RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 BCL9LQ86UU0 1499 aa12.26□□□□□ -0.45
MRPL55-211ENST00000366738 NEXMIFQ5QGS0 1516 aa12.26□□□□□ -0.45
MRPL55-211ENST00000366738 ROBO2Q9HCK4 1378 aa12.25□□□□□ -0.45
MRPL55-211ENST00000366738 MARF1Q9Y4F3 1742 aaKnown RBP12.25□□□□□ -0.45
MRPL55-211ENST00000366738 HFM1A2PYH4 1435 aa12.24□□□□□ -0.45
MRPL55-211ENST00000366738 PCGF6Q9BYE7 350 aa12.24□□□□□ -0.45
MRPL55-211ENST00000366738 CCDC125Q86Z20 511 aa12.23□□□□□ -0.45
MRPL55-211ENST00000366738 GLI3P10071 1580 aa12.22□□□□□ -0.45
MRPL55-211ENST00000366738 BLMP54132 1417 aaPredicted RBP12.22□□□□□ -0.45
MRPL55-211ENST00000366738 DEFB132Q7Z7B7 95 aa12.22□□□□□ -0.45
MRPL55-211ENST00000366738 LRP5O75197 1615 aa12.22□□□□□ -0.45
MRPL55-211ENST00000366738 PXDNQ92626 1479 aa12.21□□□□□ -0.45
MRPL55-211ENST00000366738 BRWD3Q6RI45 1802 aa12.21□□□□□ -0.45
MRPL55-211ENST00000366738 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.21□□□□□ -0.45
MRPL55-211ENST00000366738 XPCQ01831 940 aaPredicted RBP12.21□□□□□ -0.45
MRPL55-211ENST00000366738 GJD4Q96KN9 370 aaPredicted RBP12.21□□□□□ -0.45
MRPL55-211ENST00000366738 RALGAPBQ86X10 1494 aa12.21□□□□□ -0.46
MRPL55-211ENST00000366738 KIF1BO60333 1816 aa12.18□□□□□ -0.46
MRPL55-211ENST00000366738 ESCO1Q5FWF5 840 aa12.18□□□□□ -0.46
MRPL55-211ENST00000366738 CDC42BPGQ6DT37 1551 aa12.18□□□□□ -0.46
MRPL55-211ENST00000366738 SLIT2O94813 1529 aa12.17□□□□□ -0.46
MRPL55-211ENST00000366738 NPHP3Q7Z494 1330 aa12.17□□□□□ -0.46
MRPL55-211ENST00000366738 PRAG1Q86YV5 1406 aa12.17□□□□□ -0.46
MRPL55-211ENST00000366738 RAB3GAP2Q9H2M9 1393 aa12.17□□□□□ -0.46
MRPL55-211ENST00000366738 PSDA5PKW4 1024 aaPredicted RBP12.16□□□□□ -0.46
MRPL55-211ENST00000366738 FOXO3O43524 673 aa12.16□□□□□ -0.46
MRPL55-211ENST00000366738 UNC5CLQ8IV45 518 aa12.16□□□□□ -0.46
MRPL55-211ENST00000366738 USP32Q8NFA0 1604 aa12.15□□□□□ -0.46
MRPL55-211ENST00000366738 NUTM2FA1L443 756 aa12.14□□□□□ -0.47
MRPL55-211ENST00000366738 SF3B2Q13435 895 aaKnown RBP12.14□□□□□ -0.47
MRPL55-211ENST00000366738 SEPT12Q8IYM1 358 aa12.14□□□□□ -0.47
MRPL55-211ENST00000366738 SLC4A1APQ9BWU0 796 aaKnown RBP12.14□□□□□ -0.47
MRPL55-211ENST00000366738 PPLO60437 1756 aa12.14□□□□□ -0.47
MRPL55-211ENST00000366738 PLCH1Q4KWH8 1693 aa12.13□□□□□ -0.47
MRPL55-211ENST00000366738 PLEKHG5O94827 1062 aa12.11□□□□□ -0.47
MRPL55-211ENST00000366738 HRCP23327 699 aa12.11□□□□□ -0.47
MRPL55-211ENST00000366738 LRPPRCP42704 1394 aaKnown RBP12.1□□□□□ -0.47
MRPL55-211ENST00000366738 VGFO15240 615 aaPredicted RBP12.1□□□□□ -0.47
MRPL55-211ENST00000366738 SPATA31A3Q5VYP0 1347 aa12.1□□□□□ -0.47
MRPL55-211ENST00000366738 RPGRIP1LQ68CZ1 1315 aa12.1□□□□□ -0.47
MRPL55-211ENST00000366738 ADGRF5Q8IZF2 1346 aa12.1□□□□□ -0.47
MRPL55-211ENST00000366738 ABCA3Q99758 1704 aa12.09□□□□□ -0.47
MRPL55-211ENST00000366738 FMN2Q9NZ56 1722 aa12.09□□□□□ -0.47
MRPL55-211ENST00000366738 VPS72Q15906 364 aa12.09□□□□□ -0.47
MRPL55-211ENST00000366738 KRT27Q7Z3Y8 459 aa12.09□□□□□ -0.47
MRPL55-211ENST00000366738 CABLES1Q8TDN4 633 aa12.09□□□□□ -0.47
MRPL55-211ENST00000366738 CCDC9Q9Y3X0 531 aaKnown RBP12.09□□□□□ -0.47
MRPL55-211ENST00000366738 SPATA31E1Q6ZUB1 1445 aa12.09□□□□□ -0.47
MRPL55-211ENST00000366738 KIF1AQ12756 1690 aa12.09□□□□□ -0.47
MRPL55-211ENST00000366738 PLEKHH1Q9ULM0 1364 aa12.08□□□□□ -0.48
MRPL55-211ENST00000366738 WAPLQ7Z5K2 1190 aa12.08□□□□□ -0.48
MRPL55-211ENST00000366738 CCDC144AA2RUR9 1427 aa12.08□□□□□ -0.48
MRPL55-211ENST00000366738 IFT172Q9UG01 1749 aa12.08□□□□□ -0.48
MRPL55-211ENST00000366738 NWD2Q9ULI1 1742 aa12.08□□□□□ -0.48
MRPL55-211ENST00000366738 BAG6P46379 1132 aa12.07□□□□□ -0.48
MRPL55-211ENST00000366738 HAP1P54257 671 aaPredicted RBP12.07□□□□□ -0.48
MRPL55-211ENST00000366738 TNS3Q68CZ2 1445 aa12.07□□□□□ -0.48
MRPL55-211ENST00000366738 MPHOSPH9Q99550 1183 aa12.07□□□□□ -0.48
MRPL55-211ENST00000366738 STK26Q9P289 416 aa12.07□□□□□ -0.48
MRPL55-211ENST00000366738 TECPR2O15040 1411 aa12.06□□□□□ -0.48
MRPL55-211ENST00000366738 A0A0G2JS52 829 aa12.06□□□□□ -0.48
MRPL55-211ENST00000366738 MYT1Q01538 1121 aa12.06□□□□□ -0.48
MRPL55-211ENST00000366738 ONECUT3O60422 494 aaPredicted RBP12.05□□□□□ -0.48
MRPL55-211ENST00000366738 EN1Q05925 392 aaPredicted RBP12.05□□□□□ -0.48
MRPL55-211ENST00000366738 R3HDM1Q15032 1099 aaKnown RBP12.05□□□□□ -0.48
MRPL55-211ENST00000366738 RGL3Q3MIN7 710 aa12.05□□□□□ -0.48
MRPL55-211ENST00000366738 KRT28Q7Z3Y7 464 aa12.05□□□□□ -0.48
MRPL55-211ENST00000366738 RGPD1P0DJD0 1748 aa12.05□□□□□ -0.48
MRPL55-211ENST00000366738 NRAPQ86VF7 1730 aa12.05□□□□□ -0.48
MRPL55-211ENST00000366738 KNDC1Q76NI1 1749 aa12.04□□□□□ -0.48
MRPL55-211ENST00000366738 FAM182BQ5T319 152 aa12.04□□□□□ -0.48
MRPL55-211ENST00000366738 RGPD8O14715 1765 aaPredicted RBP12.04□□□□□ -0.48
MRPL55-211ENST00000366738 FAM98CQ17RN3 349 aaKnown RBP12.03□□□□□ -0.48
MRPL55-211ENST00000366738 TMEM132EQ6IEE7 984 aa12.03□□□□□ -0.48
MRPL55-211ENST00000366738 DHX57Q6P158 1386 aaKnown RBP12.03□□□□□ -0.48
MRPL55-211ENST00000366738 TNS1Q9HBL0 1735 aaKnown RBP12.03□□□□□ -0.48
MRPL55-211ENST00000366738 PIK3C2GO75747 1445 aa12.03□□□□□ -0.48
MRPL55-211ENST00000366738 LMOD2Q6P5Q4 547 aa12.02□□□□□ -0.49
MRPL55-211ENST00000366738 FAM83GA6ND36 823 aa12.01□□□□□ -0.49
MRPL55-211ENST00000366738 PHF8Q9UPP1 1060 aa12.01□□□□□ -0.49
MRPL55-211ENST00000366738 ABCC11Q96J66 1382 aa12□□□□□ -0.49
MRPL55-211ENST00000366738 ANKRD30BQ9BXX2 1392 aa12□□□□□ -0.49
MRPL55-211ENST00000366738 NRXN1Q9ULB1 1477 aa12□□□□□ -0.49
MRPL55-211ENST00000366738 EZH2Q15910 746 aaKnown RBP11.99□□□□□ -0.49
MRPL55-211ENST00000366738 SBNO1A3KN83 1393 aa11.99□□□□□ -0.49
MRPL55-211ENST00000366738 ARHGEF10O15013 1369 aa11.99□□□□□ -0.49
MRPL55-211ENST00000366738 DISP2A7MBM2 1401 aa11.99□□□□□ -0.49
MRPL55-211ENST00000366738 THSD7AQ9UPZ6 1657 aa11.99□□□□□ -0.49
MRPL55-211ENST00000366738 YTHDC2Q9H6S0 1430 aaKnown RBP11.98□□□□□ -0.49
MRPL55-211ENST00000366738 YY1P25490 414 aa11.98□□□□□ -0.49
MRPL55-211ENST00000366738 PSME1Q06323 249 aa11.98□□□□□ -0.49
MRPL55-211ENST00000366738 BTG4Q9NY30 223 aa11.98□□□□□ -0.49
MRPL55-211ENST00000366738 COL14A1Q05707 1796 aaKnown RBP11.97□□□□□ -0.49
MRPL55-211ENST00000366738 ADGRB2O60241 1585 aa11.96□□□□□ -0.49
MRPL55-211ENST00000366738 CFAP70Q5T0N1 1121 aa11.96□□□□□ -0.49
MRPL55-211ENST00000366738 C14orf93Q9H972 538 aaKnown RBP11.96□□□□□ -0.49
MRPL55-211ENST00000366738 TRPM3Q9HCF6 1732 aaPredicted RBP11.96□□□□□ -0.49
MRPL55-211ENST00000366738 SPATA31A5Q5VU36 1347 aa11.95□□□□□ -0.5
MRPL55-211ENST00000366738 SPATA31A7Q8IWB4 1347 aa11.95□□□□□ -0.5
MRPL55-211ENST00000366738 SAFB2Q14151 953 aaKnown RBP eCLIP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms