RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 TRIM6-TRIM34B2RNG4 842 aa14.25□□□□□ -0.13
CNOT4-203ENST00000361528 MFAP1P55081 439 aaKnown RBP14.25□□□□□ -0.13
CNOT4-203ENST00000361528 NOLC1Q14978 699 aaKnown RBP eCLIP14.25□□□□□ -0.13
CNOT4-203ENST00000361528 TRIM34Q9BYJ4 488 aa14.25□□□□□ -0.13
CNOT4-203ENST00000361528 BAG4O95429 457 aaKnown RBP14.25□□□□□ -0.13
CNOT4-203ENST00000361528 CAPN2P17655 700 aa14.25□□□□□ -0.13
CNOT4-203ENST00000361528 CHAF1AQ13111 956 aaPredicted RBP14.25□□□□□ -0.13
CNOT4-203ENST00000361528 TERF2Q15554 542 aa14.25□□□□□ -0.13
CNOT4-203ENST00000361528 SAMD1Q6SPF0 538 aaPredicted RBP14.25□□□□□ -0.13
CNOT4-203ENST00000361528 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.25□□□□□ -0.13
CNOT4-203ENST00000361528 PLEKHH1Q9ULM0 1364 aa14.24□□□□□ -0.13
CNOT4-203ENST00000361528 LRSAM1Q6UWE0 723 aa14.24□□□□□ -0.13
CNOT4-203ENST00000361528 PTMAP06454 111 aaKnown RBP14.23□□□□□ -0.13
CNOT4-203ENST00000361528 AMER1Q5JTC6 1135 aaPredicted RBP14.23□□□□□ -0.13
CNOT4-203ENST00000361528 RRP7BPQ9NSQ0 103 aa14.23□□□□□ -0.13
CNOT4-203ENST00000361528 PLXNC1O60486 1568 aa14.23□□□□□ -0.13
CNOT4-203ENST00000361528 EHBP1L1Q8N3D4 1523 aa14.23□□□□□ -0.13
CNOT4-203ENST00000361528 IGSF3O75054 1194 aa14.23□□□□□ -0.13
CNOT4-203ENST00000361528 PRIM1P49642 420 aaKnown RBP14.23□□□□□ -0.13
CNOT4-203ENST00000361528 TSC1Q92574 1164 aa14.23□□□□□ -0.13
CNOT4-203ENST00000361528 PDZRN3Q9UPQ7 1066 aa14.23□□□□□ -0.13
CNOT4-203ENST00000361528 MORC2Q9Y6X9 1032 aaPredicted RBP14.23□□□□□ -0.13
CNOT4-203ENST00000361528 ARHGEF11O15085 1522 aa14.22□□□□□ -0.13
CNOT4-203ENST00000361528 SOX12O15370 315 aa14.22□□□□□ -0.13
CNOT4-203ENST00000361528 APPP05067 770 aa14.22□□□□□ -0.13
CNOT4-203ENST00000361528 CTR9Q6PD62 1173 aa14.22□□□□□ -0.13
CNOT4-203ENST00000361528 DDX41Q9UJV9 622 aaKnown RBP14.22□□□□□ -0.13
CNOT4-203ENST00000361528 CAVIN1Q6NZI2 390 aaKnown RBP14.22□□□□□ -0.13
CNOT4-203ENST00000361528 CAMSAP2Q08AD1 1489 aa14.22□□□□□ -0.13
CNOT4-203ENST00000361528 RWDD1Q9H446 243 aaPredicted RBP14.21□□□□□ -0.13
CNOT4-203ENST00000361528 UGGT2Q9NYU1 1516 aa14.21□□□□□ -0.13
CNOT4-203ENST00000361528 IGF1RP08069 1367 aa14.21□□□□□ -0.13
CNOT4-203ENST00000361528 SHROOM2Q13796 1616 aa14.21□□□□□ -0.14
CNOT4-203ENST00000361528 AEBP1Q8IUX7 1158 aa14.21□□□□□ -0.14
CNOT4-203ENST00000361528 JARID2Q92833 1246 aaPredicted RBP14.2□□□□□ -0.14
CNOT4-203ENST00000361528 CTNNA3Q9UI47 895 aa14.2□□□□□ -0.14
CNOT4-203ENST00000361528 ATP1B4Q9UN42 357 aaPredicted RBP14.2□□□□□ -0.14
CNOT4-203ENST00000361528 ROCK1Q13464 1354 aa14.2□□□□□ -0.14
CNOT4-203ENST00000361528 PER1O15534 1290 aaPredicted RBP14.19□□□□□ -0.14
CNOT4-203ENST00000361528 CERS3Q8IU89 383 aa14.19□□□□□ -0.14
CNOT4-203ENST00000361528 NUCB2P80303 420 aa14.19□□□□□ -0.14
CNOT4-203ENST00000361528 NGEFQ8N5V2 710 aa14.19□□□□□ -0.14
CNOT4-203ENST00000361528 FEZ2Q9UHY8 353 aaPredicted RBP14.19□□□□□ -0.14
CNOT4-203ENST00000361528 UHRF1BP1LA0JNW5 1464 aa14.19□□□□□ -0.14
CNOT4-203ENST00000361528 K7ELQ4 463 aaPredicted RBP14.18□□□□□ -0.14
CNOT4-203ENST00000361528 HSP90B1P14625 803 aaKnown RBP14.18□□□□□ -0.14
CNOT4-203ENST00000361528 SSFA2P28290 1259 aa14.18□□□□□ -0.14
CNOT4-203ENST00000361528 HOMEZQ8IX15 550 aa14.18□□□□□ -0.14
CNOT4-203ENST00000361528 LMBRD1Q9NUN5 540 aa14.18□□□□□ -0.14
CNOT4-203ENST00000361528 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
CNOT4-203ENST00000361528 SNAPC4Q5SXM2 1469 aa14.18□□□□□ -0.14
CNOT4-203ENST00000361528 ARHGEF12Q9NZN5 1544 aa14.18□□□□□ -0.14
CNOT4-203ENST00000361528 SLC52A1Q9NWF4 448 aa14.18□□□□□ -0.14
CNOT4-203ENST00000361528 CARMIL1Q5VZK9 1371 aa14.18□□□□□ -0.14
CNOT4-203ENST00000361528 FHOD3Q2V2M9 1422 aa14.17□□□□□ -0.14
CNOT4-203ENST00000361528 MAPK8IP2Q13387 824 aaPredicted RBP14.17□□□□□ -0.14
CNOT4-203ENST00000361528 KRT222Q8N1A0 295 aa14.17□□□□□ -0.14
CNOT4-203ENST00000361528 ADAMTS8Q9UP79 889 aa14.17□□□□□ -0.14
CNOT4-203ENST00000361528 BCAR3O75815 825 aa14.16□□□□□ -0.14
CNOT4-203ENST00000361528 UVSSAQ2YD98 709 aa14.16□□□□□ -0.14
CNOT4-203ENST00000361528 CARD11Q9BXL7 1154 aa14.16□□□□□ -0.14
CNOT4-203ENST00000361528 YEATS2Q9ULM3 1422 aa14.16□□□□□ -0.14
CNOT4-203ENST00000361528 CADPSQ9ULU8 1353 aa14.16□□□□□ -0.14
CNOT4-203ENST00000361528 TNNT3P45378 269 aaPredicted RBP14.15□□□□□ -0.14
CNOT4-203ENST00000361528 CC2D1BQ5T0F9 858 aaKnown RBP14.15□□□□□ -0.14
CNOT4-203ENST00000361528 SAMD9Q5K651 1589 aa14.15□□□□□ -0.14
CNOT4-203ENST00000361528 RIOK3O14730 519 aaKnown RBP14.15□□□□□ -0.14
CNOT4-203ENST00000361528 CNPY4Q8N129 248 aa14.14□□□□□ -0.15
CNOT4-203ENST00000361528 FAM184AQ8NB25 1140 aa14.14□□□□□ -0.15
CNOT4-203ENST00000361528 CFTRP13569 1480 aa14.14□□□□□ -0.15
CNOT4-203ENST00000361528 TPM3P06753 285 aa14.14□□□□□ -0.15
CNOT4-203ENST00000361528 WDR43Q15061 677 aaKnown RBP eCLIP14.14□□□□□ -0.15
CNOT4-203ENST00000361528 MCTP1Q6DN14 999 aa14.14□□□□□ -0.15
CNOT4-203ENST00000361528 CNKSR2Q8WXI2 1034 aa14.14□□□□□ -0.15
CNOT4-203ENST00000361528 NESP48681 1621 aa14.13□□□□□ -0.15
CNOT4-203ENST00000361528 MBD3O95983 291 aa14.13□□□□□ -0.15
CNOT4-203ENST00000361528 MYCBPQ99417 103 aaPredicted RBP14.13□□□□□ -0.15
CNOT4-203ENST00000361528 BRMS1Q9HCU9 246 aa14.13□□□□□ -0.15
CNOT4-203ENST00000361528 COG6Q9Y2V7 657 aa14.13□□□□□ -0.15
CNOT4-203ENST00000361528 CYP2E1P05181 493 aaPredicted RBP14.13□□□□□ -0.15
CNOT4-203ENST00000361528 KCNG1Q9UIX4 513 aa14.13□□□□□ -0.15
CNOT4-203ENST00000361528 RAD50Q92878 1312 aa14.12□□□□□ -0.15
CNOT4-203ENST00000361528 ST20-MTHFSA0A0A6YYL1 179 aa14.12□□□□□ -0.15
CNOT4-203ENST00000361528 NCBP1Q09161 790 aaKnown RBP14.12□□□□□ -0.15
CNOT4-203ENST00000361528 CDCA8Q53HL2 280 aa14.12□□□□□ -0.15
CNOT4-203ENST00000361528 CEP120Q8N960 986 aa14.12□□□□□ -0.15
CNOT4-203ENST00000361528 KIF18AQ8NI77 898 aa14.12□□□□□ -0.15
CNOT4-203ENST00000361528 SLC4A1APQ9BWU0 796 aaKnown RBP14.12□□□□□ -0.15
CNOT4-203ENST00000361528 FAM53CQ9NYF3 392 aa14.12□□□□□ -0.15
CNOT4-203ENST00000361528 KIF16BQ96L93 1317 aa14.12□□□□□ -0.15
CNOT4-203ENST00000361528 ABCC2Q92887 1545 aa14.11□□□□□ -0.15
CNOT4-203ENST00000361528 NOP2P46087 812 aaKnown RBP14.11□□□□□ -0.15
CNOT4-203ENST00000361528 FAM177BA6PVY3 158 aa14.11□□□□□ -0.15
CNOT4-203ENST00000361528 MYCNP04198 464 aaPredicted RBP14.11□□□□□ -0.15
CNOT4-203ENST00000361528 NCAPGQ9BPX3 1015 aa14.11□□□□□ -0.15
CNOT4-203ENST00000361528 TSPY26PQ9H489 355 aa14.11□□□□□ -0.15
CNOT4-203ENST00000361528 CHIC2Q9UKJ5 165 aa14.11□□□□□ -0.15
CNOT4-203ENST00000361528 PCDHB15Q9Y5E8 787 aa14.11□□□□□ -0.15
CNOT4-203ENST00000361528 WWC1Q8IX03 1113 aa14.1□□□□□ -0.15
CNOT4-203ENST00000361528 GTF2A1P52655 376 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms