RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 ZBED9Q6R2W3 1325 aa34.06■■■■□ 3.04
TRADD-201ENST00000345057 SIRT1Q96EB6 747 aa34.05■■■■□ 3.04
TRADD-201ENST00000345057 SAFB2Q14151 953 aaKnown RBP eCLIP34.05■■■■□ 3.04
TRADD-201ENST00000345057 BCANQ96GW7 911 aa34.04■■■■□ 3.04
TRADD-201ENST00000345057 RIMS1Q86UR5 1692 aaKnown RBP34.03■■■■□ 3.04
TRADD-201ENST00000345057 TECPR2O15040 1411 aa34.03■■■■□ 3.04
TRADD-201ENST00000345057 USP32Q8NFA0 1604 aa34.01■■■■□ 3.04
TRADD-201ENST00000345057 METP08581 1390 aa34.01■■■■□ 3.04
TRADD-201ENST00000345057 ANKRD36BQ8N2N9 1353 aa34.01■■■■□ 3.04
TRADD-201ENST00000345057 FAM135BQ49AJ0 1406 aa34.01■■■■□ 3.04
TRADD-201ENST00000345057 ADAMTSL3P82987 1691 aa34.01■■■■□ 3.03
TRADD-201ENST00000345057 SRPK2P78362 688 aaKnown RBP34.01■■■■□ 3.03
TRADD-201ENST00000345057 TXNDC2Q86VQ3 553 aa34.01■■■■□ 3.03
TRADD-201ENST00000345057 CARD14Q9BXL6 1004 aa34.01■■■■□ 3.03
TRADD-201ENST00000345057 SLC12A5Q9H2X9 1139 aa34■■■■□ 3.03
TRADD-201ENST00000345057 MINK1Q8N4C8 1332 aaPredicted RBP34■■■■□ 3.03
TRADD-201ENST00000345057 INSRP06213 1382 aa33.99■■■■□ 3.03
TRADD-201ENST00000345057 CABP2Q9NPB3 220 aa33.99■■■■□ 3.03
TRADD-201ENST00000345057 CPS1P31327 1500 aa33.98■■■■□ 3.03
TRADD-201ENST00000345057 ADAMTS13Q76LX8 1427 aa33.97■■■■□ 3.03
TRADD-201ENST00000345057 NSD3Q9BZ95 1437 aa33.97■■■■□ 3.03
TRADD-201ENST00000345057 PLPPR3Q6T4P5 718 aa33.97■■■■□ 3.03
TRADD-201ENST00000345057 LTKP29376 864 aa33.96■■■■□ 3.03
TRADD-201ENST00000345057 PPP2R1AP30153 589 aa33.96■■■■□ 3.03
TRADD-201ENST00000345057 CEP170BQ9Y4F5 1589 aaPredicted RBP33.95■■■■□ 3.03
TRADD-201ENST00000345057 CGNL1Q0VF96 1302 aa33.93■■■■□ 3.02
TRADD-201ENST00000345057 MED14O60244 1454 aa33.92■■■■□ 3.02
TRADD-201ENST00000345057 DIP2AQ14689 1571 aa33.92■■■■□ 3.02
TRADD-201ENST00000345057 NSD2O96028 1365 aa33.92■■■■□ 3.02
TRADD-201ENST00000345057 CDK19Q9BWU1 502 aa33.9■■■■□ 3.02
TRADD-201ENST00000345057 TERF2IPQ9NYB0 399 aa33.89■■■■□ 3.02
TRADD-201ENST00000345057 WAPLQ7Z5K2 1190 aa33.88■■■■□ 3.01
TRADD-201ENST00000345057 PLEKHH1Q9ULM0 1364 aa33.87■■■■□ 3.01
TRADD-201ENST00000345057 TBX22Q9Y458 520 aa33.86■■■■□ 3.01
TRADD-201ENST00000345057 ZNF142P52746 1687 aaPredicted RBP33.86■■■■□ 3.01
TRADD-201ENST00000345057 AEBP2Q6ZN18 517 aaPredicted RBP33.84■■■■□ 3.01
TRADD-201ENST00000345057 A0A1W2PP64 1363 aa33.82■■■■□ 3
TRADD-201ENST00000345057 HDGFL2Q7Z4V5 671 aaPredicted RBP33.82■■■■□ 3
TRADD-201ENST00000345057 MORC1Q86VD1 984 aa33.81■■■■□ 3
TRADD-201ENST00000345057 WASLO00401 505 aaPredicted RBP33.8■■■■□ 3
TRADD-201ENST00000345057 SETD1BQ9UPS6 1966 aaKnown RBP33.8■■■■□ 3
TRADD-201ENST00000345057 ATP7BP35670 1465 aa33.79■■■■□ 3
TRADD-201ENST00000345057 BLMP54132 1417 aaPredicted RBP33.78■■■■□ 3
TRADD-201ENST00000345057 WDR43Q15061 677 aaKnown RBP eCLIP33.78■■■■□ 3
TRADD-201ENST00000345057 ADGRB2O60241 1585 aa33.76■■■■□ 3
TRADD-201ENST00000345057 ROBO2Q9HCK4 1378 aa33.76■■■□□ 2.99
TRADD-201ENST00000345057 SLC26A8Q96RN1 970 aa33.75■■■□□ 2.99
TRADD-201ENST00000345057 CD163L1Q9NR16 1453 aa33.75■■■□□ 2.99
TRADD-201ENST00000345057 PIK3R4Q99570 1358 aa33.74■■■□□ 2.99
TRADD-201ENST00000345057 PTCH1Q13635 1447 aa33.74■■■□□ 2.99
TRADD-201ENST00000345057 NEFLP07196 543 aa33.73■■■□□ 2.99
TRADD-201ENST00000345057 POLR3AO14802 1390 aaPredicted RBP33.72■■■□□ 2.99
TRADD-201ENST00000345057 CABP1Q9NZU7 370 aa33.71■■■□□ 2.99
TRADD-201ENST00000345057 ANKLE2Q86XL3 938 aa33.71■■■□□ 2.99
TRADD-201ENST00000345057 PTPRUQ92729 1446 aa33.7■■■□□ 2.99
TRADD-201ENST00000345057 AMOTL2Q9Y2J4 779 aa33.68■■■□□ 2.98
TRADD-201ENST00000345057 SMG6Q86US8 1419 aaKnown RBP33.68■■■□□ 2.98
TRADD-201ENST00000345057 ANKRD26Q9UPS8 1709 aa33.66■■■□□ 2.98
TRADD-201ENST00000345057 PPIP5K1Q6PFW1 1433 aa33.65■■■□□ 2.98
TRADD-201ENST00000345057 ADAMTS8Q9UP79 889 aa33.65■■■□□ 2.98
TRADD-201ENST00000345057 CCDC61Q9Y6R9 512 aa33.65■■■□□ 2.98
TRADD-201ENST00000345057 NUDT16Q96DE0 195 aaKnown RBP33.64■■■□□ 2.98
TRADD-201ENST00000345057 PDE3BQ13370 1112 aa33.63■■■□□ 2.97
TRADD-201ENST00000345057 XRN1Q8IZH2 1706 aaKnown RBP33.63■■■□□ 2.97
TRADD-201ENST00000345057 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.62■■■□□ 2.97
TRADD-201ENST00000345057 CFAP53Q96M91 514 aa33.61■■■□□ 2.97
TRADD-201ENST00000345057 NUDCQ9Y266 331 aa33.61■■■□□ 2.97
TRADD-201ENST00000345057 CPSF1Q10570 1443 aaKnown RBP33.61■■■□□ 2.97
TRADD-201ENST00000345057 CDC42BPGQ6DT37 1551 aa33.6■■■□□ 2.97
TRADD-201ENST00000345057 SUPT16HQ9Y5B9 1047 aaKnown RBP33.6■■■□□ 2.97
TRADD-201ENST00000345057 KIF20BQ96Q89 1820 aa33.59■■■□□ 2.97
TRADD-201ENST00000345057 EDC4Q6P2E9 1401 aaKnown RBP33.58■■■□□ 2.97
TRADD-201ENST00000345057 FYB1O15117 783 aa33.58■■■□□ 2.97
TRADD-201ENST00000345057 ZNF692Q9BU19 519 aaPredicted RBP33.56■■■□□ 2.96
TRADD-201ENST00000345057 TNNT2P45379 298 aaPredicted RBP33.55■■■□□ 2.96
TRADD-201ENST00000345057 GGNBP2Q9H3C7 697 aa33.53■■■□□ 2.96
TRADD-201ENST00000345057 MTHFSP49914 203 aa33.52■■■□□ 2.96
TRADD-201ENST00000345057 ITSN1Q15811 1721 aa33.52■■■□□ 2.96
TRADD-201ENST00000345057 FKBP8Q14318 412 aa33.52■■■□□ 2.96
TRADD-201ENST00000345057 TOPAZ1Q8N9V7 1692 aa33.51■■■□□ 2.95
TRADD-201ENST00000345057 MON2Q7Z3U7 1717 aa33.51■■■□□ 2.95
TRADD-201ENST00000345057 NGEFQ8N5V2 710 aa33.5■■■□□ 2.95
TRADD-201ENST00000345057 AKAP12Q02952 1782 aa33.5■■■□□ 2.95
TRADD-201ENST00000345057 PRR36Q9H6K5 1346 aa33.48■■■□□ 2.95
TRADD-201ENST00000345057 SHPRHQ149N8 1683 aa33.47■■■□□ 2.95
TRADD-201ENST00000345057 CHD2O14647 1828 aaKnown RBP33.46■■■□□ 2.95
TRADD-201ENST00000345057 NPHP4O75161 1426 aaPredicted RBP33.46■■■□□ 2.95
TRADD-201ENST00000345057 PLEKHG3A1L390 1219 aa33.46■■■□□ 2.95
TRADD-201ENST00000345057 KCNA6P17658 529 aa33.45■■■□□ 2.95
TRADD-201ENST00000345057 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.43■■■□□ 2.94
TRADD-201ENST00000345057 SALL2Q9Y467 1007 aaPredicted RBP33.42■■■□□ 2.94
TRADD-201ENST00000345057 ERICH6BQ5W0A0 696 aa33.41■■■□□ 2.94
TRADD-201ENST00000345057 ANKARQ7Z5J8 1434 aa33.41■■■□□ 2.94
TRADD-201ENST00000345057 SENP3-EIF4A1A0A087X0R7 540 aa33.4■■■□□ 2.94
TRADD-201ENST00000345057 NCKAP5LQ9HCH0 1330 aa33.37■■■□□ 2.93
TRADD-201ENST00000345057 ACEP12821 1306 aa33.36■■■□□ 2.93
TRADD-201ENST00000345057 COG3Q96JB2 828 aa33.34■■■□□ 2.93
TRADD-201ENST00000345057 NRKQ7Z2Y5 1582 aa33.34■■■□□ 2.93
TRADD-201ENST00000345057 CCDC146Q8IYE0 955 aa33.33■■■□□ 2.93
TRADD-201ENST00000345057 LMTK3Q96Q04 1460 aa33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms