RNA–Protein interactions for RNA: ENST00000348911.10

SBF1-201, Transcript of SET binding factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SBF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-201ENST00000348911 RNF214Q8ND24 703 aa18.6■□□□□ 0.57
SBF1-201ENST00000348911 ANO8Q9HCE9 1232 aaPredicted RBP18.6■□□□□ 0.57
SBF1-201ENST00000348911 NINLQ9Y2I6 1382 aa18.6■□□□□ 0.57
SBF1-201ENST00000348911 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.59■□□□□ 0.57
SBF1-201ENST00000348911 TMEM132EQ6IEE7 984 aa18.59■□□□□ 0.57
SBF1-201ENST00000348911 NCAPD3P42695 1498 aa18.59■□□□□ 0.57
SBF1-201ENST00000348911 TSR1Q2NL82 804 aaKnown RBP18.59■□□□□ 0.57
SBF1-201ENST00000348911 IFT57Q9NWB7 429 aa18.59■□□□□ 0.57
SBF1-201ENST00000348911 TPM1P09493 284 aa18.58■□□□□ 0.57
SBF1-201ENST00000348911 GPS2Q13227 327 aa18.58■□□□□ 0.57
SBF1-201ENST00000348911 G3BP1Q13283 466 aaKnown RBP eCLIP18.58■□□□□ 0.57
SBF1-201ENST00000348911 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.576e-7■■■■■ 31.9
SBF1-201ENST00000348911 HSP90AB4PQ58FF6 505 aa18.58■□□□□ 0.57
SBF1-201ENST00000348911 CFAP70Q5T0N1 1121 aa18.58■□□□□ 0.57
SBF1-201ENST00000348911 ERC2O15083 957 aa18.58■□□□□ 0.56
SBF1-201ENST00000348911 CCDC173Q0VFZ6 552 aa18.58■□□□□ 0.56
SBF1-201ENST00000348911 LRRFIP1Q32MZ4 808 aaKnown RBP18.58■□□□□ 0.56
SBF1-201ENST00000348911 NOB1Q9ULX3 412 aaKnown RBP18.58■□□□□ 0.56
SBF1-201ENST00000348911 SCAPERQ9BY12 1400 aa18.57■□□□□ 0.56
SBF1-201ENST00000348911 TPM2P07951 284 aa18.57■□□□□ 0.56
SBF1-201ENST00000348911 HOMER1Q86YM7 354 aa18.57■□□□□ 0.56
SBF1-201ENST00000348911 RABEP1Q15276 862 aa18.57■□□□□ 0.56
SBF1-201ENST00000348911 GCC1Q96CN9 775 aa18.57■□□□□ 0.56
SBF1-201ENST00000348911 PRPF40AO75400 957 aaKnown RBP18.57■□□□□ 0.56
SBF1-201ENST00000348911 AKAP17AQ02040 695 aaKnown RBP18.57■□□□□ 0.56
SBF1-201ENST00000348911 CPLX2Q6PUV4 134 aaKnown RBP18.57■□□□□ 0.56
SBF1-201ENST00000348911 SYNE3Q6ZMZ3 975 aa18.56■□□□□ 0.56
SBF1-201ENST00000348911 C1orf115Q9H7X2 142 aa18.56■□□□□ 0.56
SBF1-201ENST00000348911 TRIM29Q14134 588 aa18.56■□□□□ 0.56
SBF1-201ENST00000348911 CPLX1O14810 134 aa18.56■□□□□ 0.56
SBF1-201ENST00000348911 MBD3O95983 291 aa18.55■□□□□ 0.56
SBF1-201ENST00000348911 TSR2Q969E8 191 aaKnown RBP18.55■□□□□ 0.56
SBF1-201ENST00000348911 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.55■□□□□ 0.56
SBF1-201ENST00000348911 ERBINQ96RT1 1412 aa18.55■□□□□ 0.56
SBF1-201ENST00000348911 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.55■□□□□ 0.565e-7■■■■■ 29.7
SBF1-201ENST00000348911 ARHGAP5Q13017 1502 aa18.55■□□□□ 0.56
SBF1-201ENST00000348911 DDX58O95786 925 aaKnown RBP18.54■□□□□ 0.56
SBF1-201ENST00000348911 FBXW7Q969H0 707 aa18.54■□□□□ 0.56
SBF1-201ENST00000348911 TSPY26PQ9H489 355 aa18.54■□□□□ 0.56
SBF1-201ENST00000348911 TTC5Q8N0Z6 440 aa18.54■□□□□ 0.56
SBF1-201ENST00000348911 MAP7D2Q96T17 732 aa18.54■□□□□ 0.56
SBF1-201ENST00000348911 C9orf84Q5VXU9 1444 aa18.53■□□□□ 0.56
SBF1-201ENST00000348911 NEK4P51957 841 aa18.53■□□□□ 0.56
SBF1-201ENST00000348911 MTERF4Q7Z6M4 381 aaKnown RBP18.53■□□□□ 0.56
SBF1-201ENST00000348911 LETM1O95202 739 aaPredicted RBP18.53■□□□□ 0.56
SBF1-201ENST00000348911 UBTFL1P0CB47 393 aaPredicted RBP18.53■□□□□ 0.56
SBF1-201ENST00000348911 CCDC73Q6ZRK6 1079 aa18.53■□□□□ 0.56
SBF1-201ENST00000348911 DAPK1P53355 1430 aa18.53■□□□□ 0.56
SBF1-201ENST00000348911 FOSBP53539 338 aa18.52■□□□□ 0.56
SBF1-201ENST00000348911 TEX35Q5T0J7 233 aa18.52■□□□□ 0.56
SBF1-201ENST00000348911 GRPEL1Q9HAV7 217 aa18.52■□□□□ 0.56
SBF1-201ENST00000348911 PRKAR2BP31323 418 aa18.52■□□□□ 0.55
SBF1-201ENST00000348911 MVPQ14764 893 aaKnown RBP18.52■□□□□ 0.55
SBF1-201ENST00000348911 WDR63Q8IWG1 891 aa18.52■□□□□ 0.55
SBF1-201ENST00000348911 SUPT6HQ7KZ85 1726 aaKnown RBP18.52■□□□□ 0.55
SBF1-201ENST00000348911 MCM2P49736 904 aa18.51■□□□□ 0.55
SBF1-201ENST00000348911 NAIPQ13075 1403 aa18.51■□□□□ 0.55
SBF1-201ENST00000348911 CNTROBQ8N137 903 aa18.51■□□□□ 0.55
SBF1-201ENST00000348911 CCDC27Q2M243 656 aa18.51■□□□□ 0.55
SBF1-201ENST00000348911 K7ELQ4 463 aaPredicted RBP18.5■□□□□ 0.55
SBF1-201ENST00000348911 TWISTNBQ3B726 338 aaPredicted RBP18.5■□□□□ 0.55
SBF1-201ENST00000348911 MARCH6O60337 910 aa18.5■□□□□ 0.55
SBF1-201ENST00000348911 CCDC70Q6NSX1 233 aa18.5■□□□□ 0.55
SBF1-201ENST00000348911 HOOK1Q9UJC3 728 aaKnown RBP18.5■□□□□ 0.55
SBF1-201ENST00000348911 HECW1Q76N89 1606 aa18.5■□□□□ 0.55
SBF1-201ENST00000348911 APPP05067 770 aa18.49■□□□□ 0.55
SBF1-201ENST00000348911 CT47B1P0C2W7 299 aaPredicted RBP18.49■□□□□ 0.55
SBF1-201ENST00000348911 SETQ01105 290 aaPredicted RBP18.48■□□□□ 0.55
SBF1-201ENST00000348911 PSMA5P28066 241 aa18.48■□□□□ 0.55
SBF1-201ENST00000348911 TRDNQ13061 729 aa18.48■□□□□ 0.55
SBF1-201ENST00000348911 CWC22Q9HCG8 908 aaKnown RBP18.48■□□□□ 0.55
SBF1-201ENST00000348911 GNAI3P08754 354 aa18.48■□□□□ 0.55
SBF1-201ENST00000348911 ATF7IPQ6VMQ6 1270 aa18.47■□□□□ 0.55
SBF1-201ENST00000348911 MCM4P33991 863 aa18.47■□□□□ 0.55
SBF1-201ENST00000348911 SLFN5Q08AF3 891 aa18.47■□□□□ 0.55
SBF1-201ENST00000348911 PDE4CQ08493 712 aa18.47■□□□□ 0.55
SBF1-201ENST00000348911 SLC12A5Q9H2X9 1139 aa18.47■□□□□ 0.55
SBF1-201ENST00000348911 ARGLU1Q9NWB6 273 aaPredicted RBP18.47■□□□□ 0.55
SBF1-201ENST00000348911 GRIN2BQ13224 1484 aa18.46■□□□□ 0.55
SBF1-201ENST00000348911 MNS1Q8NEH6 495 aa18.46■□□□□ 0.55
SBF1-201ENST00000348911 C11orf95C9JLR9 678 aaPredicted RBP18.46■□□□□ 0.55
SBF1-201ENST00000348911 ANKRD20A12PQ8NF67 263 aa18.46■□□□□ 0.55
SBF1-201ENST00000348911 BCL11BQ9C0K0 894 aaPredicted RBP18.46■□□□□ 0.55
SBF1-201ENST00000348911 NAT10Q9H0A0 1025 aaKnown RBP18.46■□□□□ 0.55
SBF1-201ENST00000348911 CHD1LQ86WJ1 897 aa18.46■□□□□ 0.55
SBF1-201ENST00000348911 GTF2E1P29083 439 aaPredicted RBP18.46■□□□□ 0.54
SBF1-201ENST00000348911 RBM10P98175 930 aaKnown RBP18.45■□□□□ 0.54
SBF1-201ENST00000348911 NFXL1Q6ZNB6 911 aa18.45■□□□□ 0.54
SBF1-201ENST00000348911 PRG4Q92954 1404 aaPredicted RBP18.45■□□□□ 0.54
SBF1-201ENST00000348911 SURF6O75683 361 aaKnown RBP18.45■□□□□ 0.54
SBF1-201ENST00000348911 IPO7O95373 1038 aaKnown RBP18.45■□□□□ 0.54
SBF1-201ENST00000348911 TRIM5Q9C035 493 aa18.45■□□□□ 0.54
SBF1-201ENST00000348911 CCDC30Q5VVM6 783 aa18.44■□□□□ 0.54
SBF1-201ENST00000348911 AFAP1Q8N556 730 aa18.44■□□□□ 0.54
SBF1-201ENST00000348911 PCMTD1Q96MG8 357 aaPredicted RBP18.44■□□□□ 0.54
SBF1-201ENST00000348911 TMX4Q9H1E5 349 aaPredicted RBP18.44■□□□□ 0.54
SBF1-201ENST00000348911 SYNJ2O15056 1496 aa18.44■□□□□ 0.54
SBF1-201ENST00000348911 FSD1Q9BTV5 496 aa18.43■□□□□ 0.54
SBF1-201ENST00000348911 VPS53Q5VIR6 699 aa18.42■□□□□ 0.54
SBF1-201ENST00000348911 RIC3Q7Z5B4 369 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms