RNA–Protein interactions for RNA: ENST00000357898.3

SPSB1-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPSB1, Length 1,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-202ENST00000357898 LRP6O75581 1613 aa24.47■■□□□ 1.51
SPSB1-202ENST00000357898 ESCO1Q5FWF5 840 aa24.46■■□□□ 1.51
SPSB1-202ENST00000357898 CFAP70Q5T0N1 1121 aa24.45■■□□□ 1.51
SPSB1-202ENST00000357898 ZNF772Q68DY9 489 aaPredicted RBP24.45■■□□□ 1.51
SPSB1-202ENST00000357898 YTHDC2Q9H6S0 1430 aaKnown RBP24.45■■□□□ 1.5
SPSB1-202ENST00000357898 DHX57Q6P158 1386 aaKnown RBP24.44■■□□□ 1.5
SPSB1-202ENST00000357898 TECPR2O15040 1411 aa24.43■■□□□ 1.5
SPSB1-202ENST00000357898 NUTM2FA1L443 756 aa24.43■■□□□ 1.5
SPSB1-202ENST00000357898 KDM2AQ9Y2K7 1162 aa24.43■■□□□ 1.5
SPSB1-202ENST00000357898 MYOM2P54296 1465 aa24.42■■□□□ 1.5
SPSB1-202ENST00000357898 PLEKHH1Q9ULM0 1364 aa24.4■■□□□ 1.5
SPSB1-202ENST00000357898 DCAF11Q8TEB1 546 aa24.4■■□□□ 1.5
SPSB1-202ENST00000357898 CDC42BPGQ6DT37 1551 aa24.39■■□□□ 1.5
SPSB1-202ENST00000357898 PNPLA6Q8IY17 1366 aa24.39■■□□□ 1.5
SPSB1-202ENST00000357898 SIRT1Q96EB6 747 aa24.39■■□□□ 1.5
SPSB1-202ENST00000357898 NRXN1Q9ULB1 1477 aa24.39■■□□□ 1.49
SPSB1-202ENST00000357898 KNDC1Q76NI1 1749 aa24.38■■□□□ 1.49
SPSB1-202ENST00000357898 SOS2Q07890 1332 aaPredicted RBP24.38■■□□□ 1.49
SPSB1-202ENST00000357898 NPHP3Q7Z494 1330 aa24.37■■□□□ 1.49
SPSB1-202ENST00000357898 C8orf37Q96NL8 207 aa24.37■■□□□ 1.49
SPSB1-202ENST00000357898 LAMC1P11047 1609 aa24.37■■□□□ 1.49
SPSB1-202ENST00000357898 SAFB2Q14151 953 aaKnown RBP eCLIP24.36■■□□□ 1.49
SPSB1-202ENST00000357898 POGKQ9P215 609 aa24.36■■□□□ 1.49
SPSB1-202ENST00000357898 FOXO3O43524 673 aa24.35■■□□□ 1.49
SPSB1-202ENST00000357898 AFF2P51816 1311 aa24.35■■□□□ 1.49
SPSB1-202ENST00000357898 ADAMTS2O95450 1211 aa24.35■■□□□ 1.49
SPSB1-202ENST00000357898 PRAM1Q96QH2 718 aa24.35■■□□□ 1.49
SPSB1-202ENST00000357898 STAC3Q96MF2 364 aa24.34■■□□□ 1.49
SPSB1-202ENST00000357898 RXRBP28702 533 aa24.33■■□□□ 1.49
SPSB1-202ENST00000357898 XPCQ01831 940 aaPredicted RBP24.33■■□□□ 1.49
SPSB1-202ENST00000357898 NGLY1Q96IV0 654 aa24.32■■□□□ 1.48
SPSB1-202ENST00000357898 TRAK1Q9UPV9 953 aa24.31■■□□□ 1.48
SPSB1-202ENST00000357898 QTRT2Q9H974 415 aaKnown RBP24.27■■□□□ 1.48
SPSB1-202ENST00000357898 FMN2Q9NZ56 1722 aa24.26■■□□□ 1.47
SPSB1-202ENST00000357898 PHF8Q9UPP1 1060 aa24.25■■□□□ 1.47
SPSB1-202ENST00000357898 PXDNQ92626 1479 aa24.24■■□□□ 1.47
SPSB1-202ENST00000357898 KRT28Q7Z3Y7 464 aa24.24■■□□□ 1.47
SPSB1-202ENST00000357898 DLC1Q96QB1 1528 aa24.24■■□□□ 1.47
SPSB1-202ENST00000357898 PSME1Q06323 249 aa24.22■■□□□ 1.47
SPSB1-202ENST00000357898 HIRIP3Q9BW71 556 aaPredicted RBP24.22■■□□□ 1.47
SPSB1-202ENST00000357898 ADGRB1O14514 1584 aa24.21■■□□□ 1.47
SPSB1-202ENST00000357898 USP21Q9UK80 565 aa24.21■■□□□ 1.47
SPSB1-202ENST00000357898 MINK1Q8N4C8 1332 aaPredicted RBP24.21■■□□□ 1.47
SPSB1-202ENST00000357898 KIF1AQ12756 1690 aa24.21■■□□□ 1.47
SPSB1-202ENST00000357898 RBM6P78332 1123 aaKnown RBP24.2■■□□□ 1.46
SPSB1-202ENST00000357898 COL22A1Q8NFW1 1626 aaPredicted RBP24.18■■□□□ 1.46
SPSB1-202ENST00000357898 SPATA31A3Q5VYP0 1347 aa24.18■■□□□ 1.46
SPSB1-202ENST00000357898 RGPD8O14715 1765 aaPredicted RBP24.17■■□□□ 1.46
SPSB1-202ENST00000357898 HAP1P54257 671 aaPredicted RBP24.17■■□□□ 1.46
SPSB1-202ENST00000357898 LMOD2Q6P5Q4 547 aa24.17■■□□□ 1.46
SPSB1-202ENST00000357898 PMFBP1Q8TBY8 1022 aa24.17■■□□□ 1.46
SPSB1-202ENST00000357898 TRPC5Q9UL62 973 aaPredicted RBP24.16■■□□□ 1.46
SPSB1-202ENST00000357898 EIF3AQ14152 1382 aaKnown RBP24.15■■□□□ 1.46
SPSB1-202ENST00000357898 PLEKHG5O94827 1062 aa24.15■■□□□ 1.46
SPSB1-202ENST00000357898 FNBP4Q8N3X1 1017 aaPredicted RBP24.15■■□□□ 1.46
SPSB1-202ENST00000357898 ANKARQ7Z5J8 1434 aa24.14■■□□□ 1.46
SPSB1-202ENST00000357898 CDK12Q9NYV4 1490 aaPredicted RBP24.14■■□□□ 1.45
SPSB1-202ENST00000357898 WASLO00401 505 aaPredicted RBP24.13■■□□□ 1.45
SPSB1-202ENST00000357898 ADGRB2O60241 1585 aa24.11■■□□□ 1.45
SPSB1-202ENST00000357898 TNS3Q68CZ2 1445 aa24.1■■□□□ 1.45
SPSB1-202ENST00000357898 UPF1Q92900 1129 aaKnown RBP eCLIP24.09■■□□□ 1.45
SPSB1-202ENST00000357898 SBNO1A3KN83 1393 aa24.09■■□□□ 1.45
SPSB1-202ENST00000357898 GPRASP1Q5JY77 1395 aa24.09■■□□□ 1.45
SPSB1-202ENST00000357898 NGDNQ8NEJ9 315 aaKnown RBP24.08■■□□□ 1.44
SPSB1-202ENST00000357898 ARHGEF10O15013 1369 aa24.07■■□□□ 1.44
SPSB1-202ENST00000357898 CABLES1Q8TDN4 633 aa24.07■■□□□ 1.44
SPSB1-202ENST00000357898 USP32Q8NFA0 1604 aa24.07■■□□□ 1.44
SPSB1-202ENST00000357898 RGS12O14924 1447 aa24.06■■□□□ 1.44
SPSB1-202ENST00000357898 TULP4Q9NRJ4 1543 aa24.06■■□□□ 1.44
SPSB1-202ENST00000357898 PRR36Q9H6K5 1346 aa24.06■■□□□ 1.44
SPSB1-202ENST00000357898 MARF1Q9Y4F3 1742 aaKnown RBP24.05■■□□□ 1.44
SPSB1-202ENST00000357898 NEUROD1Q13562 356 aa24.05■■□□□ 1.44
SPSB1-202ENST00000357898 NBPF1Q3BBV0 1214 aa24.05■■□□□ 1.44
SPSB1-202ENST00000357898 ARHGEF28Q8N1W1 1705 aaKnown RBP24.04■■□□□ 1.44
SPSB1-202ENST00000357898 ATRNO75882 1429 aa24.03■■□□□ 1.44
SPSB1-202ENST00000357898 PAK3O75914 559 aaPredicted RBP24.03■■□□□ 1.44
SPSB1-202ENST00000357898 NUDT16Q96DE0 195 aaKnown RBP24.03■■□□□ 1.44
SPSB1-202ENST00000357898 SIN3AQ96ST3 1273 aa24.03■■□□□ 1.44
SPSB1-202ENST00000357898 CDK19Q9BWU1 502 aa24.03■■□□□ 1.44
SPSB1-202ENST00000357898 KIAA1210Q9ULL0 1709 aa24.03■■□□□ 1.44
SPSB1-202ENST00000357898 UNC5CLQ8IV45 518 aa24.02■■□□□ 1.44
SPSB1-202ENST00000357898 L3MBTL2Q969R5 705 aa24.02■■□□□ 1.44
SPSB1-202ENST00000357898 BCL9LQ86UU0 1499 aa24.02■■□□□ 1.44
SPSB1-202ENST00000357898 GJD4Q96KN9 370 aaPredicted RBP24.01■■□□□ 1.43
SPSB1-202ENST00000357898 CCDC9Q9Y3X0 531 aaKnown RBP23.96■■□□□ 1.43
SPSB1-202ENST00000357898 SLIT2O94813 1529 aa23.95■■□□□ 1.42
SPSB1-202ENST00000357898 ATAD2Q6PL18 1390 aa23.95■■□□□ 1.42
SPSB1-202ENST00000357898 CENPJQ9HC77 1338 aaPredicted RBP23.95■■□□□ 1.42
SPSB1-202ENST00000357898 SRPK2P78362 688 aaKnown RBP23.95■■□□□ 1.42
SPSB1-202ENST00000357898 CCDC61Q9Y6R9 512 aa23.95■■□□□ 1.42
SPSB1-202ENST00000357898 ITSN1Q15811 1721 aa23.94■■□□□ 1.42
SPSB1-202ENST00000357898 ATP7BP35670 1465 aa23.94■■□□□ 1.42
SPSB1-202ENST00000357898 FAM83GA6ND36 823 aa23.93■■□□□ 1.42
SPSB1-202ENST00000357898 TRPM3Q9HCF6 1732 aaPredicted RBP23.92■■□□□ 1.42
SPSB1-202ENST00000357898 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.91■■□□□ 1.42
SPSB1-202ENST00000357898 ACEP12821 1306 aa23.9■■□□□ 1.42
SPSB1-202ENST00000357898 VPS72Q15906 364 aa23.9■■□□□ 1.42
SPSB1-202ENST00000357898 RALGAPBQ86X10 1494 aa23.89■■□□□ 1.42
SPSB1-202ENST00000357898 NBPF8Q3BBV2 869 aa23.89■■□□□ 1.41
SPSB1-202ENST00000357898 ABCA3Q99758 1704 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms