RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 NLRP13Q86W25 1043 aa18.43■□□□□ 0.54
CDC42-202ENST00000344548 ABCC11Q96J66 1382 aa18.42■□□□□ 0.54
CDC42-202ENST00000344548 SLC26A8Q96RN1 970 aa18.42■□□□□ 0.54
CDC42-202ENST00000344548 HDGFP51858 240 aaKnown RBP18.41■□□□□ 0.54
CDC42-202ENST00000344548 SRPK2P78362 688 aaKnown RBP18.4■□□□□ 0.54
CDC42-202ENST00000344548 ADAMTSL3P82987 1691 aa18.4■□□□□ 0.54
CDC42-202ENST00000344548 ARHGAP23Q9P227 1491 aa18.39■□□□□ 0.54
CDC42-202ENST00000344548 PPP2R1AP30153 589 aa18.39■□□□□ 0.54
CDC42-202ENST00000344548 DLC1Q96QB1 1528 aa18.39■□□□□ 0.53
CDC42-202ENST00000344548 PLEKHG1Q9ULL1 1385 aa18.39■□□□□ 0.53
CDC42-202ENST00000344548 NSD3Q9BZ95 1437 aa18.38■□□□□ 0.53
CDC42-202ENST00000344548 CDK19Q9BWU1 502 aa18.38■□□□□ 0.53
CDC42-202ENST00000344548 SLIT1O75093 1534 aa18.38■□□□□ 0.53
CDC42-202ENST00000344548 PUS7Q96PZ0 661 aaKnown RBP18.37■□□□□ 0.53
CDC42-202ENST00000344548 THEMISQ8N1K5 641 aaPredicted RBP18.37■□□□□ 0.53
CDC42-202ENST00000344548 NPC1L1Q9UHC9 1359 aa18.37■□□□□ 0.53
CDC42-202ENST00000344548 MED14O60244 1454 aa18.36■□□□□ 0.53
CDC42-202ENST00000344548 ROBO2Q9HCK4 1378 aa18.35■□□□□ 0.53
CDC42-202ENST00000344548 EID1Q9Y6B2 187 aa18.35■□□□□ 0.53
CDC42-202ENST00000344548 PTPRUQ92729 1446 aa18.35■□□□□ 0.53
CDC42-202ENST00000344548 CEP170BQ9Y4F5 1589 aaPredicted RBP18.34■□□□□ 0.53
CDC42-202ENST00000344548 TECPR2O15040 1411 aa18.33■□□□□ 0.53
CDC42-202ENST00000344548 CD163L1Q9NR16 1453 aa18.33■□□□□ 0.53
CDC42-202ENST00000344548 A0A1W2PP64 1363 aa18.33■□□□□ 0.52
CDC42-202ENST00000344548 ANKRD36BQ8N2N9 1353 aa18.33■□□□□ 0.52
CDC42-202ENST00000344548 CABP1Q9NZU7 370 aa18.32■□□□□ 0.52
CDC42-202ENST00000344548 ZBED9Q6R2W3 1325 aa18.32■□□□□ 0.52
CDC42-202ENST00000344548 NCKAP5LQ9HCH0 1330 aa18.31■□□□□ 0.52
CDC42-202ENST00000344548 KNDC1Q76NI1 1749 aa18.31■□□□□ 0.52
CDC42-202ENST00000344548 TNNT2P45379 298 aaPredicted RBP18.3■□□□□ 0.52
CDC42-202ENST00000344548 CPS1P31327 1500 aa18.3■□□□□ 0.52
CDC42-202ENST00000344548 FAM135BQ49AJ0 1406 aa18.29■□□□□ 0.52
CDC42-202ENST00000344548 ATAD2Q6PL18 1390 aa18.29■□□□□ 0.52
CDC42-202ENST00000344548 WASLO00401 505 aaPredicted RBP18.29■□□□□ 0.52
CDC42-202ENST00000344548 SIRT1Q96EB6 747 aa18.28■□□□□ 0.52
CDC42-202ENST00000344548 TBX22Q9Y458 520 aa18.28■□□□□ 0.52
CDC42-202ENST00000344548 ADAMTS8Q9UP79 889 aa18.27■□□□□ 0.52
CDC42-202ENST00000344548 AMOTL2Q9Y2J4 779 aa18.27■□□□□ 0.52
CDC42-202ENST00000344548 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.27■□□□□ 0.51
CDC42-202ENST00000344548 MORC1Q86VD1 984 aa18.25■□□□□ 0.51
CDC42-202ENST00000344548 SALL2Q9Y467 1007 aaPredicted RBP18.25■□□□□ 0.51
CDC42-202ENST00000344548 CGNL1Q0VF96 1302 aa18.25■□□□□ 0.51
CDC42-202ENST00000344548 USP32Q8NFA0 1604 aa18.24■□□□□ 0.51
CDC42-202ENST00000344548 PRR36Q9H6K5 1346 aa18.24■□□□□ 0.51
CDC42-202ENST00000344548 NINLQ9Y2I6 1382 aa18.24■□□□□ 0.51
CDC42-202ENST00000344548 GGNBP2Q9H3C7 697 aa18.24■□□□□ 0.51
CDC42-202ENST00000344548 NUTM2FA1L443 756 aa18.23■□□□□ 0.51
CDC42-202ENST00000344548 SETD1BQ9UPS6 1966 aaKnown RBP18.23■□□□□ 0.51
CDC42-202ENST00000344548 FYB1O15117 783 aa18.23■□□□□ 0.51
CDC42-202ENST00000344548 NUDT16Q96DE0 195 aaKnown RBP18.23■□□□□ 0.51
CDC42-202ENST00000344548 ZNF142P52746 1687 aaPredicted RBP18.22■□□□□ 0.51
CDC42-202ENST00000344548 TERF2IPQ9NYB0 399 aa18.22■□□□□ 0.51
CDC42-202ENST00000344548 KCNA6P17658 529 aa18.2■□□□□ 0.5
CDC42-202ENST00000344548 SUPT16HQ9Y5B9 1047 aaKnown RBP18.2■□□□□ 0.5
CDC42-202ENST00000344548 BLMP54132 1417 aaPredicted RBP18.2■□□□□ 0.5
CDC42-202ENST00000344548 PPIP5K1Q6PFW1 1433 aa18.2■□□□□ 0.5
CDC42-202ENST00000344548 ANKLE2Q86XL3 938 aa18.2■□□□□ 0.5
CDC42-202ENST00000344548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.19■□□□□ 0.5
CDC42-202ENST00000344548 ATP7BP35670 1465 aa18.19■□□□□ 0.5
CDC42-202ENST00000344548 MTHFSP49914 203 aa18.18■□□□□ 0.5
CDC42-202ENST00000344548 HDGFL2Q7Z4V5 671 aaPredicted RBP18.18■□□□□ 0.5
CDC42-202ENST00000344548 FBLN1P23142 703 aa18.18■□□□□ 0.5
CDC42-202ENST00000344548 CCDC61Q9Y6R9 512 aa18.18■□□□□ 0.5
CDC42-202ENST00000344548 CPSF1Q10570 1443 aaKnown RBP18.17■□□□□ 0.5
CDC42-202ENST00000344548 RBM33Q96EV2 1170 aaKnown RBP18.17■□□□□ 0.5
CDC42-202ENST00000344548 DIP2AQ14689 1571 aa18.17■□□□□ 0.5
CDC42-202ENST00000344548 WDR43Q15061 677 aaKnown RBP eCLIP18.16■□□□□ 0.5
CDC42-202ENST00000344548 XRN1Q8IZH2 1706 aaKnown RBP18.16■□□□□ 0.5
CDC42-202ENST00000344548 FKBP8Q14318 412 aa18.15■□□□□ 0.5
CDC42-202ENST00000344548 CCDC146Q8IYE0 955 aa18.15■□□□□ 0.5
CDC42-202ENST00000344548 ZRANB1Q9UGI0 708 aa18.15■□□□□ 0.5
CDC42-202ENST00000344548 POLR3AO14802 1390 aaPredicted RBP18.15■□□□□ 0.5
CDC42-202ENST00000344548 NSD2O96028 1365 aa18.15■□□□□ 0.5
CDC42-202ENST00000344548 PTCH1Q13635 1447 aa18.15■□□□□ 0.5
CDC42-202ENST00000344548 ADGRB2O60241 1585 aa18.15■□□□□ 0.5
CDC42-202ENST00000344548 CDCA7LQ96GN5 454 aa18.13■□□□□ 0.49
CDC42-202ENST00000344548 INSRP06213 1382 aa18.13■□□□□ 0.49
CDC42-202ENST00000344548 IRX6P78412 446 aaPredicted RBP18.12■□□□□ 0.49
CDC42-202ENST00000344548 NME9Q86XW9 330 aa18.12■□□□□ 0.49
CDC42-202ENST00000344548 SHPRHQ149N8 1683 aa18.12■□□□□ 0.49
CDC42-202ENST00000344548 SMG6Q86US8 1419 aaKnown RBP18.12■□□□□ 0.49
CDC42-202ENST00000344548 NKTRP30414 1462 aaKnown RBP18.11■□□□□ 0.49
CDC42-202ENST00000344548 CDC42BPGQ6DT37 1551 aa18.11■□□□□ 0.49
CDC42-202ENST00000344548 NUDCQ9Y266 331 aa18.11■□□□□ 0.49
CDC42-202ENST00000344548 PIK3R4Q99570 1358 aa18.1■□□□□ 0.49
CDC42-202ENST00000344548 ANKRD26Q9UPS8 1709 aa18.09■□□□□ 0.49
CDC42-202ENST00000344548 CHD2O14647 1828 aaKnown RBP18.09■□□□□ 0.49
CDC42-202ENST00000344548 KIF20BQ96Q89 1820 aa18.09■□□□□ 0.49
CDC42-202ENST00000344548 ACEP12821 1306 aa18.09■□□□□ 0.49
CDC42-202ENST00000344548 NPHP4O75161 1426 aaPredicted RBP18.09■□□□□ 0.49
CDC42-202ENST00000344548 PMFBP1Q8TBY8 1022 aa18.09■□□□□ 0.49
CDC42-202ENST00000344548 RGPD8O14715 1765 aaPredicted RBP18.08■□□□□ 0.49
CDC42-202ENST00000344548 EDC4Q6P2E9 1401 aaKnown RBP18.08■□□□□ 0.49
CDC42-202ENST00000344548 TOPAZ1Q8N9V7 1692 aa18.08■□□□□ 0.48
CDC42-202ENST00000344548 MON2Q7Z3U7 1717 aa18.07■□□□□ 0.48
CDC42-202ENST00000344548 AKAP12Q02952 1782 aa18.07■□□□□ 0.48
CDC42-202ENST00000344548 APAF1O14727 1248 aa18.07■□□□□ 0.48
CDC42-202ENST00000344548 PLEKHG3A1L390 1219 aa18.06■□□□□ 0.48
CDC42-202ENST00000344548 KDM4FA0A1W2PPD8 638 aa18.06■□□□□ 0.48
CDC42-202ENST00000344548 HSPA2P54652 639 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms