RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 H0YHG0 523 aa13.44□□□□□ -0.26
SMARCE1-202ENST00000348513 ZNF592Q92610 1267 aa13.44□□□□□ -0.26
SMARCE1-202ENST00000348513 RBM28Q9NW13 759 aaKnown RBP13.44□□□□□ -0.26
SMARCE1-202ENST00000348513 TPM4P67936 248 aa13.44□□□□□ -0.26
SMARCE1-202ENST00000348513 TDO2P48775 406 aa13.43□□□□□ -0.26
SMARCE1-202ENST00000348513 RRP1P56182 461 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-202ENST00000348513 NEXNQ0ZGT2 675 aa13.43□□□□□ -0.26
SMARCE1-202ENST00000348513 PAIP2Q9BPZ3 127 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-202ENST00000348513 SF3A1Q15459 793 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-202ENST00000348513 GGNBP2Q9H3C7 697 aa13.43□□□□□ -0.26
SMARCE1-202ENST00000348513 FBXW7Q969H0 707 aa13.42□□□□□ -0.26
SMARCE1-202ENST00000348513 PDCL2Q8N4E4 241 aa13.42□□□□□ -0.26
SMARCE1-202ENST00000348513 C11orf95C9JLR9 678 aaPredicted RBP13.42□□□□□ -0.26
SMARCE1-202ENST00000348513 H3BQV1 296 aa13.42□□□□□ -0.26
SMARCE1-202ENST00000348513 IFFO2Q5TF58 517 aa13.42□□□□□ -0.26
SMARCE1-202ENST00000348513 ZNF622Q969S3 477 aaKnown RBP eCLIP13.42□□□□□ -0.268e-14■■■□□ 17.5
SMARCE1-202ENST00000348513 AEBP2Q6ZN18 517 aaPredicted RBP13.41□□□□□ -0.26
SMARCE1-202ENST00000348513 SASS6Q6UVJ0 657 aa13.41□□□□□ -0.26
SMARCE1-202ENST00000348513 CENPQQ7L2Z9 268 aaPredicted RBP13.41□□□□□ -0.26
SMARCE1-202ENST00000348513 MYOM3Q5VTT5 1437 aa13.41□□□□□ -0.26
SMARCE1-202ENST00000348513 FKBP5Q13451 457 aaPredicted RBP13.4□□□□□ -0.26
SMARCE1-202ENST00000348513 CHMP5Q9NZZ3 219 aa13.4□□□□□ -0.26
SMARCE1-202ENST00000348513 PPP4R3BQ5MIZ7 849 aa13.4□□□□□ -0.26
SMARCE1-202ENST00000348513 ACBD3Q9H3P7 528 aa13.4□□□□□ -0.26
SMARCE1-202ENST00000348513 ATF3P18847 181 aa13.4□□□□□ -0.27
SMARCE1-202ENST00000348513 PES1O00541 588 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-202ENST00000348513 FAM184AQ8NB25 1140 aa13.39□□□□□ -0.27
SMARCE1-202ENST00000348513 GRPEL1Q9HAV7 217 aa13.39□□□□□ -0.27
SMARCE1-202ENST00000348513 AIMP1Q12904 312 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-202ENST00000348513 AFAP1Q8N556 730 aa13.39□□□□□ -0.27
SMARCE1-202ENST00000348513 CCDC34Q96HJ3 373 aa13.39□□□□□ -0.27
SMARCE1-202ENST00000348513 TSPYL4Q9UJ04 414 aa13.39□□□□□ -0.27
SMARCE1-202ENST00000348513 CLCN1P35523 988 aa13.38□□□□□ -0.27
SMARCE1-202ENST00000348513 MCTP1Q6DN14 999 aa13.38□□□□□ -0.27
SMARCE1-202ENST00000348513 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMARCE1-202ENST00000348513 TPM3P06753 285 aa13.38□□□□□ -0.27
SMARCE1-202ENST00000348513 RBM25P49756 843 aaKnown RBP13.38□□□□□ -0.27
SMARCE1-202ENST00000348513 MNS1Q8NEH6 495 aa13.38□□□□□ -0.27
SMARCE1-202ENST00000348513 NLRP2Q9NX02 1062 aa13.38□□□□□ -0.27
SMARCE1-202ENST00000348513 FGD6Q6ZV73 1430 aa13.38□□□□□ -0.27
SMARCE1-202ENST00000348513 IFIT2P09913 472 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-202ENST00000348513 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.37□□□□□ -0.27
SMARCE1-202ENST00000348513 DYNC1I1O14576 645 aa13.37□□□□□ -0.27
SMARCE1-202ENST00000348513 PSMD1Q99460 953 aa13.37□□□□□ -0.27
SMARCE1-202ENST00000348513 VPS37DQ86XT2 251 aa13.37□□□□□ -0.27
SMARCE1-202ENST00000348513 CCDC191Q8NCU4 936 aa13.37□□□□□ -0.27
SMARCE1-202ENST00000348513 AKAP17AQ02040 695 aaKnown RBP13.36□□□□□ -0.27
SMARCE1-202ENST00000348513 NBPF1Q3BBV0 1214 aa13.36□□□□□ -0.27
SMARCE1-202ENST00000348513 CTR9Q6PD62 1173 aa13.36□□□□□ -0.27
SMARCE1-202ENST00000348513 TRAK2O60296 914 aa13.36□□□□□ -0.27
SMARCE1-202ENST00000348513 DZIP1LQ8IYY4 767 aaKnown RBP13.36□□□□□ -0.27
SMARCE1-202ENST00000348513 ZBED9Q6R2W3 1325 aa13.36□□□□□ -0.27
SMARCE1-202ENST00000348513 RAPGEF4Q8WZA2 1011 aa13.36□□□□□ -0.27
SMARCE1-202ENST00000348513 ANO2Q9NQ90 1003 aa13.36□□□□□ -0.27
SMARCE1-202ENST00000348513 ARHGAP5Q13017 1502 aa13.36□□□□□ -0.27
SMARCE1-202ENST00000348513 ZSCAN30Q86W11 494 aa13.36□□□□□ -0.27
SMARCE1-202ENST00000348513 RUNDC1Q96C34 613 aa13.35□□□□□ -0.27
SMARCE1-202ENST00000348513 TRIM34Q9BYJ4 488 aa13.35□□□□□ -0.27
SMARCE1-202ENST00000348513 PRM3Q9NNZ6 103 aa13.35□□□□□ -0.27
SMARCE1-202ENST00000348513 KIF7Q2M1P5 1343 aa13.35□□□□□ -0.27
SMARCE1-202ENST00000348513 KIF20AO95235 890 aa13.35□□□□□ -0.27
SMARCE1-202ENST00000348513 NOL10Q9BSC4 688 aaKnown RBP13.35□□□□□ -0.27
SMARCE1-202ENST00000348513 NLRP6P59044 892 aa13.34□□□□□ -0.27
SMARCE1-202ENST00000348513 DDX19BQ9UMR2 479 aa13.34□□□□□ -0.27
SMARCE1-202ENST00000348513 DDX58O95786 925 aaKnown RBP13.34□□□□□ -0.27
SMARCE1-202ENST00000348513 CCDC94Q9BW85 323 aaPredicted RBP13.34□□□□□ -0.27
SMARCE1-202ENST00000348513 HSP90B2PQ58FF3 399 aa13.34□□□□□ -0.27
SMARCE1-202ENST00000348513 FOSBP53539 338 aa13.34□□□□□ -0.27
SMARCE1-202ENST00000348513 SYNE3Q6ZMZ3 975 aa13.34□□□□□ -0.27
SMARCE1-202ENST00000348513 G3BP1Q13283 466 aaKnown RBP eCLIP13.33□□□□□ -0.28
SMARCE1-202ENST00000348513 ANKRD50Q9ULJ7 1429 aa13.33□□□□□ -0.28
SMARCE1-202ENST00000348513 TPD52L1Q16890 204 aaPredicted RBP13.33□□□□□ -0.28
SMARCE1-202ENST00000348513 SAMD1Q6SPF0 538 aaPredicted RBP13.33□□□□□ -0.28
SMARCE1-202ENST00000348513 BANK1Q8NDB2 785 aa13.33□□□□□ -0.28
SMARCE1-202ENST00000348513 CFAP70Q5T0N1 1121 aa13.33□□□□□ -0.28
SMARCE1-202ENST00000348513 DHX16O60231 1041 aaKnown RBP13.33□□□□□ -0.28
SMARCE1-202ENST00000348513 RIC3Q7Z5B4 369 aa13.33□□□□□ -0.28
SMARCE1-202ENST00000348513 CNPY4Q8N129 248 aa13.32□□□□□ -0.28
SMARCE1-202ENST00000348513 API5Q9BZZ5 524 aaKnown RBP13.32□□□□□ -0.28
SMARCE1-202ENST00000348513 FAM177BA6PVY3 158 aa13.32□□□□□ -0.28
SMARCE1-202ENST00000348513 TRERF1Q96PN7 1200 aa13.32□□□□□ -0.28
SMARCE1-202ENST00000348513 ESCO1Q5FWF5 840 aa13.32□□□□□ -0.28
SMARCE1-202ENST00000348513 CT47A1Q5JQC4 288 aaPredicted RBP13.32□□□□□ -0.28
SMARCE1-202ENST00000348513 ZNF428Q96B54 188 aa13.32□□□□□ -0.28
SMARCE1-202ENST00000348513 CUX1P39880 1505 aa13.32□□□□□ -0.28
SMARCE1-202ENST00000348513 SARNPP82979 210 aaKnown RBP13.31□□□□□ -0.28
SMARCE1-202ENST00000348513 AMOTL1Q8IY63 956 aa13.31□□□□□ -0.28
SMARCE1-202ENST00000348513 PANK1Q8TE04 598 aa13.31□□□□□ -0.28
SMARCE1-202ENST00000348513 CCDC7Q96M83 1385 aa13.31□□□□□ -0.28
SMARCE1-202ENST00000348513 FYB1O15117 783 aa13.31□□□□□ -0.28
SMARCE1-202ENST00000348513 CDR1P51861 262 aa13.31□□□□□ -0.28
SMARCE1-202ENST00000348513 DYDC1Q8WWB3 177 aa13.31□□□□□ -0.28
SMARCE1-202ENST00000348513 NEUROD6Q96NK8 337 aa13.31□□□□□ -0.28
SMARCE1-202ENST00000348513 CCAR2Q8N163 923 aaKnown RBP13.31□□□□□ -0.28
SMARCE1-202ENST00000348513 LNPKQ9C0E8 428 aa13.31□□□□□ -0.28
SMARCE1-202ENST00000348513 NCOA2Q15596 1464 aa13.3□□□□□ -0.28
SMARCE1-202ENST00000348513 ABTB2Q8N961 1025 aa13.3□□□□□ -0.28
SMARCE1-202ENST00000348513 IFT57Q9NWB7 429 aa13.3□□□□□ -0.28
SMARCE1-202ENST00000348513 RUFY2Q8WXA3 655 aa13.3□□□□□ -0.28
SMARCE1-202ENST00000348513 KIF21BO75037 1637 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms