46■□□□□ 0.23
CCT3-204ENST00000368259 NASPP49321 788 aaPredicted RBP16.45■□□□□ 0.22
CCT3-204ENST00000368259 CCDC27Q2M243 656 aa16.45■□□□□ 0.22
CCT3-204ENST00000368259 KLHL40Q2TBA0 621 aa16.45■□□□□ 0.22
CCT3-204ENST00000368259 COG6Q9Y2V7 657 aa16.45■□□□□ 0.22
CCT3-204ENST00000368259 CEP152O94986 1710 aa16.45■□□□□ 0.22
CCT3-204ENST00000368259 PREX2Q70Z35 1606 aa16.45■□□□□ 0.22
CCT3-204ENST00000368259 APAF1O14727 1248 aa16.45■□□□□ 0.22
CCT3-204ENST00000368259 ZNF445P59923 1031 aa16.45■□□□□ 0.22
CCT3-204ENST00000368259 NOL7Q9UMY1 257 aaKnown RBP16.45■□□□□ 0.22
CCT3-204ENST00000368259 RARSP54136 660 aaKnown RBP16.44■□□□□ 0.22
CCT3-204ENST00000368259 RIPK4P57078 832 aa16.44■□□□□ 0.22
CCT3-204ENST00000368259 TNPO1Q92973 898 aaKnown RBP16.44■□□□□ 0.22
CCT3-204ENST00000368259 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
CCT3-204ENST00000368259 SHPRHQ149N8 1683 aa16.44■□□□□ 0.22
CCT3-204ENST00000368259 WWC1Q8IX03 1113 aa16.42■□□□□ 0.22
CCT3-204ENST00000368259 PDLIM2Q96JY6 352 aa16.42■□□□□ 0.22
CCT3-204ENST00000368259 PCDHB15Q9Y5E8 787 aa16.42■□□□□ 0.22
CCT3-204ENST00000368259 GAS2L3Q86XJ1 694 aa16.42■□□□□ 0.22
CCT3-204ENST00000368259 PANK1Q8TE04 598 aa16.42■□□□□ 0.22
CCT3-204ENST00000368259 USP32Q8NFA0 1604 aa16.42■□□□□ 0.22
CCT3-204ENST00000368259 HECW2Q9P2P5 1572 aa16.41■□□□□ 0.22
CCT3-204ENST00000368259 GLI2P10070 1586 aa16.41■□□□□ 0.22
CCT3-204ENST00000368259 MVPQ14764 893 aaKnown RBP16.4■□□□□ 0.22
CCT3-204ENST00000368259 CFAP44Q96MT7 982 aa16.4■□□□□ 0.22
CCT3-204ENST00000368259 SAMD9LQ8IVG5 1584 aa16.4■□□□□ 0.22
CCT3-204ENST00000368259 ARID3CA6NKF2 412 aa16.39■□□□□ 0.21
CCT3-204ENST00000368259 MYO3AQ8NEV4 1616 aa16.39■□□□□ 0.21
CCT3-204ENST00000368259 PPRC1Q5VV67 1664 aaKnown RBP16.38■□□□□ 0.21
CCT3-204ENST00000368259 CFAP74Q9C0B2 1584 aa16.38■□□□□ 0.21
CCT3-204ENST00000368259 ARXQ96QS3 562 aa16.38■□□□□ 0.21
CCT3-204ENST00000368259 ATP10BO94823 1461 aa16.37■□□□□ 0.21
CCT3-204ENST00000368259 ADGRB2O60241 1585 aa16.37■□□□□ 0.21
CCT3-204ENST00000368259 SBNO2Q9Y2G9 1366 aa16.36■□□□□ 0.21
CCT3-204ENST00000368259 ZNF777Q9ULD5 760 aaPredicted RBP16.36■□□□□ 0.21
CCT3-204ENST00000368259 TRPM2O94759 1503 aa16.36■□□□□ 0.21
CCT3-204ENST00000368259 MFAP1P55081 439 aaKnown RBP16.35■□□□□ 0.21
CCT3-204ENST00000368259 SASS6Q6UVJ0 657 aa16.35■□□□□ 0.21
CCT3-204ENST00000368259 CDC42BPBQ9Y5S2 1711 aa16.35■□□□□ 0.21
CCT3-204ENST00000368259 HSP90AB1P08238 724 aaKnown RBP16.35■□□□□ 0.21
CCT3-204ENST00000368259 RUNDC1Q96C34 613 aa16.35■□□□□ 0.21
CCT3-204ENST00000368259 CLTCL1P53675 1640 aa16.35■□□□□ 0.21
CCT3-204ENST00000368259 ZCCHC11Q5TAX3 1644 aaKnown RBP16.35■□□□□ 0.21
CCT3-204ENST00000368259 DDX19BQ9UMR2 479 aa16.34■□□□□ 0.21
CCT3-204ENST00000368259 ZKSCAN5Q9Y2L8 839 aa16.34■□□□□ 0.21
CCT3-204ENST00000368259 PLEKHD1A6NEE1 506 aa16.33■□□□□ 0.21
CCT3-204ENST00000368259 RBM10P98175 930 aaKnown RBP16.33■□□□□ 0.21
CCT3-204ENST00000368259 ZKSCAN2Q63HK3 967 aa16.33■□□□□ 0.21
CCT3-204ENST00000368259 CCDC146Q8IYE0 955 aa16.33■□□□□ 0.21
CCT3-204ENST00000368259 K7ELQ4 463 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms