RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 CPS1P31327 1500 aa31.02■■■□□ 2.56
SCAMP3-202ENST00000355379 SETD1BQ9UPS6 1966 aaKnown RBP31.02■■■□□ 2.56
SCAMP3-202ENST00000355379 PLPPR3Q6T4P5 718 aa31.02■■■□□ 2.56
SCAMP3-202ENST00000355379 FAM135BQ49AJ0 1406 aa31.01■■■□□ 2.55
SCAMP3-202ENST00000355379 NINLQ9Y2I6 1382 aa31■■■□□ 2.55
SCAMP3-202ENST00000355379 CC2D1BQ5T0F9 858 aaKnown RBP31■■■□□ 2.55
SCAMP3-202ENST00000355379 NLRP13Q86W25 1043 aa31■■■□□ 2.55
SCAMP3-202ENST00000355379 TMC1Q8TDI8 760 aa30.99■■■□□ 2.55
SCAMP3-202ENST00000355379 DIP2AQ14689 1571 aa30.98■■■□□ 2.55
SCAMP3-202ENST00000355379 USP32Q8NFA0 1604 aa30.98■■■□□ 2.55
SCAMP3-202ENST00000355379 SAFB2Q14151 953 aaKnown RBP eCLIP30.97■■■□□ 2.55
SCAMP3-202ENST00000355379 BCANQ96GW7 911 aa30.97■■■□□ 2.55
SCAMP3-202ENST00000355379 FAM9BQ8IZU0 186 aa30.96■■■□□ 2.55
SCAMP3-202ENST00000355379 ATAD2Q6PL18 1390 aa30.96■■■□□ 2.55
SCAMP3-202ENST00000355379 CARD14Q9BXL6 1004 aa30.95■■■□□ 2.55
SCAMP3-202ENST00000355379 MINK1Q8N4C8 1332 aaPredicted RBP30.95■■■□□ 2.55
SCAMP3-202ENST00000355379 PNISRQ8TF01 805 aaKnown RBP30.94■■■□□ 2.54
SCAMP3-202ENST00000355379 SLC12A5Q9H2X9 1139 aa30.93■■■□□ 2.54
SCAMP3-202ENST00000355379 CABP2Q9NPB3 220 aa30.93■■■□□ 2.54
SCAMP3-202ENST00000355379 ANKRD36BQ8N2N9 1353 aa30.92■■■□□ 2.54
SCAMP3-202ENST00000355379 PLEKHH1Q9ULM0 1364 aa30.91■■■□□ 2.54
SCAMP3-202ENST00000355379 HNRNPUQ00839 825 aaKnown RBP eCLIP30.91■■■□□ 2.54
SCAMP3-202ENST00000355379 TBX22Q9Y458 520 aa30.91■■■□□ 2.54
SCAMP3-202ENST00000355379 SRPK2P78362 688 aaKnown RBP30.89■■■□□ 2.54
SCAMP3-202ENST00000355379 WAPLQ7Z5K2 1190 aa30.89■■■□□ 2.54
SCAMP3-202ENST00000355379 NSD3Q9BZ95 1437 aa30.87■■■□□ 2.53
SCAMP3-202ENST00000355379 CDK19Q9BWU1 502 aa30.87■■■□□ 2.53
SCAMP3-202ENST00000355379 PPP2R1AP30153 589 aa30.83■■■□□ 2.53
SCAMP3-202ENST00000355379 SCAF1Q9H7N4 1312 aaKnown RBP30.83■■■□□ 2.53
SCAMP3-202ENST00000355379 ADGRB2O60241 1585 aa30.83■■■□□ 2.53
SCAMP3-202ENST00000355379 PTPRUQ92729 1446 aa30.82■■■□□ 2.52
SCAMP3-202ENST00000355379 INSRP06213 1382 aa30.81■■■□□ 2.52
SCAMP3-202ENST00000355379 ROBO2Q9HCK4 1378 aa30.8■■■□□ 2.52
SCAMP3-202ENST00000355379 SLC26A8Q96RN1 970 aa30.8■■■□□ 2.52
SCAMP3-202ENST00000355379 NSD2O96028 1365 aa30.79■■■□□ 2.52
SCAMP3-202ENST00000355379 PIK3R4Q99570 1358 aa30.79■■■□□ 2.52
SCAMP3-202ENST00000355379 WASLO00401 505 aaPredicted RBP30.78■■■□□ 2.52
SCAMP3-202ENST00000355379 XRN1Q8IZH2 1706 aaKnown RBP30.78■■■□□ 2.52
SCAMP3-202ENST00000355379 TERF2IPQ9NYB0 399 aa30.78■■■□□ 2.52
SCAMP3-202ENST00000355379 PTCH1Q13635 1447 aa30.78■■■□□ 2.52
SCAMP3-202ENST00000355379 CGNL1Q0VF96 1302 aa30.77■■■□□ 2.52
SCAMP3-202ENST00000355379 ZBED9Q6R2W3 1325 aa30.77■■■□□ 2.52
SCAMP3-202ENST00000355379 CD163L1Q9NR16 1453 aa30.77■■■□□ 2.52
SCAMP3-202ENST00000355379 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.77■■■□□ 2.52
SCAMP3-202ENST00000355379 ANKLE2Q86XL3 938 aa30.77■■■□□ 2.52
SCAMP3-202ENST00000355379 GTF3C3Q9Y5Q9 886 aa30.77■■■□□ 2.52
SCAMP3-202ENST00000355379 A0A1W2PP64 1363 aa30.76■■■□□ 2.52
SCAMP3-202ENST00000355379 ATP7BP35670 1465 aa30.75■■■□□ 2.51
SCAMP3-202ENST00000355379 AMOTL2Q9Y2J4 779 aa30.73■■■□□ 2.51
SCAMP3-202ENST00000355379 ANKRD26Q9UPS8 1709 aa30.73■■■□□ 2.51
SCAMP3-202ENST00000355379 HDGFL2Q7Z4V5 671 aaPredicted RBP30.71■■■□□ 2.51
SCAMP3-202ENST00000355379 CHD2O14647 1828 aaKnown RBP30.69■■■□□ 2.5
SCAMP3-202ENST00000355379 CABP1Q9NZU7 370 aa30.68■■■□□ 2.5
SCAMP3-202ENST00000355379 MORC1Q86VD1 984 aa30.68■■■□□ 2.5
SCAMP3-202ENST00000355379 KIF20BQ96Q89 1820 aa30.67■■■□□ 2.5
SCAMP3-202ENST00000355379 BLMP54132 1417 aaPredicted RBP30.64■■■□□ 2.5
SCAMP3-202ENST00000355379 PPIP5K1Q6PFW1 1433 aa30.64■■■□□ 2.5
SCAMP3-202ENST00000355379 CDC42BPGQ6DT37 1551 aa30.64■■■□□ 2.5
SCAMP3-202ENST00000355379 TOPAZ1Q8N9V7 1692 aa30.64■■■□□ 2.49
SCAMP3-202ENST00000355379 AKAP12Q02952 1782 aa30.63■■■□□ 2.49
SCAMP3-202ENST00000355379 NUDT16Q96DE0 195 aaKnown RBP30.63■■■□□ 2.49
SCAMP3-202ENST00000355379 CPSF1Q10570 1443 aaKnown RBP30.63■■■□□ 2.49
SCAMP3-202ENST00000355379 CCDC61Q9Y6R9 512 aa30.63■■■□□ 2.49
SCAMP3-202ENST00000355379 ITSN1Q15811 1721 aa30.62■■■□□ 2.49
SCAMP3-202ENST00000355379 POLR3AO14802 1390 aaPredicted RBP30.62■■■□□ 2.49
SCAMP3-202ENST00000355379 MON2Q7Z3U7 1717 aa30.61■■■□□ 2.49
SCAMP3-202ENST00000355379 NPHP4O75161 1426 aaPredicted RBP30.6■■■□□ 2.49
SCAMP3-202ENST00000355379 WDR43Q15061 677 aaKnown RBP eCLIP30.56■■■□□ 2.48
SCAMP3-202ENST00000355379 EDC4Q6P2E9 1401 aaKnown RBP30.56■■■□□ 2.48
SCAMP3-202ENST00000355379 PRR36Q9H6K5 1346 aa30.56■■■□□ 2.48
SCAMP3-202ENST00000355379 FYB1O15117 783 aa30.55■■■□□ 2.48
SCAMP3-202ENST00000355379 KCNA6P17658 529 aa30.53■■■□□ 2.48
SCAMP3-202ENST00000355379 ZNF692Q9BU19 519 aaPredicted RBP30.52■■■□□ 2.48
SCAMP3-202ENST00000355379 ADAMTS8Q9UP79 889 aa30.52■■■□□ 2.48
SCAMP3-202ENST00000355379 SHPRHQ149N8 1683 aa30.5■■■□□ 2.47
SCAMP3-202ENST00000355379 PLEKHG3A1L390 1219 aa30.49■■■□□ 2.47
SCAMP3-202ENST00000355379 FMN2Q9NZ56 1722 aa30.48■■■□□ 2.47
SCAMP3-202ENST00000355379 GGNBP2Q9H3C7 697 aa30.48■■■□□ 2.47
SCAMP3-202ENST00000355379 NWD1Q149M9 1564 aa30.47■■■□□ 2.47
SCAMP3-202ENST00000355379 ANKARQ7Z5J8 1434 aa30.46■■■□□ 2.47
SCAMP3-202ENST00000355379 SMG6Q86US8 1419 aaKnown RBP30.46■■■□□ 2.47
SCAMP3-202ENST00000355379 NRKQ7Z2Y5 1582 aa30.46■■■□□ 2.47
SCAMP3-202ENST00000355379 TNNT2P45379 298 aaPredicted RBP30.45■■■□□ 2.47
SCAMP3-202ENST00000355379 CFAP53Q96M91 514 aa30.45■■■□□ 2.47
SCAMP3-202ENST00000355379 NCKAP5LQ9HCH0 1330 aa30.44■■■□□ 2.46
SCAMP3-202ENST00000355379 MTHFSP49914 203 aa30.44■■■□□ 2.46
SCAMP3-202ENST00000355379 NALCNQ8IZF0 1738 aa30.44■■■□□ 2.46
SCAMP3-202ENST00000355379 RGPD8O14715 1765 aaPredicted RBP30.44■■■□□ 2.46
SCAMP3-202ENST00000355379 NKTRP30414 1462 aaKnown RBP30.41■■■□□ 2.46
SCAMP3-202ENST00000355379 PDE3BQ13370 1112 aa30.41■■■□□ 2.46
SCAMP3-202ENST00000355379 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.39■■■□□ 2.46
SCAMP3-202ENST00000355379 NUDCQ9Y266 331 aa30.38■■■□□ 2.45
SCAMP3-202ENST00000355379 ACEP12821 1306 aa30.38■■■□□ 2.45
SCAMP3-202ENST00000355379 USP6P35125 1406 aa30.36■■■□□ 2.45
SCAMP3-202ENST00000355379 ADGRL3Q9HAR2 1447 aa30.34■■■□□ 2.45
SCAMP3-202ENST00000355379 KDM4FA0A1W2PPD8 638 aa30.34■■■□□ 2.45
SCAMP3-202ENST00000355379 COL3A1P02461 1466 aaPredicted RBP30.34■■■□□ 2.45
SCAMP3-202ENST00000355379 MAP2P11137 1827 aaKnown RBP30.33■■■□□ 2.45
SCAMP3-202ENST00000355379 SSH2Q76I76 1423 aa30.33■■■□□ 2.45
SCAMP3-202ENST00000355379 NUTM2FA1L443 756 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms