RNA–Protein interactions for RNA: ENST00000348124.5

TRAF6-201, Transcript of TNF receptor associated factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF6, Length 2,558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6-201ENST00000348124 ESPNB1AK53 854 aa19.41■□□□□ 0.7
TRAF6-201ENST00000348124 RTEL1-TNFRSF6BF6WH68 1400 aa19.41■□□□□ 0.7
TRAF6-201ENST00000348124 DDX11L8A8MPP1 907 aa19.4■□□□□ 0.7
TRAF6-201ENST00000348124 ERBB4Q15303 1308 aa19.39■□□□□ 0.69
TRAF6-201ENST00000348124 HSCBQ8IWL3 235 aa19.39■□□□□ 0.69
TRAF6-201ENST00000348124 POLR3AO14802 1390 aaPredicted RBP19.38■□□□□ 0.69
TRAF6-201ENST00000348124 ARHGAP5Q13017 1502 aa19.38■□□□□ 0.69
TRAF6-201ENST00000348124 KDM5AP29375 1690 aaKnown RBP19.37■□□□□ 0.69
TRAF6-201ENST00000348124 TCP11L2Q8N4U5 519 aa19.37■□□□□ 0.69
TRAF6-201ENST00000348124 RUNDC1Q96C34 613 aa19.37■□□□□ 0.69
TRAF6-201ENST00000348124 ZNF692Q9BU19 519 aaPredicted RBP19.37■□□□□ 0.69
TRAF6-201ENST00000348124 ISY1Q9ULR0 285 aaKnown RBP19.37■□□□□ 0.69
TRAF6-201ENST00000348124 DUOX2Q9NRD8 1548 aa19.36■□□□□ 0.69
TRAF6-201ENST00000348124 MVPQ14764 893 aaKnown RBP19.36■□□□□ 0.69
TRAF6-201ENST00000348124 WDR63Q8IWG1 891 aa19.35■□□□□ 0.69
TRAF6-201ENST00000348124 TRIM44Q96DX7 344 aaPredicted RBP19.35■□□□□ 0.69
TRAF6-201ENST00000348124 TNNT2P45379 298 aaPredicted RBP19.33■□□□□ 0.69
TRAF6-201ENST00000348124 PHF23Q9BUL5 403 aaPredicted RBP19.33■□□□□ 0.69
TRAF6-201ENST00000348124 TTC37Q6PGP7 1564 aa19.33■□□□□ 0.68
TRAF6-201ENST00000348124 FTSJ3Q8IY81 847 aaKnown RBP19.33■□□□□ 0.68
TRAF6-201ENST00000348124 STAC3Q96MF2 364 aa19.33■□□□□ 0.68
TRAF6-201ENST00000348124 CEP152O94986 1710 aa19.32■□□□□ 0.68
TRAF6-201ENST00000348124 ERVK-7P63135 1459 aa19.32■□□□□ 0.68
TRAF6-201ENST00000348124 SPHKAPQ2M3C7 1700 aa19.32■□□□□ 0.68
TRAF6-201ENST00000348124 GAS2L3Q86XJ1 694 aa19.31■□□□□ 0.68
TRAF6-201ENST00000348124 UHRF1BP1LA0JNW5 1464 aa19.31■□□□□ 0.68
TRAF6-201ENST00000348124 DDIT3P35638 169 aa19.31■□□□□ 0.68
TRAF6-201ENST00000348124 ZKSCAN2Q63HK3 967 aa19.31■□□□□ 0.68
TRAF6-201ENST00000348124 MORC1Q86VD1 984 aa19.31■□□□□ 0.68
TRAF6-201ENST00000348124 DZIP1LQ8IYY4 767 aaKnown RBP19.31■□□□□ 0.68
TRAF6-201ENST00000348124 TNPO1Q92973 898 aaKnown RBP19.3■□□□□ 0.68
TRAF6-201ENST00000348124 IQSEC2Q5JU85 1478 aa19.3■□□□□ 0.68
TRAF6-201ENST00000348124 CYB5RLQ6IPT4 315 aa19.3■□□□□ 0.68
TRAF6-201ENST00000348124 NCOA3Q9Y6Q9 1424 aa19.29■□□□□ 0.68
TRAF6-201ENST00000348124 SLC24A1O60721 1099 aa19.29■□□□□ 0.68
TRAF6-201ENST00000348124 NPM1P06748 294 aaKnown RBP eCLIP19.28■□□□□ 0.68
TRAF6-201ENST00000348124 CFAP70Q5T0N1 1121 aa19.28■□□□□ 0.68
TRAF6-201ENST00000348124 ZCCHC11Q5TAX3 1644 aaKnown RBP19.27■□□□□ 0.68
TRAF6-201ENST00000348124 GBP4Q96PP9 640 aa19.27■□□□□ 0.68
TRAF6-201ENST00000348124 TRPM2O94759 1503 aa19.27■□□□□ 0.68
TRAF6-201ENST00000348124 SHPRHQ149N8 1683 aa19.27■□□□□ 0.67
TRAF6-201ENST00000348124 HDAC1Q13547 482 aaPredicted RBP19.27■□□□□ 0.67
TRAF6-201ENST00000348124 TPM2P07951 284 aa19.26■□□□□ 0.67
TRAF6-201ENST00000348124 CCDC27Q2M243 656 aa19.26■□□□□ 0.67
TRAF6-201ENST00000348124 SMC5Q8IY18 1101 aa19.26■□□□□ 0.67
TRAF6-201ENST00000348124 SNX21Q969T3 373 aa19.26■□□□□ 0.67
TRAF6-201ENST00000348124 KANK1Q14678 1352 aa19.26■□□□□ 0.67
TRAF6-201ENST00000348124 HSP90AB1P08238 724 aaKnown RBP19.25■□□□□ 0.67
TRAF6-201ENST00000348124 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.25■□□□□ 0.67
TRAF6-201ENST00000348124 RBM25P49756 843 aaKnown RBP19.25■□□□□ 0.67
TRAF6-201ENST00000348124 CIZ1Q9ULV3 898 aaPredicted RBP19.25■□□□□ 0.67
TRAF6-201ENST00000348124 SKOR2Q2VWA4 1001 aaPredicted RBP19.24■□□□□ 0.67
TRAF6-201ENST00000348124 NSD3Q9BZ95 1437 aa19.24■□□□□ 0.67
TRAF6-201ENST00000348124 CLTCL1P53675 1640 aa19.24■□□□□ 0.67
TRAF6-201ENST00000348124 ITPRIPQ8IWB1 547 aa19.24■□□□□ 0.67
TRAF6-201ENST00000348124 RAB3GAP1Q15042 981 aa19.23■□□□□ 0.67
TRAF6-201ENST00000348124 SMC4Q9NTJ3 1288 aa19.23■□□□□ 0.67
TRAF6-201ENST00000348124 PTPRTO14522 1441 aa19.23■□□□□ 0.67
TRAF6-201ENST00000348124 TRIM27P14373 513 aa19.22■□□□□ 0.67
TRAF6-201ENST00000348124 MTHFSP49914 203 aa19.22■□□□□ 0.67
TRAF6-201ENST00000348124 TSR2Q969E8 191 aaKnown RBP19.21■□□□□ 0.67
TRAF6-201ENST00000348124 DDX19BQ9UMR2 479 aa19.21■□□□□ 0.67
TRAF6-201ENST00000348124 PTMSP20962 102 aa19.2■□□□□ 0.66
TRAF6-201ENST00000348124 KIAA1211Q6ZU35 1233 aa19.2■□□□□ 0.66
TRAF6-201ENST00000348124 CFAP53Q96M91 514 aa19.2■□□□□ 0.66
TRAF6-201ENST00000348124 FOXD4L1Q9NU39 408 aa19.2■□□□□ 0.66
TRAF6-201ENST00000348124 KIAA1210Q9ULL0 1709 aa19.2■□□□□ 0.66
TRAF6-201ENST00000348124 ADGRF5Q8IZF2 1346 aa19.19■□□□□ 0.66
TRAF6-201ENST00000348124 CCDC173Q0VFZ6 552 aa19.19■□□□□ 0.66
TRAF6-201ENST00000348124 PDCL3Q9H2J4 239 aa19.18■□□□□ 0.66
TRAF6-201ENST00000348124 SLC12A5Q9H2X9 1139 aa19.18■□□□□ 0.66
TRAF6-201ENST00000348124 ASXL2Q76L83 1435 aa19.18■□□□□ 0.66
TRAF6-201ENST00000348124 EXOSC9Q06265 439 aaKnown RBP19.18■□□□□ 0.66
TRAF6-201ENST00000348124 CT47B1P0C2W7 299 aaPredicted RBP19.17■□□□□ 0.66
TRAF6-201ENST00000348124 U2AF1L5P0DN76 240 aaPredicted RBP19.17■□□□□ 0.66
TRAF6-201ENST00000348124 U2AF1Q01081 240 aaKnown RBP eCLIP19.17■□□□□ 0.66
TRAF6-201ENST00000348124 SSH1Q8WYL5 1049 aa19.17■□□□□ 0.66
TRAF6-201ENST00000348124 ZNF518AQ6AHZ1 1483 aa19.17■□□□□ 0.66
TRAF6-201ENST00000348124 NASPP49321 788 aaPredicted RBP19.17■□□□□ 0.66
TRAF6-201ENST00000348124 ATF7IPQ6VMQ6 1270 aa19.17■□□□□ 0.66
TRAF6-201ENST00000348124 LNPKQ9C0E8 428 aa19.17■□□□□ 0.66
TRAF6-201ENST00000348124 PPP1R9BQ96SB3 815 aa19.16■□□□□ 0.66
TRAF6-201ENST00000348124 NUCB1Q02818 461 aa19.16■□□□□ 0.66
TRAF6-201ENST00000348124 EFCAB2Q5VUJ9 269 aa19.16■□□□□ 0.66
TRAF6-201ENST00000348124 ZSCAN30Q86W11 494 aa19.16■□□□□ 0.66
TRAF6-201ENST00000348124 TMEM57Q8N5G2 664 aa19.15■□□□□ 0.66
TRAF6-201ENST00000348124 NOB1Q9ULX3 412 aaKnown RBP19.15■□□□□ 0.66
TRAF6-201ENST00000348124 CD2BP2O95400 341 aaKnown RBP19.15■□□□□ 0.66
TRAF6-201ENST00000348124 KIF2CQ99661 725 aa19.15■□□□□ 0.66
TRAF6-201ENST00000348124 ABCA6Q8N139 1617 aa19.15■□□□□ 0.66
TRAF6-201ENST00000348124 TRAPPC8Q9Y2L5 1435 aa19.14■□□□□ 0.66
TRAF6-201ENST00000348124 ZBTB40Q9NUA8 1239 aa19.14■□□□□ 0.65
TRAF6-201ENST00000348124 NCBP3Q53F19 620 aaKnown RBP19.14■□□□□ 0.65
TRAF6-201ENST00000348124 ANP32BQ92688 251 aaKnown RBP19.14■□□□□ 0.65
TRAF6-201ENST00000348124 SSFA2P28290 1259 aa19.13■□□□□ 0.65
TRAF6-201ENST00000348124 SBNO2Q9Y2G9 1366 aa19.13■□□□□ 0.65
TRAF6-201ENST00000348124 MAP3K4Q9Y6R4 1608 aa19.13■□□□□ 0.65
TRAF6-201ENST00000348124 PLCH2O75038 1416 aa19.13■□□□□ 0.65
TRAF6-201ENST00000348124 K7ELQ4 463 aaPredicted RBP19.12■□□□□ 0.65
TRAF6-201ENST00000348124 OFD1O75665 1012 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms