RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 NAIPQ13075 1403 aa13.04□□□□□ -0.32
COL4A3BP-202ENST00000357457 PTCH1Q13635 1447 aa13.04□□□□□ -0.32
COL4A3BP-202ENST00000357457 PRAG1Q86YV5 1406 aa13.04□□□□□ -0.32
COL4A3BP-202ENST00000357457 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
COL4A3BP-202ENST00000357457 RPGRIP1LQ68CZ1 1315 aa13.03□□□□□ -0.32
COL4A3BP-202ENST00000357457 ROBO2Q9HCK4 1378 aa13.03□□□□□ -0.32
COL4A3BP-202ENST00000357457 ORAI2Q96SN7 254 aa13.02□□□□□ -0.33
COL4A3BP-202ENST00000357457 RRBP1Q9P2E9 1410 aaKnown RBP13.02□□□□□ -0.33
COL4A3BP-202ENST00000357457 FNBP4Q8N3X1 1017 aaPredicted RBP13.01□□□□□ -0.33
COL4A3BP-202ENST00000357457 NGLY1Q96IV0 654 aa13.01□□□□□ -0.33
COL4A3BP-202ENST00000357457 RGS12O14924 1447 aa13.01□□□□□ -0.33
COL4A3BP-202ENST00000357457 EP400Q96L91 3159 aa13□□□□□ -0.33
COL4A3BP-202ENST00000357457 HFM1A2PYH4 1435 aa12.99□□□□□ -0.33
COL4A3BP-202ENST00000357457 ADAMTS2O95450 1211 aa12.99□□□□□ -0.33
COL4A3BP-202ENST00000357457 RNF39Q9H2S5 420 aa12.99□□□□□ -0.33
COL4A3BP-202ENST00000357457 USP21Q9UK80 565 aa12.97□□□□□ -0.33
COL4A3BP-202ENST00000357457 TRPC5Q9UL62 973 aaPredicted RBP12.97□□□□□ -0.33
COL4A3BP-202ENST00000357457 PPLO60437 1756 aa12.97□□□□□ -0.33
COL4A3BP-202ENST00000357457 COL22A1Q8NFW1 1626 aaPredicted RBP12.95□□□□□ -0.34
COL4A3BP-202ENST00000357457 NPHP3Q7Z494 1330 aa12.94□□□□□ -0.34
COL4A3BP-202ENST00000357457 ATRNO75882 1429 aa12.94□□□□□ -0.34
COL4A3BP-202ENST00000357457 ATAD2Q6PL18 1390 aa12.94□□□□□ -0.34
COL4A3BP-202ENST00000357457 MYOM2P54296 1465 aa12.93□□□□□ -0.34
COL4A3BP-202ENST00000357457 ESCO1Q5FWF5 840 aa12.93□□□□□ -0.34
COL4A3BP-202ENST00000357457 BCL9LQ86UU0 1499 aa12.92□□□□□ -0.34
COL4A3BP-202ENST00000357457 CDC42BPGQ6DT37 1551 aa12.92□□□□□ -0.34
COL4A3BP-202ENST00000357457 PXDNQ92626 1479 aa12.91□□□□□ -0.34
COL4A3BP-202ENST00000357457 ADGRF5Q8IZF2 1346 aa12.91□□□□□ -0.34
COL4A3BP-202ENST00000357457 TECPR2O15040 1411 aa12.91□□□□□ -0.34
COL4A3BP-202ENST00000357457 FOXO3O43524 673 aa12.91□□□□□ -0.34
COL4A3BP-202ENST00000357457 ABCC11Q96J66 1382 aa12.91□□□□□ -0.34
COL4A3BP-202ENST00000357457 MARF1Q9Y4F3 1742 aaKnown RBP12.91□□□□□ -0.34
COL4A3BP-202ENST00000357457 WAPLQ7Z5K2 1190 aa12.9□□□□□ -0.34
COL4A3BP-202ENST00000357457 CCDC125Q86Z20 511 aa12.9□□□□□ -0.34
COL4A3BP-202ENST00000357457 LRPPRCP42704 1394 aaKnown RBP12.9□□□□□ -0.34
COL4A3BP-202ENST00000357457 SPATA31E1Q6ZUB1 1445 aa12.89□□□□□ -0.35
COL4A3BP-202ENST00000357457 ANKRD30BQ9BXX2 1392 aa12.89□□□□□ -0.35
COL4A3BP-202ENST00000357457 SIRT1Q96EB6 747 aa12.88□□□□□ -0.35
COL4A3BP-202ENST00000357457 GJD4Q96KN9 370 aaPredicted RBP12.88□□□□□ -0.35
COL4A3BP-202ENST00000357457 XPCQ01831 940 aaPredicted RBP12.87□□□□□ -0.35
COL4A3BP-202ENST00000357457 RGL3Q3MIN7 710 aa12.87□□□□□ -0.35
COL4A3BP-202ENST00000357457 TMEM132EQ6IEE7 984 aa12.87□□□□□ -0.35
COL4A3BP-202ENST00000357457 FOXD4L1Q9NU39 408 aa12.87□□□□□ -0.35
COL4A3BP-202ENST00000357457 STK26Q9P289 416 aa12.87□□□□□ -0.35
COL4A3BP-202ENST00000357457 CCDC144AA2RUR9 1427 aa12.87□□□□□ -0.35
COL4A3BP-202ENST00000357457 SPATA31A3Q5VYP0 1347 aa12.87□□□□□ -0.35
COL4A3BP-202ENST00000357457 IFT172Q9UG01 1749 aa12.86□□□□□ -0.35
COL4A3BP-202ENST00000357457 KNDC1Q76NI1 1749 aa12.85□□□□□ -0.35
COL4A3BP-202ENST00000357457 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.85□□□□□ -0.35
COL4A3BP-202ENST00000357457 PLEKHH1Q9ULM0 1364 aa12.85□□□□□ -0.35
COL4A3BP-202ENST00000357457 SLIT2O94813 1529 aa12.85□□□□□ -0.35
COL4A3BP-202ENST00000357457 NUTM2FA1L443 756 aa12.85□□□□□ -0.35
COL4A3BP-202ENST00000357457 UNC5CLQ8IV45 518 aa12.85□□□□□ -0.35
COL4A3BP-202ENST00000357457 MPHOSPH9Q99550 1183 aa12.85□□□□□ -0.35
COL4A3BP-202ENST00000357457 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
COL4A3BP-202ENST00000357457 C14orf93Q9H972 538 aaKnown RBP12.84□□□□□ -0.35
COL4A3BP-202ENST00000357457 PIK3C2GO75747 1445 aa12.84□□□□□ -0.35
COL4A3BP-202ENST00000357457 FMN2Q9NZ56 1722 aa12.83□□□□□ -0.36
COL4A3BP-202ENST00000357457 YTHDC2Q9H6S0 1430 aaKnown RBP12.83□□□□□ -0.36
COL4A3BP-202ENST00000357457 KRT28Q7Z3Y7 464 aa12.83□□□□□ -0.36
COL4A3BP-202ENST00000357457 KIF1AQ12756 1690 aa12.82□□□□□ -0.36
COL4A3BP-202ENST00000357457 GLI3P10071 1580 aa12.81□□□□□ -0.36
COL4A3BP-202ENST00000357457 RGPD8O14715 1765 aaPredicted RBP12.81□□□□□ -0.36
COL4A3BP-202ENST00000357457 RALGAPBQ86X10 1494 aa12.81□□□□□ -0.36
COL4A3BP-202ENST00000357457 ONECUT3O60422 494 aaPredicted RBP12.81□□□□□ -0.36
COL4A3BP-202ENST00000357457 PSME1Q06323 249 aa12.8□□□□□ -0.36
COL4A3BP-202ENST00000357457 PHF8Q9UPP1 1060 aa12.8□□□□□ -0.36
COL4A3BP-202ENST00000357457 BRWD3Q6RI45 1802 aa12.8□□□□□ -0.36
COL4A3BP-202ENST00000357457 NRXN1Q9ULB1 1477 aa12.79□□□□□ -0.36
COL4A3BP-202ENST00000357457 VPS72Q15906 364 aa12.79□□□□□ -0.36
COL4A3BP-202ENST00000357457 USP32Q8NFA0 1604 aa12.79□□□□□ -0.36
COL4A3BP-202ENST00000357457 ACIN1Q9UKV3 1341 aaKnown RBP12.79□□□□□ -0.36
COL4A3BP-202ENST00000357457 SBNO1A3KN83 1393 aa12.79□□□□□ -0.36
COL4A3BP-202ENST00000357457 BLMP54132 1417 aaPredicted RBP12.79□□□□□ -0.36
COL4A3BP-202ENST00000357457 CFAP70Q5T0N1 1121 aa12.78□□□□□ -0.36
COL4A3BP-202ENST00000357457 DHX57Q6P158 1386 aaKnown RBP12.78□□□□□ -0.36
COL4A3BP-202ENST00000357457 TNS3Q68CZ2 1445 aa12.78□□□□□ -0.36
COL4A3BP-202ENST00000357457 C1QBPQ07021 282 aaKnown RBP12.77□□□□□ -0.37
COL4A3BP-202ENST00000357457 SEPT12Q8IYM1 358 aa12.77□□□□□ -0.37
COL4A3BP-202ENST00000357457 NWD2Q9ULI1 1742 aa12.76□□□□□ -0.37
COL4A3BP-202ENST00000357457 ZBTB22O15209 634 aa12.76□□□□□ -0.37
COL4A3BP-202ENST00000357457 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
COL4A3BP-202ENST00000357457 CABLES1Q8TDN4 633 aa12.76□□□□□ -0.37
COL4A3BP-202ENST00000357457 FAM83GA6ND36 823 aa12.75□□□□□ -0.37
COL4A3BP-202ENST00000357457 ARHGEF10O15013 1369 aa12.75□□□□□ -0.37
COL4A3BP-202ENST00000357457 PRAM1Q96QH2 718 aa12.75□□□□□ -0.37
COL4A3BP-202ENST00000357457 DEFB132Q7Z7B7 95 aa12.74□□□□□ -0.37
COL4A3BP-202ENST00000357457 DLC1Q96QB1 1528 aa12.73□□□□□ -0.37
COL4A3BP-202ENST00000357457 ANKARQ7Z5J8 1434 aa12.73□□□□□ -0.37
COL4A3BP-202ENST00000357457 HAP1P54257 671 aaPredicted RBP12.73□□□□□ -0.37
COL4A3BP-202ENST00000357457 KRT27Q7Z3Y8 459 aa12.73□□□□□ -0.37
COL4A3BP-202ENST00000357457 ABCA3Q99758 1704 aa12.72□□□□□ -0.37
COL4A3BP-202ENST00000357457 SAFB2Q14151 953 aaKnown RBP eCLIP12.72□□□□□ -0.37
COL4A3BP-202ENST00000357457 PMFBP1Q8TBY8 1022 aa12.72□□□□□ -0.37
COL4A3BP-202ENST00000357457 PLCH1Q4KWH8 1693 aa12.72□□□□□ -0.37
COL4A3BP-202ENST00000357457 SF3B2Q13435 895 aaKnown RBP12.71□□□□□ -0.37
COL4A3BP-202ENST00000357457 LMOD2Q6P5Q4 547 aa12.71□□□□□ -0.37
COL4A3BP-202ENST00000357457 POGKQ9P215 609 aa12.71□□□□□ -0.37
COL4A3BP-202ENST00000357457 ADGRB2O60241 1585 aa12.7□□□□□ -0.38
COL4A3BP-202ENST00000357457 CCDC9Q9Y3X0 531 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms