RNA–Protein interactions for RNA: ENST00000350092.8

PTBP1-202, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-202ENST00000350092 SLC24A1O60721 1099 aa20.49■□□□□ 0.87
PTBP1-202ENST00000350092 CFAP70Q5T0N1 1121 aa20.49■□□□□ 0.87
PTBP1-202ENST00000350092 ADGRB2O60241 1585 aa20.49■□□□□ 0.87
PTBP1-202ENST00000350092 LMTK2Q8IWU2 1503 aa20.49■□□□□ 0.87
PTBP1-202ENST00000350092 AFAP1Q8N556 730 aa20.48■□□□□ 0.87
PTBP1-202ENST00000350092 PANK1Q8TE04 598 aa20.48■□□□□ 0.87
PTBP1-202ENST00000350092 KANK1Q14678 1352 aa20.48■□□□□ 0.87
PTBP1-202ENST00000350092 ADGRB1O14514 1584 aa20.47■□□□□ 0.87
PTBP1-202ENST00000350092 COG6Q9Y2V7 657 aa20.46■□□□□ 0.87
PTBP1-202ENST00000350092 KIDINS220Q9ULH0 1771 aa20.46■□□□□ 0.87
PTBP1-202ENST00000350092 ZNF518AQ6AHZ1 1483 aa20.45■□□□□ 0.86
PTBP1-202ENST00000350092 NSD3Q9BZ95 1437 aa20.45■□□□□ 0.86
PTBP1-202ENST00000350092 RARSP54136 660 aaKnown RBP20.44■□□□□ 0.86
PTBP1-202ENST00000350092 AAMPQ13685 434 aa20.43■□□□□ 0.86
PTBP1-202ENST00000350092 ANTXR1Q9H6X2 564 aa20.43■□□□□ 0.86
PTBP1-202ENST00000350092 FANCAO15360 1455 aa20.43■□□□□ 0.86
PTBP1-202ENST00000350092 RLBP1P12271 317 aa20.4■□□□□ 0.86
PTBP1-202ENST00000350092 PCDHB15Q9Y5E8 787 aa20.4■□□□□ 0.86
PTBP1-202ENST00000350092 RUNDC1Q96C34 613 aa20.4■□□□□ 0.86
PTBP1-202ENST00000350092 ARHGEF28Q8N1W1 1705 aaKnown RBP20.4■□□□□ 0.86
PTBP1-202ENST00000350092 TNNQ9UQP3 1299 aa20.4■□□□□ 0.86
PTBP1-202ENST00000350092 PMFBP1Q8TBY8 1022 aa20.39■□□□□ 0.85
PTBP1-202ENST00000350092 ADGRL1O94910 1474 aa20.39■□□□□ 0.85
PTBP1-202ENST00000350092 NOS1P29475 1434 aa20.39■□□□□ 0.85
PTBP1-202ENST00000350092 WDR63Q8IWG1 891 aa20.38■□□□□ 0.85
PTBP1-202ENST00000350092 TBC1D32Q96NH3 1257 aa20.38■□□□□ 0.85
PTBP1-202ENST00000350092 CCDC27Q2M243 656 aa20.38■□□□□ 0.85
PTBP1-202ENST00000350092 POGKQ9P215 609 aa20.37■□□□□ 0.85
PTBP1-202ENST00000350092 CANXP27824 592 aaKnown RBP20.37■□□□□ 0.85
PTBP1-202ENST00000350092 BECN1Q14457 450 aa20.37■□□□□ 0.85
PTBP1-202ENST00000350092 NCBP3Q53F19 620 aaKnown RBP20.36■□□□□ 0.85
PTBP1-202ENST00000350092 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.36■□□□□ 0.85
PTBP1-202ENST00000350092 FAM43AQ8N2R8 423 aa20.36■□□□□ 0.85
PTBP1-202ENST00000350092 TCP11L2Q8N4U5 519 aa20.35■□□□□ 0.85
PTBP1-202ENST00000350092 GLI2P10070 1586 aa20.35■□□□□ 0.85
PTBP1-202ENST00000350092 KIF3BO15066 747 aa20.35■□□□□ 0.85
PTBP1-202ENST00000350092 PDZRN3Q9UPQ7 1066 aa20.35■□□□□ 0.85
PTBP1-202ENST00000350092 TULP4Q9NRJ4 1543 aa20.35■□□□□ 0.85
PTBP1-202ENST00000350092 RRP7AQ9Y3A4 280 aaKnown RBP20.34■□□□□ 0.85
PTBP1-202ENST00000350092 MORC1Q86VD1 984 aa20.33■□□□□ 0.85
PTBP1-202ENST00000350092 ANKRD26Q9UPS8 1709 aa20.33■□□□□ 0.84
PTBP1-202ENST00000350092 HECW2Q9P2P5 1572 aa20.31■□□□□ 0.84
PTBP1-202ENST00000350092 TBC1D2Q9BYX2 928 aa20.31■□□□□ 0.84
PTBP1-202ENST00000350092 FRMPD1Q5SYB0 1578 aa20.31■□□□□ 0.84
PTBP1-202ENST00000350092 PIK3C2BO00750 1634 aa20.31■□□□□ 0.84
PTBP1-202ENST00000350092 SLKQ9H2G2 1235 aaPredicted RBP20.3■□□□□ 0.84
PTBP1-202ENST00000350092 SIGLEC1Q9BZZ2 1709 aa20.29■□□□□ 0.84
PTBP1-202ENST00000350092 SLC12A5Q9H2X9 1139 aa20.29■□□□□ 0.84
PTBP1-202ENST00000350092 CAMSAP1Q5T5Y3 1602 aa20.29■□□□□ 0.84
PTBP1-202ENST00000350092 COL3A1P02461 1466 aaPredicted RBP20.29■□□□□ 0.84
PTBP1-202ENST00000350092 C14orf93Q9H972 538 aaKnown RBP20.28■□□□□ 0.84
PTBP1-202ENST00000350092 NEUROD2Q15784 382 aa20.28■□□□□ 0.84
PTBP1-202ENST00000350092 NSD2O96028 1365 aa20.28■□□□□ 0.84
PTBP1-202ENST00000350092 MVPQ14764 893 aaKnown RBP20.28■□□□□ 0.84
PTBP1-202ENST00000350092 RWDD1Q9H446 243 aaPredicted RBP20.27■□□□□ 0.84
PTBP1-202ENST00000350092 NPATQ14207 1427 aa20.27■□□□□ 0.83
PTBP1-202ENST00000350092 BCL2L13Q9BXK5 485 aa20.26■□□□□ 0.83
PTBP1-202ENST00000350092 MTHFSP49914 203 aa20.26■□□□□ 0.83
PTBP1-202ENST00000350092 CFAP65Q6ZU64 1925 aaKnown RBP20.25■□□□□ 0.83
PTBP1-202ENST00000350092 CD109Q6YHK3 1445 aa20.25■□□□□ 0.83
PTBP1-202ENST00000350092 ANKRD36BQ8N2N9 1353 aa20.25■□□□□ 0.83
PTBP1-202ENST00000350092 TNNT2P45379 298 aaPredicted RBP20.25■□□□□ 0.83
PTBP1-202ENST00000350092 NEXMIFQ5QGS0 1516 aa20.24■□□□□ 0.83
PTBP1-202ENST00000350092 UPF2Q9HAU5 1272 aaKnown RBP20.24■□□□□ 0.83
PTBP1-202ENST00000350092 TRAK1Q9UPV9 953 aa20.24■□□□□ 0.83
PTBP1-202ENST00000350092 PUS7Q96PZ0 661 aaKnown RBP20.23■□□□□ 0.83
PTBP1-202ENST00000350092 MYH16Q9H6N6 1097 aa20.23■□□□□ 0.83
PTBP1-202ENST00000350092 CT47B1P0C2W7 299 aaPredicted RBP20.22■□□□□ 0.83
PTBP1-202ENST00000350092 CLTCQ00610 1675 aaKnown RBP20.22■□□□□ 0.83
PTBP1-202ENST00000350092 ABCC3O15438 1527 aa20.21■□□□□ 0.83
PTBP1-202ENST00000350092 L1TD1Q5T7N2 865 aaKnown RBP20.21■□□□□ 0.83
PTBP1-202ENST00000350092 NCOA3Q9Y6Q9 1424 aa20.21■□□□□ 0.83
PTBP1-202ENST00000350092 FSD2A1L4K1 749 aa20.21■□□□□ 0.83
PTBP1-202ENST00000350092 ZKSCAN2Q63HK3 967 aa20.21■□□□□ 0.83
PTBP1-202ENST00000350092 CFAP53Q96M91 514 aa20.21■□□□□ 0.83
PTBP1-202ENST00000350092 HDAC1Q13547 482 aaPredicted RBP20.2■□□□□ 0.82
PTBP1-202ENST00000350092 DZIP1LQ8IYY4 767 aaKnown RBP20.19■□□□□ 0.82
PTBP1-202ENST00000350092 PLEKHF1Q96S99 279 aa20.19■□□□□ 0.82
PTBP1-202ENST00000350092 RRAGDQ9NQL2 400 aaPredicted RBP20.18■□□□□ 0.82
PTBP1-202ENST00000350092 RPGRIP1LQ68CZ1 1315 aa20.18■□□□□ 0.82
PTBP1-202ENST00000350092 CFAP74Q9C0B2 1584 aa20.18■□□□□ 0.82
PTBP1-202ENST00000350092 ABCC11Q96J66 1382 aa20.17■□□□□ 0.82
PTBP1-202ENST00000350092 MCM4P33991 863 aa20.17■□□□□ 0.82
PTBP1-202ENST00000350092 RSPH6AQ9H0K4 717 aa20.17■□□□□ 0.82
PTBP1-202ENST00000350092 CDC42BPGQ6DT37 1551 aa20.16■□□□□ 0.82
PTBP1-202ENST00000350092 TMEM132EQ6IEE7 984 aa20.16■□□□□ 0.82
PTBP1-202ENST00000350092 ZNF692Q9BU19 519 aaPredicted RBP20.16■□□□□ 0.82
PTBP1-202ENST00000350092 KIF20BQ96Q89 1820 aa20.16■□□□□ 0.82
PTBP1-202ENST00000350092 MED14O60244 1454 aa20.15■□□□□ 0.82
PTBP1-202ENST00000350092 TRIM27P14373 513 aa20.15■□□□□ 0.82
PTBP1-202ENST00000350092 C22orf23Q9BZE7 217 aa20.15■□□□□ 0.82
PTBP1-202ENST00000350092 TSR2Q969E8 191 aaKnown RBP20.15■□□□□ 0.82
PTBP1-202ENST00000350092 TRIM35Q9UPQ4 493 aa20.15■□□□□ 0.82
PTBP1-202ENST00000350092 ASXL2Q76L83 1435 aa20.14■□□□□ 0.81
PTBP1-202ENST00000350092 DDIT3P35638 169 aa20.14■□□□□ 0.81
PTBP1-202ENST00000350092 SMC5Q8IY18 1101 aa20.14■□□□□ 0.81
PTBP1-202ENST00000350092 MLH3Q9UHC1 1453 aa20.14■□□□□ 0.81
PTBP1-202ENST00000350092 U2AF1L5P0DN76 240 aaPredicted RBP20.13■□□□□ 0.81
PTBP1-202ENST00000350092 U2AF1Q01081 240 aaKnown RBP eCLIP20.13■□□□□ 0.819e-17■■□□□ 14.4
PTBP1-202ENST00000350092 POGZQ7Z3K3 1410 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms