RNA–Protein interactions for RNA: ENST00000343067.8

EPB41-201, Transcript of erythrocyte membrane protein band 4.1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EPB41, Length 5,956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-201ENST00000343067 TICAM2Q86XR7 235 aa9.76□□□□□ -0.85
EPB41-201ENST00000343067 ZNF777Q9ULD5 760 aaPredicted RBP9.76□□□□□ -0.85
EPB41-201ENST00000343067 RALBP1Q15311 655 aa9.76□□□□□ -0.85
EPB41-201ENST00000343067 CHMP7Q8WUX9 453 aaPredicted RBP9.76□□□□□ -0.85
EPB41-201ENST00000343067 NUDCQ9Y266 331 aa9.76□□□□□ -0.85
EPB41-201ENST00000343067 TDO2P48775 406 aa9.75□□□□□ -0.85
EPB41-201ENST00000343067 FTSJ3Q8IY81 847 aaKnown RBP9.75□□□□□ -0.85
EPB41-201ENST00000343067 CGNQ9P2M7 1197 aaKnown RBP9.75□□□□□ -0.85
EPB41-201ENST00000343067 SAMD9LQ8IVG5 1584 aa9.75□□□□□ -0.85
EPB41-201ENST00000343067 CCP110O43303 1012 aa9.75□□□□□ -0.85
EPB41-201ENST00000343067 CDC42BPBQ9Y5S2 1711 aa9.75□□□□□ -0.85
EPB41-201ENST00000343067 CWC15Q9P013 229 aaKnown RBP9.75□□□□□ -0.85
EPB41-201ENST00000343067 NRDCO43847 1150 aa9.74□□□□□ -0.85
EPB41-201ENST00000343067 KIF15Q9NS87 1388 aa9.74□□□□□ -0.85
EPB41-201ENST00000343067 TEX35Q5T0J7 233 aa9.74□□□□□ -0.85
EPB41-201ENST00000343067 CEP89Q96ST8 783 aa9.74□□□□□ -0.85
EPB41-201ENST00000343067 PLA2R1Q13018 1463 aa9.74□□□□□ -0.85
EPB41-201ENST00000343067 GOLGA6L10A0A0M3HER8 536 aa9.74□□□□□ -0.85
EPB41-201ENST00000343067 GOLGA6L10A6NI86 522 aa9.74□□□□□ -0.85
EPB41-201ENST00000343067 GOLIM4O00461 696 aa9.74□□□□□ -0.85
EPB41-201ENST00000343067 CCDC191Q8NCU4 936 aa9.74□□□□□ -0.85
EPB41-201ENST00000343067 TRPM1Q7Z4N2 1603 aa9.74□□□□□ -0.85
EPB41-201ENST00000343067 BECN1Q14457 450 aa9.73□□□□□ -0.85
EPB41-201ENST00000343067 ZFP91Q96JP5 570 aaPredicted RBP9.73□□□□□ -0.85
EPB41-201ENST00000343067 FAM135AQ9P2D6 1515 aa9.73□□□□□ -0.85
EPB41-201ENST00000343067 PREX2Q70Z35 1606 aa9.73□□□□□ -0.85
EPB41-201ENST00000343067 GIMAP7Q8NHV1 300 aa9.73□□□□□ -0.85
EPB41-201ENST00000343067 ST20-MTHFSA0A0A6YYL1 179 aa9.72□□□□□ -0.85
EPB41-201ENST00000343067 PLEKHD1A6NEE1 506 aa9.72□□□□□ -0.85
EPB41-201ENST00000343067 SH3BP5O60239 455 aa9.72□□□□□ -0.85
EPB41-201ENST00000343067 ZNF622Q969S3 477 aaKnown RBP eCLIP9.72□□□□□ -0.851e-8■□□□□ 10.5
EPB41-201ENST00000343067 SWAP70Q9UH65 585 aa9.72□□□□□ -0.85
EPB41-201ENST00000343067 GPRASP1Q5JY77 1395 aa9.72□□□□□ -0.85
EPB41-201ENST00000343067 KTN1Q86UP2 1357 aaKnown RBP9.72□□□□□ -0.85
EPB41-201ENST00000343067 PRAG1Q86YV5 1406 aa9.72□□□□□ -0.85
EPB41-201ENST00000343067 KDM4AO75164 1064 aa9.72□□□□□ -0.85
EPB41-201ENST00000343067 CARD11Q9BXL7 1154 aa9.72□□□□□ -0.85
EPB41-201ENST00000343067 BRD4O60885 1362 aaPredicted RBP9.72□□□□□ -0.85
EPB41-201ENST00000343067 UNC13BO14795 1591 aa9.72□□□□□ -0.85
EPB41-201ENST00000343067 ZMAT2Q96NC0 199 aaKnown RBP9.71□□□□□ -0.85
EPB41-201ENST00000343067 CCDC141Q6ZP82 1450 aa9.71□□□□□ -0.85
EPB41-201ENST00000343067 ARMCX6Q7L4S7 300 aa9.71□□□□□ -0.86
EPB41-201ENST00000343067 MAST1Q9Y2H9 1570 aa9.71□□□□□ -0.86
EPB41-201ENST00000343067 GZF1Q9H116 711 aaPredicted RBP9.71□□□□□ -0.86
EPB41-201ENST00000343067 HDAC5Q9UQL6 1122 aa9.7□□□□□ -0.86
EPB41-201ENST00000343067 PARD3Q8TEW0 1356 aa9.7□□□□□ -0.86
EPB41-201ENST00000343067 H0YHG0 523 aa9.7□□□□□ -0.86
EPB41-201ENST00000343067 SARNPP82979 210 aaKnown RBP9.7□□□□□ -0.86
EPB41-201ENST00000343067 MNS1Q8NEH6 495 aa9.7□□□□□ -0.86
EPB41-201ENST00000343067 LAMC1P11047 1609 aa9.7□□□□□ -0.86
EPB41-201ENST00000343067 SLMAPQ14BN4 828 aa9.7□□□□□ -0.86
EPB41-201ENST00000343067 PER1O15534 1290 aaPredicted RBP9.7□□□□□ -0.86
EPB41-201ENST00000343067 ERCC6Q03468 1493 aa9.7□□□□□ -0.86
EPB41-201ENST00000343067 SPRYD3Q8NCJ5 442 aa9.7□□□□□ -0.86
EPB41-201ENST00000343067 HNRNPMP52272 730 aaKnown RBP eCLIP9.69□□□□□ -0.861e-6■■■□□ 18.9
EPB41-201ENST00000343067 MYBBP1AQ9BQG0 1328 aaKnown RBP9.69□□□□□ -0.86
EPB41-201ENST00000343067 AEBP2Q6ZN18 517 aaPredicted RBP9.69□□□□□ -0.86
EPB41-201ENST00000343067 SEPT11Q9NVA2 429 aaKnown RBP9.69□□□□□ -0.86
EPB41-201ENST00000343067 A2MP01023 1474 aa9.69□□□□□ -0.86
EPB41-201ENST00000343067 PRDM15P57071 1507 aaPredicted RBP9.68□□□□□ -0.86
EPB41-201ENST00000343067 IBSPP21815 317 aaPredicted RBP9.68□□□□□ -0.86
EPB41-201ENST00000343067 DCAF11Q8TEB1 546 aa9.68□□□□□ -0.86
EPB41-201ENST00000343067 IPO4Q8TEX9 1081 aaKnown RBP9.68□□□□□ -0.86
EPB41-201ENST00000343067 MAGI2Q86UL8 1455 aa9.68□□□□□ -0.86
EPB41-201ENST00000343067 TTC37Q6PGP7 1564 aa9.68□□□□□ -0.86
EPB41-201ENST00000343067 MTERF4Q7Z6M4 381 aaKnown RBP9.68□□□□□ -0.86
EPB41-201ENST00000343067 ATP10AO60312 1499 aa9.67□□□□□ -0.86
EPB41-201ENST00000343067 COL17A1Q9UMD9 1497 aaPredicted RBP9.67□□□□□ -0.86
EPB41-201ENST00000343067 CHGAP10645 457 aaKnown RBP9.67□□□□□ -0.86
EPB41-201ENST00000343067 FBLN2P98095 1184 aa9.67□□□□□ -0.86
EPB41-201ENST00000343067 TSPY2A6NKD2 308 aa9.67□□□□□ -0.86
EPB41-201ENST00000343067 TSPY3P0CV98 308 aa9.67□□□□□ -0.86
EPB41-201ENST00000343067 TSPY8P0CW00 308 aa9.67□□□□□ -0.86
EPB41-201ENST00000343067 TSPY1Q01534 308 aa9.67□□□□□ -0.86
EPB41-201ENST00000343067 ZNHIT6Q9NWK9 470 aaKnown RBP9.67□□□□□ -0.86
EPB41-201ENST00000343067 IQGAP3Q86VI3 1631 aa9.67□□□□□ -0.86
EPB41-201ENST00000343067 ENOX2Q16206 610 aaKnown RBP9.67□□□□□ -0.86
EPB41-201ENST00000343067 PLXNC1O60486 1568 aa9.67□□□□□ -0.86
EPB41-201ENST00000343067 SYCP2Q9BX26 1530 aa9.67□□□□□ -0.86
EPB41-201ENST00000343067 GBP2P32456 591 aaPredicted RBP9.67□□□□□ -0.86
EPB41-201ENST00000343067 TMC1Q8TDI8 760 aa9.67□□□□□ -0.86
EPB41-201ENST00000343067 TESK2Q96S53 571 aa9.67□□□□□ -0.86
EPB41-201ENST00000343067 DCTN1Q14203 1278 aa9.66□□□□□ -0.86
EPB41-201ENST00000343067 HMMRO75330 724 aa9.66□□□□□ -0.86
EPB41-201ENST00000343067 ZMYM4Q5VZL5 1548 aa9.66□□□□□ -0.86
EPB41-201ENST00000343067 ECM2O94769 699 aaPredicted RBP9.66□□□□□ -0.86
EPB41-201ENST00000343067 KDM2AQ9Y2K7 1162 aa9.66□□□□□ -0.86
EPB41-201ENST00000343067 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.66□□□□□ -0.861e-7■□□□□ 9.1
EPB41-201ENST00000343067 NBPF1Q3BBV0 1214 aa9.65□□□□□ -0.86
EPB41-201ENST00000343067 SENP3-EIF4A1A0A087X0R7 540 aa9.65□□□□□ -0.86
EPB41-201ENST00000343067 SHROOM2Q13796 1616 aa9.65□□□□□ -0.86
EPB41-201ENST00000343067 MYH16Q9H6N6 1097 aa9.65□□□□□ -0.86
EPB41-201ENST00000343067 INSRP06213 1382 aa9.65□□□□□ -0.86
EPB41-201ENST00000343067 CCDC144AA2RUR9 1427 aa9.65□□□□□ -0.87
EPB41-201ENST00000343067 LEKR1Q6ZMV7 388 aa9.65□□□□□ -0.87
EPB41-201ENST00000343067 MYO5CQ9NQX4 1742 aa9.64□□□□□ -0.87
EPB41-201ENST00000343067 TRIM29Q14134 588 aa9.64□□□□□ -0.87
EPB41-201ENST00000343067 DDX12PQ92771 950 aa9.64□□□□□ -0.87
EPB41-201ENST00000343067 RNF17Q9BXT8 1623 aaKnown RBP9.64□□□□□ -0.87
EPB41-201ENST00000343067 NEXNQ0ZGT2 675 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms