RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 TSPY10P0CW01 314 aa17.94■□□□□ 0.46
RLIM-202ENST00000349225 NASPP49321 788 aaPredicted RBP17.94■□□□□ 0.46
RLIM-202ENST00000349225 RWDD1Q9H446 243 aaPredicted RBP17.94■□□□□ 0.46
RLIM-202ENST00000349225 NEUROD2Q15784 382 aa17.93■□□□□ 0.46
RLIM-202ENST00000349225 KIF2CQ99661 725 aa17.93■□□□□ 0.46
RLIM-202ENST00000349225 FOXD4L1Q9NU39 408 aa17.93■□□□□ 0.46
RLIM-202ENST00000349225 R3HCC1Q9Y3T6 440 aaKnown RBP17.93■□□□□ 0.46
RLIM-202ENST00000349225 NPC1L1Q9UHC9 1359 aa17.93■□□□□ 0.46
RLIM-202ENST00000349225 A0A0U1RQG5 324 aaPredicted RBP17.92■□□□□ 0.46
RLIM-202ENST00000349225 RBM25P49756 843 aaKnown RBP17.92■□□□□ 0.46
RLIM-202ENST00000349225 SNX21Q969T3 373 aa17.91■□□□□ 0.46
RLIM-202ENST00000349225 ARID3AQ99856 593 aa17.91■□□□□ 0.46
RLIM-202ENST00000349225 SHPRHQ149N8 1683 aa17.91■□□□□ 0.46
RLIM-202ENST00000349225 AK9Q5TCS8 1911 aa17.91■□□□□ 0.46
RLIM-202ENST00000349225 TERF1P54274 439 aa17.9■□□□□ 0.46
RLIM-202ENST00000349225 AAMPQ13685 434 aa17.9■□□□□ 0.46
RLIM-202ENST00000349225 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.9■□□□□ 0.46
RLIM-202ENST00000349225 CARD14Q9BXL6 1004 aa17.9■□□□□ 0.46
RLIM-202ENST00000349225 MVPQ14764 893 aaKnown RBP17.89■□□□□ 0.46
RLIM-202ENST00000349225 SSFA2P28290 1259 aa17.89■□□□□ 0.45
RLIM-202ENST00000349225 XPCQ01831 940 aaPredicted RBP17.89■□□□□ 0.45
RLIM-202ENST00000349225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.89■□□□□ 0.45
RLIM-202ENST00000349225 MADDQ8WXG6 1647 aa17.89■□□□□ 0.45
RLIM-202ENST00000349225 UNC13BO14795 1591 aa17.88■□□□□ 0.45
RLIM-202ENST00000349225 GBP4Q96PP9 640 aa17.88■□□□□ 0.45
RLIM-202ENST00000349225 PHF23Q9BUL5 403 aaPredicted RBP17.88■□□□□ 0.45
RLIM-202ENST00000349225 IQSEC2Q5JU85 1478 aa17.88■□□□□ 0.45
RLIM-202ENST00000349225 ARHGEF5Q12774 1597 aa17.88■□□□□ 0.45
RLIM-202ENST00000349225 SKOR2Q2VWA4 1001 aaPredicted RBP17.88■□□□□ 0.45
RLIM-202ENST00000349225 SCAPERQ9BY12 1400 aa17.88■□□□□ 0.45
RLIM-202ENST00000349225 CEP152O94986 1710 aa17.87■□□□□ 0.45
RLIM-202ENST00000349225 CIZ1Q9ULV3 898 aaPredicted RBP17.87■□□□□ 0.45
RLIM-202ENST00000349225 MSNP26038 577 aaKnown RBP17.87■□□□□ 0.45
RLIM-202ENST00000349225 PRDM10Q9NQV6 1147 aa17.86■□□□□ 0.45
RLIM-202ENST00000349225 UQCRHLA0A096LP55 91 aa17.86■□□□□ 0.45
RLIM-202ENST00000349225 UQCRHP07919 91 aa17.86■□□□□ 0.45
RLIM-202ENST00000349225 RBM42Q9BTD8 480 aaKnown RBP17.86■□□□□ 0.45
RLIM-202ENST00000349225 NGEFQ8N5V2 710 aa17.85■□□□□ 0.45
RLIM-202ENST00000349225 HSP90AB1P08238 724 aaKnown RBP17.85■□□□□ 0.45
RLIM-202ENST00000349225 ZNF500O60304 480 aaPredicted RBP17.84■□□□□ 0.45
RLIM-202ENST00000349225 NOL7Q9UMY1 257 aaKnown RBP17.84■□□□□ 0.45
RLIM-202ENST00000349225 SAMD9LQ8IVG5 1584 aa17.84■□□□□ 0.45
RLIM-202ENST00000349225 TCP11L2Q8N4U5 519 aa17.84■□□□□ 0.45
RLIM-202ENST00000349225 GAS2L2Q8NHY3 880 aa17.84■□□□□ 0.45
RLIM-202ENST00000349225 ZHX1Q9UKY1 873 aaPredicted RBP17.84■□□□□ 0.45
RLIM-202ENST00000349225 IBTKQ9P2D0 1353 aaPredicted RBP17.83■□□□□ 0.45
RLIM-202ENST00000349225 IQGAP3Q86VI3 1631 aa17.83■□□□□ 0.44
RLIM-202ENST00000349225 KLHL40Q2TBA0 621 aa17.83■□□□□ 0.44
RLIM-202ENST00000349225 SMAP1Q8IYB5 467 aaPredicted RBP17.83■□□□□ 0.44
RLIM-202ENST00000349225 PDLIM2Q96JY6 352 aa17.83■□□□□ 0.44
RLIM-202ENST00000349225 RBSNQ9H1K0 784 aa17.83■□□□□ 0.44
RLIM-202ENST00000349225 HDAC1Q13547 482 aaPredicted RBP17.82■□□□□ 0.44
RLIM-202ENST00000349225 POLR3AO14802 1390 aaPredicted RBP17.82■□□□□ 0.44
RLIM-202ENST00000349225 MAP7D2Q96T17 732 aa17.81■□□□□ 0.44
RLIM-202ENST00000349225 SCAF11Q99590 1463 aaKnown RBP17.81■□□□□ 0.44
RLIM-202ENST00000349225 BAG4O95429 457 aaKnown RBP17.81■□□□□ 0.44
RLIM-202ENST00000349225 CLEC17AQ6ZS10 378 aa17.81■□□□□ 0.44
RLIM-202ENST00000349225 DDX49Q9Y6V7 483 aaKnown RBP17.81■□□□□ 0.44
RLIM-202ENST00000349225 ATP10AO60312 1499 aa17.81■□□□□ 0.44
RLIM-202ENST00000349225 KDM5AP29375 1690 aaKnown RBP17.81■□□□□ 0.44
RLIM-202ENST00000349225 JARID2Q92833 1246 aaPredicted RBP17.81■□□□□ 0.44
RLIM-202ENST00000349225 DZIP1LQ8IYY4 767 aaKnown RBP17.8■□□□□ 0.44
RLIM-202ENST00000349225 ZNF445P59923 1031 aa17.8■□□□□ 0.44
RLIM-202ENST00000349225 CDC42BPBQ9Y5S2 1711 aa17.79■□□□□ 0.44
RLIM-202ENST00000349225 ARHGAP31Q2M1Z3 1444 aa17.79■□□□□ 0.44
RLIM-202ENST00000349225 TRIM27P14373 513 aa17.79■□□□□ 0.44
RLIM-202ENST00000349225 ZSCAN23Q3MJ62 389 aa17.78■□□□□ 0.44
RLIM-202ENST00000349225 CDCA8Q53HL2 280 aa17.78■□□□□ 0.44
RLIM-202ENST00000349225 RUNDC1Q96C34 613 aa17.78■□□□□ 0.44
RLIM-202ENST00000349225 UHRF1BP1LA0JNW5 1464 aa17.78■□□□□ 0.44
RLIM-202ENST00000349225 ATP10BO94823 1461 aa17.78■□□□□ 0.44
RLIM-202ENST00000349225 PLEKHD1A6NEE1 506 aa17.78■□□□□ 0.44
RLIM-202ENST00000349225 K7ELQ4 463 aaPredicted RBP17.78■□□□□ 0.44
RLIM-202ENST00000349225 HS1BP3Q53T59 392 aa17.78■□□□□ 0.44
RLIM-202ENST00000349225 ERCC6L2Q5T890 1561 aa17.78■□□□□ 0.44
RLIM-202ENST00000349225 ZKSCAN2Q63HK3 967 aa17.78■□□□□ 0.44
RLIM-202ENST00000349225 WDR63Q8IWG1 891 aa17.78■□□□□ 0.44
RLIM-202ENST00000349225 PRIM1P49642 420 aaKnown RBP17.77■□□□□ 0.44
RLIM-202ENST00000349225 CAVIN1Q6NZI2 390 aaKnown RBP17.77■□□□□ 0.44
RLIM-202ENST00000349225 ERVK-7P63135 1459 aa17.77■□□□□ 0.43
RLIM-202ENST00000349225 KANK1Q14678 1352 aa17.76■□□□□ 0.43
RLIM-202ENST00000349225 PKP1Q13835 747 aa17.76■□□□□ 0.43
RLIM-202ENST00000349225 FTSJ3Q8IY81 847 aaKnown RBP17.76■□□□□ 0.43
RLIM-202ENST00000349225 LNPKQ9C0E8 428 aa17.76■□□□□ 0.43
RLIM-202ENST00000349225 TNNT2P45379 298 aaPredicted RBP17.76■□□□□ 0.43
RLIM-202ENST00000349225 ZSCAN20P17040 1043 aaPredicted RBP17.75■□□□□ 0.43
RLIM-202ENST00000349225 TSR2Q969E8 191 aaKnown RBP17.75■□□□□ 0.43
RLIM-202ENST00000349225 ZKSCAN5Q9Y2L8 839 aa17.75■□□□□ 0.43
RLIM-202ENST00000349225 DYNC1I1O14576 645 aa17.75■□□□□ 0.43
RLIM-202ENST00000349225 PTMSP20962 102 aa17.75■□□□□ 0.43
RLIM-202ENST00000349225 NUCB1Q02818 461 aa17.75■□□□□ 0.43
RLIM-202ENST00000349225 ANP32BQ92688 251 aaKnown RBP17.75■□□□□ 0.43
RLIM-202ENST00000349225 LMBRD1Q9NUN5 540 aa17.75■□□□□ 0.43
RLIM-202ENST00000349225 SPHKAPQ2M3C7 1700 aa17.75■□□□□ 0.43
RLIM-202ENST00000349225 MCTP1Q6DN14 999 aa17.74■□□□□ 0.43
RLIM-202ENST00000349225 ITPRIPQ8IWB1 547 aa17.74■□□□□ 0.43
RLIM-202ENST00000349225 RBM27Q9P2N5 1060 aaKnown RBP17.73■□□□□ 0.43
RLIM-202ENST00000349225 CHAMP1Q96JM3 812 aa17.73■□□□□ 0.43
RLIM-202ENST00000349225 SYCP2Q9BX26 1530 aa17.73■□□□□ 0.43
RLIM-202ENST00000349225 DMTNQ08495 405 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms