RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 OLFM4Q6UX06 510 aa9.59□□□□□ -0.87
HTT-201ENST00000355072 EHBP1Q8NDI1 1231 aa9.59□□□□□ -0.87
HTT-201ENST00000355072 CCDC112Q8NEF3 446 aa9.59□□□□□ -0.87
HTT-201ENST00000355072 RRP7BPQ9NSQ0 103 aa9.59□□□□□ -0.87
HTT-201ENST00000355072 SAFBQ15424 915 aaKnown RBP eCLIP9.59□□□□□ -0.87
HTT-201ENST00000355072 HMGB2P26583 209 aaKnown RBP9.58□□□□□ -0.88
HTT-201ENST00000355072 KIAA1328Q86T90 577 aa9.58□□□□□ -0.88
HTT-201ENST00000355072 NOL10Q9BSC4 688 aaKnown RBP9.58□□□□□ -0.88
HTT-201ENST00000355072 NFKBIBQ15653 356 aa9.58□□□□□ -0.88
HTT-201ENST00000355072 LRRCC1Q9C099 1032 aa9.58□□□□□ -0.88
HTT-201ENST00000355072 FILIP1LQ4L180 1135 aa9.57□□□□□ -0.88
HTT-201ENST00000355072 CARMIL1Q5VZK9 1371 aa9.57□□□□□ -0.88
HTT-201ENST00000355072 WIZO95785 1651 aa9.57□□□□□ -0.88
HTT-201ENST00000355072 SWAP70Q9UH65 585 aa9.57□□□□□ -0.88
HTT-201ENST00000355072 EIF2AK4Q9P2K8 1649 aaKnown RBP9.57□□□□□ -0.88
HTT-201ENST00000355072 P3H3Q8IVL6 736 aa9.57□□□□□ -0.88
HTT-201ENST00000355072 V9GYY5 206 aaPredicted RBP9.57□□□□□ -0.88
HTT-201ENST00000355072 THOC2Q8NI27 1593 aaKnown RBP9.57□□□□□ -0.88
HTT-201ENST00000355072 EIF4G1Q04637 1599 aaKnown RBP9.57□□□□□ -0.88
HTT-201ENST00000355072 MYOM3Q5VTT5 1437 aa9.56□□□□□ -0.88
HTT-201ENST00000355072 DESP17661 470 aa9.56□□□□□ -0.88
HTT-201ENST00000355072 ZNF396Q96N95 335 aaPredicted RBP9.56□□□□□ -0.88
HTT-201ENST00000355072 PAXBP1Q9Y5B6 917 aa9.56□□□□□ -0.88
HTT-201ENST00000355072 CFAP45Q9UL16 551 aa9.56□□□□□ -0.88
HTT-201ENST00000355072 CCAR2Q8N163 923 aaKnown RBP9.56□□□□□ -0.88
HTT-201ENST00000355072 MAP3K1Q13233 1512 aa9.56□□□□□ -0.88
HTT-201ENST00000355072 BICD2Q8TD16 824 aa9.56□□□□□ -0.88
HTT-201ENST00000355072 ESPNB1AK53 854 aa9.56□□□□□ -0.88
HTT-201ENST00000355072 SRRTQ9BXP5 876 aaKnown RBP9.56□□□□□ -0.88
HTT-201ENST00000355072 TSPY26PQ9H489 355 aa9.56□□□□□ -0.88
HTT-201ENST00000355072 CUX2O14529 1486 aa9.55□□□□□ -0.88
HTT-201ENST00000355072 CPLX1O14810 134 aa9.55□□□□□ -0.88
HTT-201ENST00000355072 ZSCAN12O43309 604 aa9.55□□□□□ -0.88
HTT-201ENST00000355072 GTPBP4Q9BZE4 634 aaKnown RBP9.55□□□□□ -0.88
HTT-201ENST00000355072 ODF2Q5BJF6 829 aa9.55□□□□□ -0.88
HTT-201ENST00000355072 DCAF11Q8TEB1 546 aa9.55□□□□□ -0.88
HTT-201ENST00000355072 RBM28Q9NW13 759 aaKnown RBP9.55□□□□□ -0.88
HTT-201ENST00000355072 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.55□□□□□ -0.88
HTT-201ENST00000355072 ERICH2A1L162 156 aa9.55□□□□□ -0.88
HTT-201ENST00000355072 HOOK3Q86VS8 718 aa9.55□□□□□ -0.88
HTT-201ENST00000355072 TRDNQ13061 729 aa9.55□□□□□ -0.88
HTT-201ENST00000355072 ANKS4BQ8N8V4 417 aa9.55□□□□□ -0.88
HTT-201ENST00000355072 CHMP3Q9Y3E7 222 aa9.55□□□□□ -0.88
HTT-201ENST00000355072 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.55□□□□□ -0.88
HTT-201ENST00000355072 STIM1Q13586 685 aa9.54□□□□□ -0.88
HTT-201ENST00000355072 AMER1Q5JTC6 1135 aaPredicted RBP9.54□□□□□ -0.88
HTT-201ENST00000355072 TXLNAP40222 546 aa9.54□□□□□ -0.88
HTT-201ENST00000355072 GSDMDP57764 484 aa9.54□□□□□ -0.88
HTT-201ENST00000355072 PDE3AQ14432 1141 aa9.54□□□□□ -0.88
HTT-201ENST00000355072 SART3Q15020 963 aaKnown RBP9.54□□□□□ -0.88
HTT-201ENST00000355072 IMMTQ16891 758 aaKnown RBP9.54□□□□□ -0.88
HTT-201ENST00000355072 PRKRIP1Q9H875 184 aaPredicted RBP9.54□□□□□ -0.88
HTT-201ENST00000355072 GORABQ5T7V8 394 aa9.54□□□□□ -0.88
HTT-201ENST00000355072 FAM114A1Q8IWE2 563 aa9.54□□□□□ -0.88
HTT-201ENST00000355072 CCDC141Q6ZP82 1450 aa9.54□□□□□ -0.88
HTT-201ENST00000355072 TCEAL9Q9UHQ7 104 aa9.54□□□□□ -0.88
HTT-201ENST00000355072 TRIM21P19474 475 aaKnown RBP9.53□□□□□ -0.88
HTT-201ENST00000355072 EPS15P42566 896 aa9.53□□□□□ -0.88
HTT-201ENST00000355072 SRCIN1Q9C0H9 1055 aa9.53□□□□□ -0.88
HTT-201ENST00000355072 CCDC83Q8IWF9 413 aa9.53□□□□□ -0.88
HTT-201ENST00000355072 HSPA5P11021 654 aaKnown RBP9.53□□□□□ -0.88
HTT-201ENST00000355072 WDR33Q9C0J8 1336 aaKnown RBP9.53□□□□□ -0.88
HTT-201ENST00000355072 TRIM5Q9C035 493 aa9.53□□□□□ -0.88
HTT-201ENST00000355072 KIF20AO95235 890 aa9.53□□□□□ -0.88
HTT-201ENST00000355072 SPECC1LQ69YQ0 1117 aa9.53□□□□□ -0.88
HTT-201ENST00000355072 STMN4Q9H169 189 aaPredicted RBP9.53□□□□□ -0.88
HTT-201ENST00000355072 CDC45O75419 566 aa9.52□□□□□ -0.88
HTT-201ENST00000355072 CLUAP1Q96AJ1 413 aa9.52□□□□□ -0.88
HTT-201ENST00000355072 FILIP1Q7Z7B0 1213 aa9.52□□□□□ -0.88
HTT-201ENST00000355072 CFAP57Q96MR6 1250 aa9.52□□□□□ -0.88
HTT-201ENST00000355072 KLHL34Q8N239 644 aa9.52□□□□□ -0.89
HTT-201ENST00000355072 API5Q9BZZ5 524 aaKnown RBP9.52□□□□□ -0.89
HTT-201ENST00000355072 SMG6Q86US8 1419 aaKnown RBP9.52□□□□□ -0.89
HTT-201ENST00000355072 TMCO3Q6UWJ1 677 aa9.52□□□□□ -0.89
HTT-201ENST00000355072 KIF18AQ8NI77 898 aa9.52□□□□□ -0.89
HTT-201ENST00000355072 GCOM1H8Y6P7 765 aaPredicted RBP9.52□□□□□ -0.89
HTT-201ENST00000355072 MYZAPP0CAP1 466 aa9.52□□□□□ -0.89
HTT-201ENST00000355072 CDKL5O76039 1030 aa9.52□□□□□ -0.89
HTT-201ENST00000355072 DNAJC21Q5F1R6 531 aaKnown RBP9.52□□□□□ -0.89
HTT-201ENST00000355072 PDS5BQ9NTI5 1447 aa9.52□□□□□ -0.89
HTT-201ENST00000355072 STAMBPO95630 424 aa9.51□□□□□ -0.89
HTT-201ENST00000355072 CCDC91Q7Z6B0 441 aa9.51□□□□□ -0.89
HTT-201ENST00000355072 ZNF592Q92610 1267 aa9.51□□□□□ -0.89
HTT-201ENST00000355072 GCC1Q96CN9 775 aa9.51□□□□□ -0.89
HTT-201ENST00000355072 CT47A1Q5JQC4 288 aaPredicted RBP9.51□□□□□ -0.89
HTT-201ENST00000355072 CTTNBP2Q8WZ74 1663 aa9.51□□□□□ -0.89
HTT-201ENST00000355072 DZIP1LQ8IYY4 767 aaKnown RBP9.51□□□□□ -0.89
HTT-201ENST00000355072 C22orf23Q9BZE7 217 aa9.51□□□□□ -0.89
HTT-201ENST00000355072 CTAGE5O15320 804 aa9.51□□□□□ -0.89
HTT-201ENST00000355072 PRPF40AO75400 957 aaKnown RBP9.51□□□□□ -0.89
HTT-201ENST00000355072 GIGYF2Q6Y7W6 1299 aaKnown RBP9.51□□□□□ -0.89
HTT-201ENST00000355072 SMC3Q9UQE7 1217 aa9.51□□□□□ -0.89
HTT-201ENST00000355072 NEUROD2Q15784 382 aa9.51□□□□□ -0.89
HTT-201ENST00000355072 ZMYM3Q14202 1370 aa9.51□□□□□ -0.89
HTT-201ENST00000355072 DNAI2Q9GZS0 605 aa9.51□□□□□ -0.89
HTT-201ENST00000355072 TIGD1Q96MW7 591 aa9.51□□□□□ -0.89
HTT-201ENST00000355072 ZNF397Q8NF99 534 aaPredicted RBP9.5□□□□□ -0.89
HTT-201ENST00000355072 NUP155O75694 1391 aa9.5□□□□□ -0.89
HTT-201ENST00000355072 CEP57L1Q8IYX8 460 aa9.5□□□□□ -0.89
HTT-201ENST00000355072 TAOK3Q9H2K8 898 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms