RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ORAI2Q96SN7 254 aa20.18■□□□□ 0.82
TNFRSF1A-202ENST00000366159 WAPLQ7Z5K2 1190 aa20.17■□□□□ 0.82
TNFRSF1A-202ENST00000366159 LRRC59Q96AG4 307 aaKnown RBP20.17■□□□□ 0.82
TNFRSF1A-202ENST00000366159 SIRT1Q96EB6 747 aa20.17■□□□□ 0.82
TNFRSF1A-202ENST00000366159 STK26Q9P289 416 aa20.16■□□□□ 0.82
TNFRSF1A-202ENST00000366159 PLEKHH1Q9ULM0 1364 aa20.16■□□□□ 0.82
TNFRSF1A-202ENST00000366159 CFAP70Q5T0N1 1121 aa20.15■□□□□ 0.82
TNFRSF1A-202ENST00000366159 SOS2Q07890 1332 aaPredicted RBP20.15■□□□□ 0.82
TNFRSF1A-202ENST00000366159 PNPLA6Q8IY17 1366 aa20.13■□□□□ 0.81
TNFRSF1A-202ENST00000366159 DHX57Q6P158 1386 aaKnown RBP20.11■□□□□ 0.81
TNFRSF1A-202ENST00000366159 ADGRB1O14514 1584 aa20.11■□□□□ 0.81
TNFRSF1A-202ENST00000366159 STAC3Q96MF2 364 aa20.09■□□□□ 0.81
TNFRSF1A-202ENST00000366159 DLC1Q96QB1 1528 aa20.08■□□□□ 0.81
TNFRSF1A-202ENST00000366159 FMN2Q9NZ56 1722 aa20.08■□□□□ 0.8
TNFRSF1A-202ENST00000366159 MEX3CQ5U5Q3 659 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-202ENST00000366159 PXDNQ92626 1479 aa20.07■□□□□ 0.8
TNFRSF1A-202ENST00000366159 NUTM2BA6NNL0 878 aaPredicted RBP20.06■□□□□ 0.8
TNFRSF1A-202ENST00000366159 NUTM2EB1AL46 878 aaPredicted RBP20.06■□□□□ 0.8
TNFRSF1A-202ENST00000366159 ESCO1Q5FWF5 840 aa20.06■□□□□ 0.8
TNFRSF1A-202ENST00000366159 ZNF772Q68DY9 489 aaPredicted RBP20.06■□□□□ 0.8
TNFRSF1A-202ENST00000366159 NUTM2AQ8IVF1 878 aaPredicted RBP20.06■□□□□ 0.8
TNFRSF1A-202ENST00000366159 DCAF11Q8TEB1 546 aa20.06■□□□□ 0.8
TNFRSF1A-202ENST00000366159 NPHP3Q7Z494 1330 aa20.05■□□□□ 0.8
TNFRSF1A-202ENST00000366159 COL22A1Q8NFW1 1626 aaPredicted RBP20.05■□□□□ 0.8
TNFRSF1A-202ENST00000366159 FOXO3O43524 673 aa20.02■□□□□ 0.8
TNFRSF1A-202ENST00000366159 PRAM1Q96QH2 718 aa20.02■□□□□ 0.8
TNFRSF1A-202ENST00000366159 KDM2AQ9Y2K7 1162 aa20.02■□□□□ 0.8
TNFRSF1A-202ENST00000366159 NUTM2FA1L443 756 aa20.02■□□□□ 0.79
TNFRSF1A-202ENST00000366159 AFF2P51816 1311 aa20.01■□□□□ 0.79
TNFRSF1A-202ENST00000366159 ADGRB2O60241 1585 aa20■□□□□ 0.79
TNFRSF1A-202ENST00000366159 KIF1AQ12756 1690 aa19.99■□□□□ 0.79
TNFRSF1A-202ENST00000366159 RGPD8O14715 1765 aaPredicted RBP19.98■□□□□ 0.79
TNFRSF1A-202ENST00000366159 XPCQ01831 940 aaPredicted RBP19.97■□□□□ 0.79
TNFRSF1A-202ENST00000366159 SAFB2Q14151 953 aaKnown RBP eCLIP19.97■□□□□ 0.79
TNFRSF1A-202ENST00000366159 C8orf37Q96NL8 207 aa19.97■□□□□ 0.79
TNFRSF1A-202ENST00000366159 TRAK1Q9UPV9 953 aa19.97■□□□□ 0.79
TNFRSF1A-202ENST00000366159 USP32Q8NFA0 1604 aa19.96■□□□□ 0.79
TNFRSF1A-202ENST00000366159 POGKQ9P215 609 aa19.96■□□□□ 0.79
TNFRSF1A-202ENST00000366159 CDK12Q9NYV4 1490 aaPredicted RBP19.95■□□□□ 0.78
TNFRSF1A-202ENST00000366159 ANKARQ7Z5J8 1434 aa19.94■□□□□ 0.78
TNFRSF1A-202ENST00000366159 ADAMTS2O95450 1211 aa19.94■□□□□ 0.78
TNFRSF1A-202ENST00000366159 RXRBP28702 533 aa19.94■□□□□ 0.78
TNFRSF1A-202ENST00000366159 PHF8Q9UPP1 1060 aa19.94■□□□□ 0.78
TNFRSF1A-202ENST00000366159 SPATA31A3Q5VYP0 1347 aa19.94■□□□□ 0.78
TNFRSF1A-202ENST00000366159 FNBP4Q8N3X1 1017 aaPredicted RBP19.93■□□□□ 0.78
TNFRSF1A-202ENST00000366159 KIAA1210Q9ULL0 1709 aa19.92■□□□□ 0.78
TNFRSF1A-202ENST00000366159 KRT28Q7Z3Y7 464 aa19.92■□□□□ 0.78
TNFRSF1A-202ENST00000366159 NGLY1Q96IV0 654 aa19.92■□□□□ 0.78
TNFRSF1A-202ENST00000366159 QTRT2Q9H974 415 aaKnown RBP19.92■□□□□ 0.78
TNFRSF1A-202ENST00000366159 ARHGEF28Q8N1W1 1705 aaKnown RBP19.91■□□□□ 0.78
TNFRSF1A-202ENST00000366159 MARF1Q9Y4F3 1742 aaKnown RBP19.9■□□□□ 0.78
TNFRSF1A-202ENST00000366159 WASLO00401 505 aaPredicted RBP19.89■□□□□ 0.77
TNFRSF1A-202ENST00000366159 HIRIP3Q9BW71 556 aaPredicted RBP19.89■□□□□ 0.77
TNFRSF1A-202ENST00000366159 MINK1Q8N4C8 1332 aaPredicted RBP19.89■□□□□ 0.77
TNFRSF1A-202ENST00000366159 PRR36Q9H6K5 1346 aa19.89■□□□□ 0.77
TNFRSF1A-202ENST00000366159 RBM6P78332 1123 aaKnown RBP19.88■□□□□ 0.77
TNFRSF1A-202ENST00000366159 SBNO1A3KN83 1393 aa19.88■□□□□ 0.77
TNFRSF1A-202ENST00000366159 TULP4Q9NRJ4 1543 aa19.88■□□□□ 0.77
TNFRSF1A-202ENST00000366159 TNS3Q68CZ2 1445 aa19.87■□□□□ 0.77
TNFRSF1A-202ENST00000366159 USP21Q9UK80 565 aa19.87■□□□□ 0.77
TNFRSF1A-202ENST00000366159 BCL9LQ86UU0 1499 aa19.86■□□□□ 0.77
TNFRSF1A-202ENST00000366159 PSME1Q06323 249 aa19.86■□□□□ 0.77
TNFRSF1A-202ENST00000366159 EIF3AQ14152 1382 aaKnown RBP19.85■□□□□ 0.77
TNFRSF1A-202ENST00000366159 NBPF1Q3BBV0 1214 aa19.85■□□□□ 0.77
TNFRSF1A-202ENST00000366159 PMFBP1Q8TBY8 1022 aa19.85■□□□□ 0.77
TNFRSF1A-202ENST00000366159 RGS12O14924 1447 aa19.85■□□□□ 0.77
TNFRSF1A-202ENST00000366159 ATRNO75882 1429 aa19.85■□□□□ 0.77
TNFRSF1A-202ENST00000366159 TRPM3Q9HCF6 1732 aaPredicted RBP19.84■□□□□ 0.77
TNFRSF1A-202ENST00000366159 UPF1Q92900 1129 aaKnown RBP eCLIP19.83■□□□□ 0.77
TNFRSF1A-202ENST00000366159 TRPC5Q9UL62 973 aaPredicted RBP19.83■□□□□ 0.77
TNFRSF1A-202ENST00000366159 L3MBTL2Q969R5 705 aa19.82■□□□□ 0.76
TNFRSF1A-202ENST00000366159 SLIT2O94813 1529 aa19.82■□□□□ 0.76
TNFRSF1A-202ENST00000366159 ATP7BP35670 1465 aa19.81■□□□□ 0.76
TNFRSF1A-202ENST00000366159 SIN3AQ96ST3 1273 aa19.81■□□□□ 0.76
TNFRSF1A-202ENST00000366159 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.8■□□□□ 0.76
TNFRSF1A-202ENST00000366159 ARHGEF10O15013 1369 aa19.8■□□□□ 0.76
TNFRSF1A-202ENST00000366159 ALS2Q96Q42 1657 aa19.8■□□□□ 0.76
TNFRSF1A-202ENST00000366159 ABCA3Q99758 1704 aa19.79■□□□□ 0.76
TNFRSF1A-202ENST00000366159 CABLES1Q8TDN4 633 aa19.78■□□□□ 0.76
TNFRSF1A-202ENST00000366159 NUDT16Q96DE0 195 aaKnown RBP19.77■□□□□ 0.76
TNFRSF1A-202ENST00000366159 CDK19Q9BWU1 502 aa19.77■□□□□ 0.76
TNFRSF1A-202ENST00000366159 GPRASP1Q5JY77 1395 aa19.76■□□□□ 0.75
TNFRSF1A-202ENST00000366159 ITSN1Q15811 1721 aa19.76■□□□□ 0.75
TNFRSF1A-202ENST00000366159 UNC5CLQ8IV45 518 aa19.76■□□□□ 0.75
TNFRSF1A-202ENST00000366159 TOPAZ1Q8N9V7 1692 aa19.75■□□□□ 0.75
TNFRSF1A-202ENST00000366159 GJD4Q96KN9 370 aaPredicted RBP19.75■□□□□ 0.75
TNFRSF1A-202ENST00000366159 POLR3AO14802 1390 aaPredicted RBP19.74■□□□□ 0.75
TNFRSF1A-202ENST00000366159 TRPM1Q7Z4N2 1603 aa19.74■□□□□ 0.75
TNFRSF1A-202ENST00000366159 CRYBG1Q9Y4K1 1723 aa19.73■□□□□ 0.75
TNFRSF1A-202ENST00000366159 PLEKHG3A1L390 1219 aa19.73■□□□□ 0.75
TNFRSF1A-202ENST00000366159 LMOD2Q6P5Q4 547 aa19.73■□□□□ 0.75
TNFRSF1A-202ENST00000366159 NGDNQ8NEJ9 315 aaKnown RBP19.73■□□□□ 0.75
TNFRSF1A-202ENST00000366159 CCDC61Q9Y6R9 512 aa19.72■□□□□ 0.75
TNFRSF1A-202ENST00000366159 GLI3P10071 1580 aa19.72■□□□□ 0.75
TNFRSF1A-202ENST00000366159 NWD2Q9ULI1 1742 aa19.72■□□□□ 0.75
TNFRSF1A-202ENST00000366159 CENPJQ9HC77 1338 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF1A-202ENST00000366159 PLCH1Q4KWH8 1693 aa19.71■□□□□ 0.75
TNFRSF1A-202ENST00000366159 FAM83GA6ND36 823 aa19.71■□□□□ 0.75
TNFRSF1A-202ENST00000366159 NEUROD1Q13562 356 aa19.71■□□□□ 0.75
TNFRSF1A-202ENST00000366159 RALGAPBQ86X10 1494 aa19.71■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms