RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 THEMISQ8N1K5 641 aaPredicted RBP11.82□□□□□ -0.52
CALD1-202ENST00000361901 NCKAP5LQ9HCH0 1330 aa11.82□□□□□ -0.52
CALD1-202ENST00000361901 RIMBP3Q9UFD9 1639 aa11.82□□□□□ -0.52
CALD1-202ENST00000361901 COG3Q96JB2 828 aa11.82□□□□□ -0.52
CALD1-202ENST00000361901 CLUAP1Q96AJ1 413 aa11.81□□□□□ -0.52
CALD1-202ENST00000361901 EXOC6Q8TAG9 804 aa11.81□□□□□ -0.52
CALD1-202ENST00000361901 ARAP3Q8WWN8 1544 aa11.81□□□□□ -0.52
CALD1-202ENST00000361901 IQGAP3Q86VI3 1631 aa11.8□□□□□ -0.52
CALD1-202ENST00000361901 HECW2Q9P2P5 1572 aa11.8□□□□□ -0.52
CALD1-202ENST00000361901 GPRASP1Q5JY77 1395 aa11.8□□□□□ -0.52
CALD1-202ENST00000361901 PTPRTO14522 1441 aa11.8□□□□□ -0.52
CALD1-202ENST00000361901 ELL2O00472 640 aaPredicted RBP11.79□□□□□ -0.52
CALD1-202ENST00000361901 TNRQ92752 1358 aa11.79□□□□□ -0.52
CALD1-202ENST00000361901 UNC13BO14795 1591 aa11.79□□□□□ -0.52
CALD1-202ENST00000361901 NUDT16Q96DE0 195 aaKnown RBP11.79□□□□□ -0.52
CALD1-202ENST00000361901 KDM5CP41229 1560 aa11.79□□□□□ -0.52
CALD1-202ENST00000361901 PDE3BQ13370 1112 aa11.79□□□□□ -0.52
CALD1-202ENST00000361901 TCP11L2Q8N4U5 519 aa11.79□□□□□ -0.52
CALD1-202ENST00000361901 PPP6R1Q9UPN7 881 aa11.79□□□□□ -0.52
CALD1-202ENST00000361901 DIAPH1O60610 1272 aaKnown RBP11.78□□□□□ -0.52
CALD1-202ENST00000361901 RRS1Q15050 365 aaKnown RBP11.78□□□□□ -0.52
CALD1-202ENST00000361901 AMOTL2Q9Y2J4 779 aa11.78□□□□□ -0.52
CALD1-202ENST00000361901 BCORL1Q5H9F3 1711 aa11.77□□□□□ -0.52
CALD1-202ENST00000361901 COL17A1Q9UMD9 1497 aaPredicted RBP11.77□□□□□ -0.52
CALD1-202ENST00000361901 TRPM2O94759 1503 aa11.77□□□□□ -0.52
CALD1-202ENST00000361901 RGS3P49796 1198 aa11.77□□□□□ -0.52
CALD1-202ENST00000361901 RIMS2Q9UQ26 1411 aa11.77□□□□□ -0.52
CALD1-202ENST00000361901 AMPHP49418 695 aa11.77□□□□□ -0.53
CALD1-202ENST00000361901 RRP1P56182 461 aaKnown RBP11.77□□□□□ -0.53
CALD1-202ENST00000361901 NME9Q86XW9 330 aa11.77□□□□□ -0.53
CALD1-202ENST00000361901 FTSJ3Q8IY81 847 aaKnown RBP11.77□□□□□ -0.53
CALD1-202ENST00000361901 CLTCL1P53675 1640 aa11.77□□□□□ -0.53
CALD1-202ENST00000361901 E9PCH4 1651 aa11.77□□□□□ -0.53
CALD1-202ENST00000361901 TCERG1O14776 1098 aaKnown RBP11.76□□□□□ -0.53
CALD1-202ENST00000361901 GSE1Q14687 1217 aa11.76□□□□□ -0.53
CALD1-202ENST00000361901 CFAP74Q9C0B2 1584 aa11.76□□□□□ -0.53
CALD1-202ENST00000361901 EIF2AK4Q9P2K8 1649 aaKnown RBP11.76□□□□□ -0.53
CALD1-202ENST00000361901 KIDINS220Q9ULH0 1771 aa11.76□□□□□ -0.53
CALD1-202ENST00000361901 CCDC61Q9Y6R9 512 aa11.75□□□□□ -0.53
CALD1-202ENST00000361901 HAP1P54257 671 aaPredicted RBP11.75□□□□□ -0.53
CALD1-202ENST00000361901 ZRANB1Q9UGI0 708 aa11.75□□□□□ -0.53
CALD1-202ENST00000361901 WASLO00401 505 aaPredicted RBP11.75□□□□□ -0.53
CALD1-202ENST00000361901 XPCQ01831 940 aaPredicted RBP11.75□□□□□ -0.53
CALD1-202ENST00000361901 RUNDC1Q96C34 613 aa11.75□□□□□ -0.53
CALD1-202ENST00000361901 PNNQ9H307 717 aaKnown RBP11.75□□□□□ -0.53
CALD1-202ENST00000361901 USP35Q9P2H5 1018 aa11.75□□□□□ -0.53
CALD1-202ENST00000361901 PARD3Q8TEW0 1356 aa11.75□□□□□ -0.53
CALD1-202ENST00000361901 RIPK4P57078 832 aa11.75□□□□□ -0.53
CALD1-202ENST00000361901 CRBNQ96SW2 442 aa11.75□□□□□ -0.53
CALD1-202ENST00000361901 ABCC3O15438 1527 aa11.74□□□□□ -0.53
CALD1-202ENST00000361901 ANKLE2Q86XL3 938 aa11.74□□□□□ -0.53
CALD1-202ENST00000361901 TET3O43151 1660 aa11.74□□□□□ -0.53
CALD1-202ENST00000361901 LTKP29376 864 aa11.74□□□□□ -0.53
CALD1-202ENST00000361901 NLRP6P59044 892 aa11.74□□□□□ -0.53
CALD1-202ENST00000361901 EFCAB6Q5THR3 1501 aa11.73□□□□□ -0.53
CALD1-202ENST00000361901 CEP152O94986 1710 aa11.73□□□□□ -0.53
CALD1-202ENST00000361901 INO80Q9ULG1 1556 aaPredicted RBP11.73□□□□□ -0.53
CALD1-202ENST00000361901 RBM10P98175 930 aaKnown RBP11.73□□□□□ -0.53
CALD1-202ENST00000361901 ATAD2Q6PL18 1390 aa11.73□□□□□ -0.53
CALD1-202ENST00000361901 ESCO1Q5FWF5 840 aa11.72□□□□□ -0.53
CALD1-202ENST00000361901 EMILIN1Q9Y6C2 1016 aa11.72□□□□□ -0.53
CALD1-202ENST00000361901 FYB1O15117 783 aa11.72□□□□□ -0.53
CALD1-202ENST00000361901 PSME1Q06323 249 aa11.72□□□□□ -0.53
CALD1-202ENST00000361901 E9PSI1 815 aa11.71□□□□□ -0.53
CALD1-202ENST00000361901 PRKAR2BP31323 418 aa11.71□□□□□ -0.53
CALD1-202ENST00000361901 MAGI2Q86UL8 1455 aa11.71□□□□□ -0.53
CALD1-202ENST00000361901 YTHDC2Q9H6S0 1430 aaKnown RBP11.71□□□□□ -0.53
CALD1-202ENST00000361901 A0A0G2JS52 829 aa11.71□□□□□ -0.53
CALD1-202ENST00000361901 BCAR3O75815 825 aa11.71□□□□□ -0.53
CALD1-202ENST00000361901 TSR2Q969E8 191 aaKnown RBP11.71□□□□□ -0.53
CALD1-202ENST00000361901 MYH16Q9H6N6 1097 aa11.71□□□□□ -0.54
CALD1-202ENST00000361901 SMC4Q9NTJ3 1288 aa11.71□□□□□ -0.54
CALD1-202ENST00000361901 PLEKHH1Q9ULM0 1364 aa11.71□□□□□ -0.54
CALD1-202ENST00000361901 SPHKAPQ2M3C7 1700 aa11.7□□□□□ -0.54
CALD1-202ENST00000361901 ABTB2Q8N961 1025 aa11.7□□□□□ -0.54
CALD1-202ENST00000361901 COG6Q9Y2V7 657 aa11.7□□□□□ -0.54
CALD1-202ENST00000361901 PROSER2Q86WR7 435 aaPredicted RBP11.7□□□□□ -0.54
CALD1-202ENST00000361901 ABCA6Q8N139 1617 aa11.7□□□□□ -0.54
CALD1-202ENST00000361901 KIF1BO60333 1816 aa11.7□□□□□ -0.54
CALD1-202ENST00000361901 RNF17Q9BXT8 1623 aaKnown RBP11.69□□□□□ -0.54
CALD1-202ENST00000361901 PDIA4P13667 645 aaKnown RBP11.69□□□□□ -0.54
CALD1-202ENST00000361901 THUMPD2Q9BTF0 503 aaKnown RBP11.69□□□□□ -0.54
CALD1-202ENST00000361901 PPRC1Q5VV67 1664 aaKnown RBP11.69□□□□□ -0.54
CALD1-202ENST00000361901 RTF1Q92541 710 aaKnown RBP11.68□□□□□ -0.54
CALD1-202ENST00000361901 TRPM1Q7Z4N2 1603 aa11.68□□□□□ -0.54
CALD1-202ENST00000361901 ASXL1Q8IXJ9 1541 aa11.68□□□□□ -0.54
CALD1-202ENST00000361901 A0A1W2PP64 1363 aa11.68□□□□□ -0.54
CALD1-202ENST00000361901 DIP2CQ9Y2E4 1556 aa11.68□□□□□ -0.54
CALD1-202ENST00000361901 WWC1Q8IX03 1113 aa11.67□□□□□ -0.54
CALD1-202ENST00000361901 PANK1Q8TE04 598 aa11.67□□□□□ -0.54
CALD1-202ENST00000361901 SMG6Q86US8 1419 aaKnown RBP11.67□□□□□ -0.54
CALD1-202ENST00000361901 C20orf194Q5TEA3 1177 aa11.67□□□□□ -0.54
CALD1-202ENST00000361901 PIK3C2GO75747 1445 aa11.67□□□□□ -0.54
CALD1-202ENST00000361901 METP08581 1390 aa11.67□□□□□ -0.54
CALD1-202ENST00000361901 KCNA6P17658 529 aa11.67□□□□□ -0.54
CALD1-202ENST00000361901 ACEP12821 1306 aa11.66□□□□□ -0.54
CALD1-202ENST00000361901 SULT6B1Q6IMI4 303 aa11.66□□□□□ -0.54
CALD1-202ENST00000361901 ITPRIPQ8IWB1 547 aa11.66□□□□□ -0.54
CALD1-202ENST00000361901 ERVK-7P63135 1459 aa11.66□□□□□ -0.54
CALD1-202ENST00000361901 ANKRD36BQ8N2N9 1353 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms