RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 NRXN1Q9ULB1 1477 aa21.42■■□□□ 1.02
SF3B5-201ENST00000367569 ORAI2Q96SN7 254 aa21.4■■□□□ 1.02
SF3B5-201ENST00000367569 KDM2AQ9Y2K7 1162 aa21.4■■□□□ 1.02
SF3B5-201ENST00000367569 PNPLA6Q8IY17 1366 aa21.38■■□□□ 1.01
SF3B5-201ENST00000367569 TMEM132EQ6IEE7 984 aa21.38■■□□□ 1.01
SF3B5-201ENST00000367569 DCAF11Q8TEB1 546 aa21.36■■□□□ 1.01
SF3B5-201ENST00000367569 STK26Q9P289 416 aa21.36■■□□□ 1.01
SF3B5-201ENST00000367569 CFAP70Q5T0N1 1121 aa21.35■■□□□ 1.01
SF3B5-201ENST00000367569 SIN3AQ96ST3 1273 aa21.35■■□□□ 1.01
SF3B5-201ENST00000367569 AFF2P51816 1311 aa21.34■■□□□ 1.01
SF3B5-201ENST00000367569 SOS2Q07890 1332 aaPredicted RBP21.33■■□□□ 1.01
SF3B5-201ENST00000367569 YTHDC2Q9H6S0 1430 aaKnown RBP21.32■■□□□ 1
SF3B5-201ENST00000367569 RXRBP28702 533 aa21.32■■□□□ 1
SF3B5-201ENST00000367569 WAPLQ7Z5K2 1190 aa21.32■■□□□ 1
SF3B5-201ENST00000367569 C8orf37Q96NL8 207 aa21.32■■□□□ 1
SF3B5-201ENST00000367569 ADGRB1O14514 1584 aa21.31■■□□□ 1
SF3B5-201ENST00000367569 NEUROD1Q13562 356 aa21.31■■□□□ 1
SF3B5-201ENST00000367569 LRPPRCP42704 1394 aaKnown RBP21.31■■□□□ 1
SF3B5-201ENST00000367569 PLEKHH1Q9ULM0 1364 aa21.31■■□□□ 1
SF3B5-201ENST00000367569 TECPR2O15040 1411 aa21.3■■□□□ 1
SF3B5-201ENST00000367569 PCGF6Q9BYE7 350 aa21.3■■□□□ 1
SF3B5-201ENST00000367569 CDC42BPGQ6DT37 1551 aa21.3■■□□□ 1
SF3B5-201ENST00000367569 ABCC11Q96J66 1382 aa21.29■■□□□ 1
SF3B5-201ENST00000367569 ADAMTS2O95450 1211 aa21.28■■□□□ 1
SF3B5-201ENST00000367569 ESCO1Q5FWF5 840 aa21.28■■□□□ 1
SF3B5-201ENST00000367569 ARHGEF28Q8N1W1 1705 aaKnown RBP21.27■■□□□ 1
SF3B5-201ENST00000367569 C14orf93Q9H972 538 aaKnown RBP21.27■■□□□ 1
SF3B5-201ENST00000367569 NUTM2FA1L443 756 aa21.25■□□□□ 0.99
SF3B5-201ENST00000367569 UPF1Q92900 1129 aaKnown RBP eCLIP21.25■□□□□ 0.995e-11■■■■■ 59
SF3B5-201ENST00000367569 NGLY1Q96IV0 654 aa21.25■□□□□ 0.99
SF3B5-201ENST00000367569 QTRT2Q9H974 415 aaKnown RBP21.25■□□□□ 0.99
SF3B5-201ENST00000367569 KIAA1210Q9ULL0 1709 aa21.25■□□□□ 0.99
SF3B5-201ENST00000367569 CDK12Q9NYV4 1490 aaPredicted RBP21.25■□□□□ 0.99
SF3B5-201ENST00000367569 FOXO3O43524 673 aa21.23■□□□□ 0.99
SF3B5-201ENST00000367569 SAFB2Q14151 953 aaKnown RBP eCLIP21.23■□□□□ 0.99
SF3B5-201ENST00000367569 FMN2Q9NZ56 1722 aa21.23■□□□□ 0.99
SF3B5-201ENST00000367569 NPHP3Q7Z494 1330 aa21.23■□□□□ 0.99
SF3B5-201ENST00000367569 XPCQ01831 940 aaPredicted RBP21.22■□□□□ 0.99
SF3B5-201ENST00000367569 TRPM1Q7Z4N2 1603 aa21.22■□□□□ 0.99
SF3B5-201ENST00000367569 PXDNQ92626 1479 aa21.21■□□□□ 0.99
SF3B5-201ENST00000367569 RGPD8O14715 1765 aaPredicted RBP21.21■□□□□ 0.99
SF3B5-201ENST00000367569 RBM6P78332 1123 aaKnown RBP21.21■□□□□ 0.99
SF3B5-201ENST00000367569 COL22A1Q8NFW1 1626 aaPredicted RBP21.21■□□□□ 0.99
SF3B5-201ENST00000367569 DLC1Q96QB1 1528 aa21.2■□□□□ 0.98
SF3B5-201ENST00000367569 L3MBTL2Q969R5 705 aa21.2■□□□□ 0.98
SF3B5-201ENST00000367569 SIRT1Q96EB6 747 aa21.19■□□□□ 0.98
SF3B5-201ENST00000367569 TRAK1Q9UPV9 953 aa21.19■□□□□ 0.98
SF3B5-201ENST00000367569 RGS12O14924 1447 aa21.19■□□□□ 0.98
SF3B5-201ENST00000367569 PRAM1Q96QH2 718 aa21.17■□□□□ 0.98
SF3B5-201ENST00000367569 USP21Q9UK80 565 aa21.17■□□□□ 0.98
SF3B5-201ENST00000367569 FNBP4Q8N3X1 1017 aaPredicted RBP21.16■□□□□ 0.98
SF3B5-201ENST00000367569 ADGRB2O60241 1585 aa21.14■□□□□ 0.97
SF3B5-201ENST00000367569 NBPF1Q3BBV0 1214 aa21.13■□□□□ 0.97
SF3B5-201ENST00000367569 USP32Q8NFA0 1604 aa21.13■□□□□ 0.97
SF3B5-201ENST00000367569 TONSLQ96HA7 1378 aa21.12■□□□□ 0.97
SF3B5-201ENST00000367569 QRICH2Q9H0J4 1663 aa21.12■□□□□ 0.97
SF3B5-201ENST00000367569 POGKQ9P215 609 aa21.12■□□□□ 0.97
SF3B5-201ENST00000367569 TRPC5Q9UL62 973 aaPredicted RBP21.12■□□□□ 0.97
SF3B5-201ENST00000367569 KIF1AQ12756 1690 aa21.12■□□□□ 0.97
SF3B5-201ENST00000367569 MINK1Q8N4C8 1332 aaPredicted RBP21.11■□□□□ 0.97
SF3B5-201ENST00000367569 HIRIP3Q9BW71 556 aaPredicted RBP21.11■□□□□ 0.97
SF3B5-201ENST00000367569 MARF1Q9Y4F3 1742 aaKnown RBP21.11■□□□□ 0.97
SF3B5-201ENST00000367569 SPATA31A3Q5VYP0 1347 aa21.1■□□□□ 0.97
SF3B5-201ENST00000367569 KRT28Q7Z3Y7 464 aa21.1■□□□□ 0.97
SF3B5-201ENST00000367569 ATRNO75882 1429 aa21.1■□□□□ 0.97
SF3B5-201ENST00000367569 STAC3Q96MF2 364 aa21.09■□□□□ 0.97
SF3B5-201ENST00000367569 PHF8Q9UPP1 1060 aa21.09■□□□□ 0.97
SF3B5-201ENST00000367569 BCL9LQ86UU0 1499 aa21.08■□□□□ 0.97
SF3B5-201ENST00000367569 NBPF8Q3BBV2 869 aa21.06■□□□□ 0.96
SF3B5-201ENST00000367569 ROCK2O75116 1388 aaKnown RBP21.03■□□□□ 0.96
SF3B5-201ENST00000367569 PSME1Q06323 249 aa21.03■□□□□ 0.96
SF3B5-201ENST00000367569 PMFBP1Q8TBY8 1022 aa21.02■□□□□ 0.96
SF3B5-201ENST00000367569 TULP4Q9NRJ4 1543 aa21.02■□□□□ 0.96
SF3B5-201ENST00000367569 TNS3Q68CZ2 1445 aa21.02■□□□□ 0.96
SF3B5-201ENST00000367569 ITSN1Q15811 1721 aa21.01■□□□□ 0.95
SF3B5-201ENST00000367569 CABLES1Q8TDN4 633 aa21.01■□□□□ 0.95
SF3B5-201ENST00000367569 GJD4Q96KN9 370 aaPredicted RBP21.01■□□□□ 0.95
SF3B5-201ENST00000367569 RALGAPBQ86X10 1494 aa21.01■□□□□ 0.95
SF3B5-201ENST00000367569 ATAD2Q6PL18 1390 aa21■□□□□ 0.95
SF3B5-201ENST00000367569 SLIT2O94813 1529 aa21■□□□□ 0.95
SF3B5-201ENST00000367569 TOPAZ1Q8N9V7 1692 aa21■□□□□ 0.95
SF3B5-201ENST00000367569 PLEKHG5O94827 1062 aa21■□□□□ 0.95
SF3B5-201ENST00000367569 ANKARQ7Z5J8 1434 aa21■□□□□ 0.95
SF3B5-201ENST00000367569 SBNO1A3KN83 1393 aa20.99■□□□□ 0.95
SF3B5-201ENST00000367569 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.99■□□□□ 0.95
SF3B5-201ENST00000367569 UNC5CLQ8IV45 518 aa20.99■□□□□ 0.95
SF3B5-201ENST00000367569 LMOD2Q6P5Q4 547 aa20.98■□□□□ 0.95
SF3B5-201ENST00000367569 PRR36Q9H6K5 1346 aa20.98■□□□□ 0.95
SF3B5-201ENST00000367569 ATP7BP35670 1465 aa20.97■□□□□ 0.95
SF3B5-201ENST00000367569 HAP1P54257 671 aaPredicted RBP20.97■□□□□ 0.95
SF3B5-201ENST00000367569 GLI3P10071 1580 aa20.95■□□□□ 0.94
SF3B5-201ENST00000367569 WASLO00401 505 aaPredicted RBP20.95■□□□□ 0.94
SF3B5-201ENST00000367569 CCER1Q8TC90 406 aaPredicted RBP20.95■□□□□ 0.94
SF3B5-201ENST00000367569 CENPJQ9HC77 1338 aaPredicted RBP20.95■□□□□ 0.94
SF3B5-201ENST00000367569 ABCA3Q99758 1704 aa20.95■□□□□ 0.94
SF3B5-201ENST00000367569 EP400Q96L91 3159 aa20.94■□□□□ 0.94
SF3B5-201ENST00000367569 ARHGEF10O15013 1369 aa20.94■□□□□ 0.94
SF3B5-201ENST00000367569 TRPM3Q9HCF6 1732 aaPredicted RBP20.92■□□□□ 0.94
SF3B5-201ENST00000367569 GPRASP1Q5JY77 1395 aa20.92■□□□□ 0.94
SF3B5-201ENST00000367569 EIF3AQ14152 1382 aaKnown RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms