RNA–Protein interactions for RNA: ENST00000345016.9

AP3D1-201, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AP3D1, Length 4,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-201ENST00000345016 SDF4Q9BRK5 362 aa20.16■□□□□ 0.82
AP3D1-201ENST00000345016 EID1Q9Y6B2 187 aa20.16■□□□□ 0.82
AP3D1-201ENST00000345016 CCDC27Q2M243 656 aa20.15■□□□□ 0.82
AP3D1-201ENST00000345016 MPNDQ8N594 471 aa20.15■□□□□ 0.82
AP3D1-201ENST00000345016 ESPNB1AK53 854 aa20.15■□□□□ 0.82
AP3D1-201ENST00000345016 PPP2R1AP30153 589 aa20.15■□□□□ 0.82
AP3D1-201ENST00000345016 C1orf141Q5JVX7 400 aa20.15■□□□□ 0.82
AP3D1-201ENST00000345016 SMARCA4P51532 1647 aa20.15■□□□□ 0.82
AP3D1-201ENST00000345016 APPP05067 770 aa20.15■□□□□ 0.82
AP3D1-201ENST00000345016 RABEP1Q15276 862 aa20.14■□□□□ 0.82
AP3D1-201ENST00000345016 MYOM3Q5VTT5 1437 aa20.14■□□□□ 0.82
AP3D1-201ENST00000345016 PATL2C9JE40 543 aaKnown RBP20.14■□□□□ 0.81
AP3D1-201ENST00000345016 TSPY26PQ9H489 355 aa20.14■□□□□ 0.81
AP3D1-201ENST00000345016 GTF2E1P29083 439 aaPredicted RBP20.14■□□□□ 0.81
AP3D1-201ENST00000345016 HSP90B2PQ58FF3 399 aa20.14■□□□□ 0.81
AP3D1-201ENST00000345016 EXOSC9Q06265 439 aaKnown RBP20.13■□□□□ 0.81
AP3D1-201ENST00000345016 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.13■□□□□ 0.81
AP3D1-201ENST00000345016 MIA2Q96PC5 1412 aa20.13■□□□□ 0.81
AP3D1-201ENST00000345016 ERC2O15083 957 aa20.13■□□□□ 0.81
AP3D1-201ENST00000345016 MCM4P33991 863 aa20.13■□□□□ 0.81
AP3D1-201ENST00000345016 HOOK1Q9UJC3 728 aaKnown RBP20.13■□□□□ 0.81
AP3D1-201ENST00000345016 TRDNQ13061 729 aa20.13■□□□□ 0.81
AP3D1-201ENST00000345016 VPS53Q5VIR6 699 aa20.13■□□□□ 0.81
AP3D1-201ENST00000345016 HSP90AB4PQ58FF6 505 aa20.13■□□□□ 0.81
AP3D1-201ENST00000345016 TSPYL4Q9UJ04 414 aa20.13■□□□□ 0.81
AP3D1-201ENST00000345016 FIBPO43427 364 aa20.12■□□□□ 0.81
AP3D1-201ENST00000345016 NBPF8Q3BBV2 869 aa20.1■□□□□ 0.81
AP3D1-201ENST00000345016 C1orf115Q9H7X2 142 aa20.1■□□□□ 0.81
AP3D1-201ENST00000345016 MCM2P49736 904 aa20.09■□□□□ 0.81
AP3D1-201ENST00000345016 KIF21BO75037 1637 aa20.09■□□□□ 0.81
AP3D1-201ENST00000345016 NAT10Q9H0A0 1025 aaKnown RBP20.09■□□□□ 0.81
AP3D1-201ENST00000345016 SMG6Q86US8 1419 aaKnown RBP20.08■□□□□ 0.81
AP3D1-201ENST00000345016 SPC24Q8NBT2 197 aa20.08■□□□□ 0.81
AP3D1-201ENST00000345016 IGF1RP08069 1367 aa20.08■□□□□ 0.81
AP3D1-201ENST00000345016 LETM1O95202 739 aaPredicted RBP20.08■□□□□ 0.8
AP3D1-201ENST00000345016 ACBD3Q9H3P7 528 aa20.08■□□□□ 0.8
AP3D1-201ENST00000345016 DDX58O95786 925 aaKnown RBP20.08■□□□□ 0.8
AP3D1-201ENST00000345016 FMNL2Q96PY5 1086 aa20.08■□□□□ 0.8
AP3D1-201ENST00000345016 LRRC9Q6ZRR7 1453 aa20.07■□□□□ 0.8
AP3D1-201ENST00000345016 UBTFL1P0CB47 393 aaPredicted RBP20.07■□□□□ 0.8
AP3D1-201ENST00000345016 CCDC66A2RUB6 948 aa20.07■□□□□ 0.8
AP3D1-201ENST00000345016 PDILTQ8N807 584 aa20.07■□□□□ 0.8
AP3D1-201ENST00000345016 NFXL1Q6ZNB6 911 aa20.06■□□□□ 0.8
AP3D1-201ENST00000345016 NOM1Q5C9Z4 860 aaKnown RBP20.06■□□□□ 0.8
AP3D1-201ENST00000345016 TSR2Q969E8 191 aaKnown RBP20.06■□□□□ 0.8
AP3D1-201ENST00000345016 CCDC47Q96A33 483 aaKnown RBP20.06■□□□□ 0.8
AP3D1-201ENST00000345016 RUFY1Q96T51 708 aa20.06■□□□□ 0.8
AP3D1-201ENST00000345016 K7ELQ4 463 aaPredicted RBP20.05■□□□□ 0.8
AP3D1-201ENST00000345016 NBPF1Q3BBV0 1214 aa20.05■□□□□ 0.8
AP3D1-201ENST00000345016 STAC3Q96MF2 364 aa20.05■□□□□ 0.8
AP3D1-201ENST00000345016 RRP9O43818 475 aaKnown RBP20.05■□□□□ 0.8
AP3D1-201ENST00000345016 SURF6O75683 361 aaKnown RBP20.05■□□□□ 0.8
AP3D1-201ENST00000345016 TRHP20396 242 aaPredicted RBP20.05■□□□□ 0.8
AP3D1-201ENST00000345016 GCC1Q96CN9 775 aa20.05■□□□□ 0.8
AP3D1-201ENST00000345016 TTC5Q8N0Z6 440 aa20.05■□□□□ 0.8
AP3D1-201ENST00000345016 PRKCSHP14314 528 aaPredicted RBP20.05■□□□□ 0.8
AP3D1-201ENST00000345016 KINO60870 393 aaKnown RBP20.04■□□□□ 0.8
AP3D1-201ENST00000345016 ANKRD50Q9ULJ7 1429 aa20.04■□□□□ 0.8
AP3D1-201ENST00000345016 PDCP20941 246 aa20.04■□□□□ 0.8
AP3D1-201ENST00000345016 SAFBQ15424 915 aaKnown RBP eCLIP20.04■□□□□ 0.8
AP3D1-201ENST00000345016 RALYLQ86SE5 291 aaKnown RBP20.04■□□□□ 0.8
AP3D1-201ENST00000345016 CLASRPQ8N2M8 674 aaKnown RBP20.04■□□□□ 0.8
AP3D1-201ENST00000345016 CABP2Q9NPB3 220 aa20.03■□□□□ 0.8
AP3D1-201ENST00000345016 TMEM132EQ6IEE7 984 aa20.03■□□□□ 0.8
AP3D1-201ENST00000345016 PSMA5P28066 241 aa20.03■□□□□ 0.8
AP3D1-201ENST00000345016 CWC22Q9HCG8 908 aaKnown RBP20.03■□□□□ 0.8
AP3D1-201ENST00000345016 NOB1Q9ULX3 412 aaKnown RBP20.03■□□□□ 0.8
AP3D1-201ENST00000345016 UQCRHLA0A096LP55 91 aa20.02■□□□□ 0.8
AP3D1-201ENST00000345016 UQCRHP07919 91 aa20.02■□□□□ 0.8
AP3D1-201ENST00000345016 CNTROBQ8N137 903 aa20.02■□□□□ 0.8
AP3D1-201ENST00000345016 TMX4Q9H1E5 349 aaPredicted RBP20.02■□□□□ 0.8
AP3D1-201ENST00000345016 GNAI3P08754 354 aa20.02■□□□□ 0.8
AP3D1-201ENST00000345016 OLFM4Q6UX06 510 aa20.02■□□□□ 0.8
AP3D1-201ENST00000345016 AK7Q96M32 723 aa20.02■□□□□ 0.8
AP3D1-201ENST00000345016 NEUROD6Q96NK8 337 aa20.02■□□□□ 0.8
AP3D1-201ENST00000345016 SMC2O95347 1197 aa20.01■□□□□ 0.79
AP3D1-201ENST00000345016 WWC1Q8IX03 1113 aa20.01■□□□□ 0.79
AP3D1-201ENST00000345016 SKAP1Q86WV1 359 aa20.01■□□□□ 0.79
AP3D1-201ENST00000345016 RRBP1Q9P2E9 1410 aaKnown RBP20■□□□□ 0.79
AP3D1-201ENST00000345016 PRKAR2BP31323 418 aa20■□□□□ 0.79
AP3D1-201ENST00000345016 CFAP70Q5T0N1 1121 aa20■□□□□ 0.79
AP3D1-201ENST00000345016 FSD1Q9BTV5 496 aa20■□□□□ 0.79
AP3D1-201ENST00000345016 CIZ1Q9ULV3 898 aaPredicted RBP20■□□□□ 0.79
AP3D1-201ENST00000345016 TTLL5Q6EMB2 1281 aa20■□□□□ 0.79
AP3D1-201ENST00000345016 NAP1L1P55209 391 aaKnown RBP20■□□□□ 0.79
AP3D1-201ENST00000345016 G3V3G9 751 aa19.99■□□□□ 0.79
AP3D1-201ENST00000345016 TWISTNBQ3B726 338 aaPredicted RBP19.99■□□□□ 0.79
AP3D1-201ENST00000345016 DCAF8Q5TAQ9 597 aa19.99■□□□□ 0.79
AP3D1-201ENST00000345016 CWC15Q9P013 229 aaKnown RBP19.99■□□□□ 0.79
AP3D1-201ENST00000345016 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
AP3D1-201ENST00000345016 WASHC4Q2M389 1173 aa19.98■□□□□ 0.79
AP3D1-201ENST00000345016 PTPRGP23470 1445 aa19.98■□□□□ 0.79
AP3D1-201ENST00000345016 CCDC192P0DO97 292 aa19.98■□□□□ 0.79
AP3D1-201ENST00000345016 ATF7IPQ6VMQ6 1270 aa19.98■□□□□ 0.79
AP3D1-201ENST00000345016 CCDC112Q8NEF3 446 aa19.98■□□□□ 0.79
AP3D1-201ENST00000345016 AIMP1Q12904 312 aaKnown RBP19.98■□□□□ 0.79
AP3D1-201ENST00000345016 NINLQ9Y2I6 1382 aa19.98■□□□□ 0.79
AP3D1-201ENST00000345016 CEBPZQ03701 1054 aaKnown RBP19.98■□□□□ 0.79
AP3D1-201ENST00000345016 MVPQ14764 893 aaKnown RBP19.98■□□□□ 0.79
AP3D1-201ENST00000345016 ZSCAN30Q86W11 494 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms