RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 BLMP54132 1417 aaPredicted RBP18.76■□□□□ 0.59
USF1-202ENST00000368020 PPP4R2Q9NY27 417 aa18.76■□□□□ 0.59
USF1-202ENST00000368020 CENPJQ9HC77 1338 aaPredicted RBP18.76■□□□□ 0.59
USF1-202ENST00000368020 AMER1Q5JTC6 1135 aaPredicted RBP18.73■□□□□ 0.59
USF1-202ENST00000368020 PUS7Q96PZ0 661 aaKnown RBP18.73■□□□□ 0.59
USF1-202ENST00000368020 RNF123Q5XPI4 1314 aa18.73■□□□□ 0.59
USF1-202ENST00000368020 LMTK3Q96Q04 1460 aa18.73■□□□□ 0.59
USF1-202ENST00000368020 ALKQ9UM73 1620 aa18.73■□□□□ 0.59
USF1-202ENST00000368020 NRXN3Q9Y4C0 1643 aa18.71■□□□□ 0.59
USF1-202ENST00000368020 ARHGEF28Q8N1W1 1705 aaKnown RBP18.71■□□□□ 0.59
USF1-202ENST00000368020 MED14O60244 1454 aa18.7■□□□□ 0.58
USF1-202ENST00000368020 USP32Q8NFA0 1604 aa18.7■□□□□ 0.58
USF1-202ENST00000368020 ADAMTS13Q76LX8 1427 aa18.69■□□□□ 0.58
USF1-202ENST00000368020 TSHZ2Q9NRE2 1034 aa18.69■□□□□ 0.58
USF1-202ENST00000368020 TBX22Q9Y458 520 aa18.69■□□□□ 0.58
USF1-202ENST00000368020 SETD1AO15047 1707 aaKnown RBP18.68■□□□□ 0.58
USF1-202ENST00000368020 DIP2AQ14689 1571 aa18.67■□□□□ 0.58
USF1-202ENST00000368020 PPP2R1AP30153 589 aa18.67■□□□□ 0.58
USF1-202ENST00000368020 WDR43Q15061 677 aaKnown RBP eCLIP18.65■□□□□ 0.58
USF1-202ENST00000368020 TMEM132EQ6IEE7 984 aa18.65■□□□□ 0.58
USF1-202ENST00000368020 NPHP4O75161 1426 aaPredicted RBP18.64■□□□□ 0.57
USF1-202ENST00000368020 PIK3R4Q99570 1358 aa18.64■□□□□ 0.57
USF1-202ENST00000368020 NINLQ9Y2I6 1382 aa18.63■□□□□ 0.57
USF1-202ENST00000368020 IRX6P78412 446 aaPredicted RBP18.63■□□□□ 0.57
USF1-202ENST00000368020 TRAK1Q9UPV9 953 aa18.63■□□□□ 0.57
USF1-202ENST00000368020 YTHDC2Q9H6S0 1430 aaKnown RBP18.62■□□□□ 0.57
USF1-202ENST00000368020 METP08581 1390 aa18.62■□□□□ 0.57
USF1-202ENST00000368020 ABCC11Q96J66 1382 aa18.62■□□□□ 0.57
USF1-202ENST00000368020 EVC2Q86UK5 1308 aa18.62■□□□□ 0.57
USF1-202ENST00000368020 HSPA2P54652 639 aa18.62■□□□□ 0.57
USF1-202ENST00000368020 NCKAP5LQ9HCH0 1330 aa18.61■□□□□ 0.57
USF1-202ENST00000368020 MYT1Q01538 1121 aa18.61■□□□□ 0.57
USF1-202ENST00000368020 SLC26A8Q96RN1 970 aa18.61■□□□□ 0.57
USF1-202ENST00000368020 NGEFQ8N5V2 710 aa18.6■□□□□ 0.57
USF1-202ENST00000368020 TECPR2O15040 1411 aa18.6■□□□□ 0.57
USF1-202ENST00000368020 SIRT1Q96EB6 747 aa18.6■□□□□ 0.57
USF1-202ENST00000368020 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
USF1-202ENST00000368020 DLC1Q96QB1 1528 aa18.58■□□□□ 0.57
USF1-202ENST00000368020 NSD2O96028 1365 aa18.58■□□□□ 0.56
USF1-202ENST00000368020 STRCQ7RTU9 1775 aa18.57■□□□□ 0.56
USF1-202ENST00000368020 TULP4Q9NRJ4 1543 aa18.56■□□□□ 0.56
USF1-202ENST00000368020 RCAN3Q9UKA8 241 aa18.56■□□□□ 0.56
USF1-202ENST00000368020 ADAMTS8Q9UP79 889 aa18.56■□□□□ 0.56
USF1-202ENST00000368020 KNDC1Q76NI1 1749 aa18.56■□□□□ 0.56
USF1-202ENST00000368020 FAM135BQ49AJ0 1406 aa18.55■□□□□ 0.56
USF1-202ENST00000368020 NSD3Q9BZ95 1437 aa18.55■□□□□ 0.56
USF1-202ENST00000368020 POLR3AO14802 1390 aaPredicted RBP18.55■□□□□ 0.56
USF1-202ENST00000368020 ANKRD36BQ8N2N9 1353 aa18.55■□□□□ 0.56
USF1-202ENST00000368020 CARD14Q9BXL6 1004 aa18.54■□□□□ 0.56
USF1-202ENST00000368020 STK26Q9P289 416 aa18.54■□□□□ 0.56
USF1-202ENST00000368020 CGNL1Q0VF96 1302 aa18.54■□□□□ 0.56
USF1-202ENST00000368020 PTPRUQ92729 1446 aa18.53■□□□□ 0.56
USF1-202ENST00000368020 CHD2O14647 1828 aaKnown RBP18.53■□□□□ 0.56
USF1-202ENST00000368020 CPS1P31327 1500 aa18.53■□□□□ 0.56
USF1-202ENST00000368020 RRP1P56182 461 aaKnown RBP18.52■□□□□ 0.56
USF1-202ENST00000368020 AMOTL2Q9Y2J4 779 aa18.52■□□□□ 0.56
USF1-202ENST00000368020 ATAD2Q6PL18 1390 aa18.52■□□□□ 0.56
USF1-202ENST00000368020 DMRT2Q9Y5R5 561 aa18.52■□□□□ 0.55
USF1-202ENST00000368020 PTCH1Q13635 1447 aa18.51■□□□□ 0.55
USF1-202ENST00000368020 XRN1Q8IZH2 1706 aaKnown RBP18.51■□□□□ 0.55
USF1-202ENST00000368020 PRAM1Q96QH2 718 aa18.5■□□□□ 0.55
USF1-202ENST00000368020 KCNA6P17658 529 aa18.49■□□□□ 0.55
USF1-202ENST00000368020 POGKQ9P215 609 aa18.49■□□□□ 0.55
USF1-202ENST00000368020 MORC1Q86VD1 984 aa18.49■□□□□ 0.55
USF1-202ENST00000368020 ROBO2Q9HCK4 1378 aa18.48■□□□□ 0.55
USF1-202ENST00000368020 ANKRD26Q9UPS8 1709 aa18.48■□□□□ 0.55
USF1-202ENST00000368020 CCDC136Q96JN2 1154 aa18.47■□□□□ 0.55
USF1-202ENST00000368020 SLC12A5Q9H2X9 1139 aa18.47■□□□□ 0.55
USF1-202ENST00000368020 SALL2Q9Y467 1007 aaPredicted RBP18.47■□□□□ 0.55
USF1-202ENST00000368020 NWD1Q149M9 1564 aa18.46■□□□□ 0.55
USF1-202ENST00000368020 ZNF521Q96K83 1311 aa18.46■□□□□ 0.55
USF1-202ENST00000368020 B4GALNT3Q6L9W6 998 aa18.46■□□□□ 0.55
USF1-202ENST00000368020 GOLGA2Q08379 1002 aa18.46■□□□□ 0.55
USF1-202ENST00000368020 WAPLQ7Z5K2 1190 aa18.46■□□□□ 0.55
USF1-202ENST00000368020 SHPRHQ149N8 1683 aa18.45■□□□□ 0.54
USF1-202ENST00000368020 CFAP53Q96M91 514 aa18.44■□□□□ 0.54
USF1-202ENST00000368020 PLEKHH1Q9ULM0 1364 aa18.44■□□□□ 0.54
USF1-202ENST00000368020 CDCA7LQ96GN5 454 aa18.43■□□□□ 0.54
USF1-202ENST00000368020 TERF2IPQ9NYB0 399 aa18.43■□□□□ 0.54
USF1-202ENST00000368020 RBM19Q9Y4C8 960 aaKnown RBP18.43■□□□□ 0.54
USF1-202ENST00000368020 NKTRP30414 1462 aaKnown RBP18.43■□□□□ 0.54
USF1-202ENST00000368020 SENP3-EIF4A1A0A087X0R7 540 aa18.41■□□□□ 0.54
USF1-202ENST00000368020 SRPK2P78362 688 aaKnown RBP18.41■□□□□ 0.54
USF1-202ENST00000368020 SAFB2Q14151 953 aaKnown RBP eCLIP18.41■□□□□ 0.54
USF1-202ENST00000368020 NCBP3Q53F19 620 aaKnown RBP18.4■□□□□ 0.54
USF1-202ENST00000368020 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.4■□□□□ 0.54
USF1-202ENST00000368020 MINK1Q8N4C8 1332 aaPredicted RBP18.39■□□□□ 0.53
USF1-202ENST00000368020 A0A1W2PP64 1363 aa18.39■□□□□ 0.53
USF1-202ENST00000368020 ADGRB2O60241 1585 aa18.39■□□□□ 0.53
USF1-202ENST00000368020 KIF20BQ96Q89 1820 aa18.38■□□□□ 0.53
USF1-202ENST00000368020 DUSP27Q5VZP5 1158 aa18.38■□□□□ 0.53
USF1-202ENST00000368020 CABP2Q9NPB3 220 aa18.38■□□□□ 0.53
USF1-202ENST00000368020 NCOA3Q9Y6Q9 1424 aa18.38■□□□□ 0.53
USF1-202ENST00000368020 E9PSI1 815 aa18.37■□□□□ 0.53
USF1-202ENST00000368020 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.37■□□□□ 0.53
USF1-202ENST00000368020 ATP7BP35670 1465 aa18.37■□□□□ 0.53
USF1-202ENST00000368020 SLFN5Q08AF3 891 aa18.37■□□□□ 0.53
USF1-202ENST00000368020 WASLO00401 505 aaPredicted RBP18.36■□□□□ 0.53
USF1-202ENST00000368020 HDGFL2Q7Z4V5 671 aaPredicted RBP18.36■□□□□ 0.53
USF1-202ENST00000368020 TRMT2AQ8IZ69 625 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms