RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 FOXD4L5Q5VV16 416 aaPredicted RBP18.97■□□□□ 0.63
SRPK1-201ENST00000346162 FOXD4L4Q8WXT5 416 aaPredicted RBP18.97■□□□□ 0.63
SRPK1-201ENST00000346162 API5Q9BZZ5 524 aaKnown RBP18.97■□□□□ 0.63
SRPK1-201ENST00000346162 KIF16BQ96L93 1317 aa18.97■□□□□ 0.63
SRPK1-201ENST00000346162 CAMSAP2Q08AD1 1489 aa18.96■□□□□ 0.63
SRPK1-201ENST00000346162 ZNF330Q9Y3S2 320 aaPredicted RBP18.96■□□□□ 0.63
SRPK1-201ENST00000346162 NCOA1Q15788 1441 aa18.96■□□□□ 0.63
SRPK1-201ENST00000346162 SMG6Q86US8 1419 aaKnown RBP18.96■□□□□ 0.63
SRPK1-201ENST00000346162 ISY1Q9ULR0 285 aaKnown RBP18.96■□□□□ 0.63
SRPK1-201ENST00000346162 HTATSF1O43719 755 aaKnown RBP18.95■□□□□ 0.62
SRPK1-201ENST00000346162 AAMPQ13685 434 aa18.95■□□□□ 0.62
SRPK1-201ENST00000346162 NPHP1O15259 732 aa18.95■□□□□ 0.62
SRPK1-201ENST00000346162 ST18O60284 1047 aa18.95■□□□□ 0.62
SRPK1-201ENST00000346162 GNAI1P63096 354 aa18.94■□□□□ 0.62
SRPK1-201ENST00000346162 GPATCH3Q96I76 525 aa18.94■□□□□ 0.62
SRPK1-201ENST00000346162 GRIN2AQ12879 1464 aa18.94■□□□□ 0.62
SRPK1-201ENST00000346162 CCDC141Q6ZP82 1450 aa18.93■□□□□ 0.62
SRPK1-201ENST00000346162 HMGN5P82970 282 aaKnown RBP18.93■□□□□ 0.62
SRPK1-201ENST00000346162 GOLGA6L1Q8N7Z2 621 aa18.93■□□□□ 0.62
SRPK1-201ENST00000346162 NOL8Q76FK4 1167 aaKnown RBP18.93■□□□□ 0.62
SRPK1-201ENST00000346162 DIAPH3Q9NSV4 1193 aa18.92■□□□□ 0.62
SRPK1-201ENST00000346162 CCDC39Q9UFE4 941 aa18.92■□□□□ 0.62
SRPK1-201ENST00000346162 ZNF592Q92610 1267 aa18.91■□□□□ 0.62
SRPK1-201ENST00000346162 TEFQ10587 303 aa18.9■□□□□ 0.62
SRPK1-201ENST00000346162 LNPKQ9C0E8 428 aa18.9■□□□□ 0.62
SRPK1-201ENST00000346162 PRAM1Q96QH2 718 aa18.9■□□□□ 0.62
SRPK1-201ENST00000346162 CLCN1P35523 988 aa18.9■□□□□ 0.62
SRPK1-201ENST00000346162 CHMP3Q9Y3E7 222 aa18.9■□□□□ 0.62
SRPK1-201ENST00000346162 MCM4P33991 863 aa18.9■□□□□ 0.62
SRPK1-201ENST00000346162 RPRD2Q5VT52 1461 aaKnown RBP18.9■□□□□ 0.62
SRPK1-201ENST00000346162 ZSCAN30Q86W11 494 aa18.89■□□□□ 0.62
SRPK1-201ENST00000346162 TEX35Q5T0J7 233 aa18.89■□□□□ 0.61
SRPK1-201ENST00000346162 RILPL2Q969X0 211 aa18.89■□□□□ 0.61
SRPK1-201ENST00000346162 BCAR3O75815 825 aa18.89■□□□□ 0.61
SRPK1-201ENST00000346162 PDE3AQ14432 1141 aa18.89■□□□□ 0.61
SRPK1-201ENST00000346162 PTPRKQ15262 1439 aa18.88■□□□□ 0.61
SRPK1-201ENST00000346162 C22orf23Q9BZE7 217 aa18.88■□□□□ 0.61
SRPK1-201ENST00000346162 SLC52A1Q9NWF4 448 aa18.88■□□□□ 0.61
SRPK1-201ENST00000346162 TAF3Q5VWG9 929 aa18.87■□□□□ 0.61
SRPK1-201ENST00000346162 ZNF608Q9ULD9 1512 aaPredicted RBP18.87■□□□□ 0.61
SRPK1-201ENST00000346162 RAPGEF3O95398 923 aa18.87■□□□□ 0.61
SRPK1-201ENST00000346162 EXOSC9Q06265 439 aaKnown RBP18.86■□□□□ 0.61
SRPK1-201ENST00000346162 RNF214Q8ND24 703 aa18.86■□□□□ 0.61
SRPK1-201ENST00000346162 GORABQ5T7V8 394 aa18.86■□□□□ 0.61
SRPK1-201ENST00000346162 PRKAR2BP31323 418 aa18.85■□□□□ 0.61
SRPK1-201ENST00000346162 C1orf141Q5JVX7 400 aa18.85■□□□□ 0.61
SRPK1-201ENST00000346162 EIF2S2P20042 333 aaKnown RBP18.85■□□□□ 0.61
SRPK1-201ENST00000346162 FOXD4L6Q3SYB3 417 aaPredicted RBP18.85■□□□□ 0.61
SRPK1-201ENST00000346162 FOXD4L3Q6VB84 417 aaPredicted RBP18.85■□□□□ 0.61
SRPK1-201ENST00000346162 NECTIN2Q92692 538 aa18.85■□□□□ 0.61
SRPK1-201ENST00000346162 MCTP1Q6DN14 999 aa18.85■□□□□ 0.61
SRPK1-201ENST00000346162 MAPKBP1O60336 1514 aa18.85■□□□□ 0.61
SRPK1-201ENST00000346162 GPS2Q13227 327 aa18.85■□□□□ 0.61
SRPK1-201ENST00000346162 FKBP5Q13451 457 aaPredicted RBP18.84■□□□□ 0.61
SRPK1-201ENST00000346162 CBX1P83916 185 aa18.84■□□□□ 0.61
SRPK1-201ENST00000346162 TSPYL4Q9UJ04 414 aa18.83■□□□□ 0.6
SRPK1-201ENST00000346162 REC8O95072 547 aa18.83■□□□□ 0.6
SRPK1-201ENST00000346162 CAVIN1Q6NZI2 390 aaKnown RBP18.82■□□□□ 0.6
SRPK1-201ENST00000346162 TSR2Q969E8 191 aaKnown RBP18.82■□□□□ 0.6
SRPK1-201ENST00000346162 SETQ01105 290 aaPredicted RBP18.82■□□□□ 0.6
SRPK1-201ENST00000346162 CABP1Q9NZU7 370 aa18.82■□□□□ 0.6
SRPK1-201ENST00000346162 CGNQ9P2M7 1197 aaKnown RBP18.82■□□□□ 0.6
SRPK1-201ENST00000346162 RPGRIP1LQ68CZ1 1315 aa18.82■□□□□ 0.6
SRPK1-201ENST00000346162 TAF7LQ5H9L4 462 aa18.81■□□□□ 0.6
SRPK1-201ENST00000346162 THOC2Q8NI27 1593 aaKnown RBP18.8■□□□□ 0.6
SRPK1-201ENST00000346162 PSME1Q06323 249 aa18.8■□□□□ 0.6
SRPK1-201ENST00000346162 GNL2Q13823 731 aaKnown RBP18.8■□□□□ 0.6
SRPK1-201ENST00000346162 WDR63Q8IWG1 891 aa18.8■□□□□ 0.6
SRPK1-201ENST00000346162 BCL11BQ9C0K0 894 aaPredicted RBP18.8■□□□□ 0.6
SRPK1-201ENST00000346162 CDK19Q9BWU1 502 aa18.8■□□□□ 0.6
SRPK1-201ENST00000346162 PDZRN3Q9UPQ7 1066 aa18.79■□□□□ 0.6
SRPK1-201ENST00000346162 NUCB2P80303 420 aa18.79■□□□□ 0.6
SRPK1-201ENST00000346162 AEBP1Q8IUX7 1158 aa18.78■□□□□ 0.6
SRPK1-201ENST00000346162 C9orf78Q9NZ63 289 aaPredicted RBP18.78■□□□□ 0.6
SRPK1-201ENST00000346162 KIF14Q15058 1648 aa18.78■□□□□ 0.6
SRPK1-201ENST00000346162 NLRP6P59044 892 aa18.78■□□□□ 0.6
SRPK1-201ENST00000346162 TXNDC2Q86VQ3 553 aa18.78■□□□□ 0.6
SRPK1-201ENST00000346162 NOM1Q5C9Z4 860 aaKnown RBP18.78■□□□□ 0.6
SRPK1-201ENST00000346162 GPATCH8Q9UKJ3 1502 aaKnown RBP18.77■□□□□ 0.6
SRPK1-201ENST00000346162 HSP90B1P14625 803 aaKnown RBP18.77■□□□□ 0.6
SRPK1-201ENST00000346162 SLFN5Q08AF3 891 aa18.77■□□□□ 0.6
SRPK1-201ENST00000346162 IFT57Q9NWB7 429 aa18.76■□□□□ 0.59
SRPK1-201ENST00000346162 NEXNQ0ZGT2 675 aa18.75■□□□□ 0.59
SRPK1-201ENST00000346162 NUTM2GQ5VZR2 741 aa18.75■□□□□ 0.59
SRPK1-201ENST00000346162 TPM4P67936 248 aa18.75■□□□□ 0.59
SRPK1-201ENST00000346162 UGGT2Q9NYU1 1516 aa18.75■□□□□ 0.59
SRPK1-201ENST00000346162 WWC1Q8IX03 1113 aa18.74■□□□□ 0.59
SRPK1-201ENST00000346162 TWISTNBQ3B726 338 aaPredicted RBP18.74■□□□□ 0.59
SRPK1-201ENST00000346162 INTS3Q68E01 1043 aaKnown RBP18.74■□□□□ 0.59
SRPK1-201ENST00000346162 PDCL2Q8N4E4 241 aa18.74■□□□□ 0.59
SRPK1-201ENST00000346162 SKAP1Q86WV1 359 aa18.74■□□□□ 0.59
SRPK1-201ENST00000346162 RRAGDQ9NQL2 400 aaPredicted RBP18.74■□□□□ 0.59
SRPK1-201ENST00000346162 NOB1Q9ULX3 412 aaKnown RBP18.74■□□□□ 0.59
SRPK1-201ENST00000346162 XRCC6P12956 609 aaKnown RBP eCLIP18.73■□□□□ 0.59
SRPK1-201ENST00000346162 KIF3AQ9Y496 699 aa18.73■□□□□ 0.59
SRPK1-201ENST00000346162 NSD3Q9BZ95 1437 aa18.73■□□□□ 0.59
SRPK1-201ENST00000346162 MPNDQ8N594 471 aa18.73■□□□□ 0.59
SRPK1-201ENST00000346162 ANO2Q9NQ90 1003 aa18.73■□□□□ 0.59
SRPK1-201ENST00000346162 CT47B1P0C2W7 299 aaPredicted RBP18.73■□□□□ 0.59
SRPK1-201ENST00000346162 XPCQ01831 940 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms