RNA–Protein interactions for RNA: ENST00000341990.8

CNTNAP3B-202, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-202ENST00000341990 PDE3AQ14432 1141 aa25.8■■□□□ 1.72
CNTNAP3B-202ENST00000341990 NFKBIBQ15653 356 aa25.8■■□□□ 1.72
CNTNAP3B-202ENST00000341990 TCP11L2Q8N4U5 519 aa25.8■■□□□ 1.72
CNTNAP3B-202ENST00000341990 C14orf93Q9H972 538 aaKnown RBP25.8■■□□□ 1.72
CNTNAP3B-202ENST00000341990 NGEFQ8N5V2 710 aa25.79■■□□□ 1.72
CNTNAP3B-202ENST00000341990 CLUAP1Q96AJ1 413 aa25.79■■□□□ 1.72
CNTNAP3B-202ENST00000341990 CGNL1Q0VF96 1302 aa25.79■■□□□ 1.72
CNTNAP3B-202ENST00000341990 TNNQ9UQP3 1299 aa25.79■■□□□ 1.72
CNTNAP3B-202ENST00000341990 LMTK2Q8IWU2 1503 aa25.78■■□□□ 1.72
CNTNAP3B-202ENST00000341990 QRICH2Q9H0J4 1663 aa25.78■■□□□ 1.72
CNTNAP3B-202ENST00000341990 MTHFSP49914 203 aa25.78■■□□□ 1.72
CNTNAP3B-202ENST00000341990 BCL2L13Q9BXK5 485 aa25.78■■□□□ 1.72
CNTNAP3B-202ENST00000341990 SETBP1Q9Y6X0 1596 aa25.77■■□□□ 1.72
CNTNAP3B-202ENST00000341990 RUNDC1Q96C34 613 aa25.77■■□□□ 1.72
CNTNAP3B-202ENST00000341990 ZNF518AQ6AHZ1 1483 aa25.77■■□□□ 1.72
CNTNAP3B-202ENST00000341990 ADGRB1O14514 1584 aa25.77■■□□□ 1.72
CNTNAP3B-202ENST00000341990 IL27Q8NEV9 243 aa25.76■■□□□ 1.71
CNTNAP3B-202ENST00000341990 SENP3Q9H4L4 574 aaPredicted RBP25.75■■□□□ 1.71
CNTNAP3B-202ENST00000341990 RARSP54136 660 aaKnown RBP25.75■■□□□ 1.71
CNTNAP3B-202ENST00000341990 ZC3H13Q5T200 1668 aaKnown RBP25.74■■□□□ 1.71
CNTNAP3B-202ENST00000341990 PPLO60437 1756 aa25.74■■□□□ 1.71
CNTNAP3B-202ENST00000341990 RLBP1P12271 317 aa25.74■■□□□ 1.71
CNTNAP3B-202ENST00000341990 IQSEC2Q5JU85 1478 aa25.73■■□□□ 1.71
CNTNAP3B-202ENST00000341990 SEC24BO95487 1268 aa25.73■■□□□ 1.71
CNTNAP3B-202ENST00000341990 FRMPD1Q5SYB0 1578 aa25.72■■□□□ 1.71
CNTNAP3B-202ENST00000341990 PHF23Q9BUL5 403 aaPredicted RBP25.71■■□□□ 1.71
CNTNAP3B-202ENST00000341990 USP19O94966 1318 aa25.71■■□□□ 1.71
CNTNAP3B-202ENST00000341990 SAFB2Q14151 953 aaKnown RBP eCLIP25.7■■□□□ 1.7
CNTNAP3B-202ENST00000341990 NINLQ9Y2I6 1382 aa25.69■■□□□ 1.7
CNTNAP3B-202ENST00000341990 PCDHB15Q9Y5E8 787 aa25.69■■□□□ 1.7
CNTNAP3B-202ENST00000341990 CABP2Q9NPB3 220 aa25.67■■□□□ 1.7
CNTNAP3B-202ENST00000341990 POGZQ7Z3K3 1410 aa25.66■■□□□ 1.7
CNTNAP3B-202ENST00000341990 U2AF1L5P0DN76 240 aaPredicted RBP25.65■■□□□ 1.7
CNTNAP3B-202ENST00000341990 U2AF1Q01081 240 aaKnown RBP eCLIP25.65■■□□□ 1.7
CNTNAP3B-202ENST00000341990 WDR63Q8IWG1 891 aa25.65■■□□□ 1.7
CNTNAP3B-202ENST00000341990 FRAT2O75474 233 aaPredicted RBP25.64■■□□□ 1.7
CNTNAP3B-202ENST00000341990 GSE1Q14687 1217 aa25.64■■□□□ 1.7
CNTNAP3B-202ENST00000341990 RTN4Q9NQC3 1192 aaKnown RBP25.64■■□□□ 1.7
CNTNAP3B-202ENST00000341990 CFAP53Q96M91 514 aa25.64■■□□□ 1.69
CNTNAP3B-202ENST00000341990 TULP4Q9NRJ4 1543 aa25.64■■□□□ 1.69
CNTNAP3B-202ENST00000341990 MAPK8IP3Q9UPT6 1336 aa25.63■■□□□ 1.69
CNTNAP3B-202ENST00000341990 GLI2P10070 1586 aa25.63■■□□□ 1.69
CNTNAP3B-202ENST00000341990 VIRMAQ69YN4 1812 aaKnown RBP25.63■■□□□ 1.69
CNTNAP3B-202ENST00000341990 CD109Q6YHK3 1445 aa25.63■■□□□ 1.69
CNTNAP3B-202ENST00000341990 ABCC3O15438 1527 aa25.62■■□□□ 1.69
CNTNAP3B-202ENST00000341990 EVC2Q86UK5 1308 aa25.62■■□□□ 1.69
CNTNAP3B-202ENST00000341990 RPGRIP1LQ68CZ1 1315 aa25.61■■□□□ 1.69
CNTNAP3B-202ENST00000341990 HECW2Q9P2P5 1572 aa25.61■■□□□ 1.69
CNTNAP3B-202ENST00000341990 SIGLEC1Q9BZZ2 1709 aa25.6■■□□□ 1.69
CNTNAP3B-202ENST00000341990 ANKRD36BQ8N2N9 1353 aa25.6■■□□□ 1.69
CNTNAP3B-202ENST00000341990 USP32Q8NFA0 1604 aa25.6■■□□□ 1.69
CNTNAP3B-202ENST00000341990 RAPGEF3O95398 923 aa25.6■■□□□ 1.69
CNTNAP3B-202ENST00000341990 MLH3Q9UHC1 1453 aa25.59■■□□□ 1.69
CNTNAP3B-202ENST00000341990 CCDC27Q2M243 656 aa25.59■■□□□ 1.69
CNTNAP3B-202ENST00000341990 NPM1P06748 294 aaKnown RBP eCLIP25.59■■□□□ 1.69
CNTNAP3B-202ENST00000341990 TSR2Q969E8 191 aaKnown RBP25.59■■□□□ 1.69
CNTNAP3B-202ENST00000341990 STK26Q9P289 416 aa25.59■■□□□ 1.69
CNTNAP3B-202ENST00000341990 PMFBP1Q8TBY8 1022 aa25.57■■□□□ 1.68
CNTNAP3B-202ENST00000341990 ARHGEF28Q8N1W1 1705 aaKnown RBP25.57■■□□□ 1.68
CNTNAP3B-202ENST00000341990 PDZRN3Q9UPQ7 1066 aa25.57■■□□□ 1.68
CNTNAP3B-202ENST00000341990 NLRP1Q9C000 1473 aa25.55■■□□□ 1.68
CNTNAP3B-202ENST00000341990 VGFO15240 615 aaPredicted RBP25.55■■□□□ 1.68
CNTNAP3B-202ENST00000341990 MYH16Q9H6N6 1097 aa25.55■■□□□ 1.68
CNTNAP3B-202ENST00000341990 BRPF3Q9ULD4 1205 aa25.55■■□□□ 1.68
CNTNAP3B-202ENST00000341990 GGNBP2Q9H3C7 697 aa25.55■■□□□ 1.68
CNTNAP3B-202ENST00000341990 CAMSAP1Q5T5Y3 1602 aa25.54■■□□□ 1.68
CNTNAP3B-202ENST00000341990 NEXMIFQ5QGS0 1516 aa25.54■■□□□ 1.68
CNTNAP3B-202ENST00000341990 U2SURPO15042 1029 aaKnown RBP25.54■■□□□ 1.68
CNTNAP3B-202ENST00000341990 A0A1W2PP64 1363 aa25.53■■□□□ 1.68
CNTNAP3B-202ENST00000341990 IDI1Q13907 227 aa25.53■■□□□ 1.68
CNTNAP3B-202ENST00000341990 SRPK2P78362 688 aaKnown RBP25.51■■□□□ 1.67
CNTNAP3B-202ENST00000341990 NSD2O96028 1365 aa25.51■■□□□ 1.67
CNTNAP3B-202ENST00000341990 MVPQ14764 893 aaKnown RBP25.5■■□□□ 1.67
CNTNAP3B-202ENST00000341990 SLKQ9H2G2 1235 aaPredicted RBP25.5■■□□□ 1.67
CNTNAP3B-202ENST00000341990 PUS7Q96PZ0 661 aaKnown RBP25.49■■□□□ 1.67
CNTNAP3B-202ENST00000341990 PIK3C2BO00750 1634 aa25.49■■□□□ 1.67
CNTNAP3B-202ENST00000341990 EXOSC9Q06265 439 aaKnown RBP25.49■■□□□ 1.67
CNTNAP3B-202ENST00000341990 FTSJ3Q8IY81 847 aaKnown RBP25.49■■□□□ 1.67
CNTNAP3B-202ENST00000341990 ADGRB2O60241 1585 aa25.48■■□□□ 1.67
CNTNAP3B-202ENST00000341990 ZKSCAN2Q63HK3 967 aa25.48■■□□□ 1.67
CNTNAP3B-202ENST00000341990 PLEKHF1Q96S99 279 aa25.48■■□□□ 1.67
CNTNAP3B-202ENST00000341990 RWDD1Q9H446 243 aaPredicted RBP25.48■■□□□ 1.67
CNTNAP3B-202ENST00000341990 AAMPQ13685 434 aa25.48■■□□□ 1.67
CNTNAP3B-202ENST00000341990 DZIP1LQ8IYY4 767 aaKnown RBP25.47■■□□□ 1.67
CNTNAP3B-202ENST00000341990 MINK1Q8N4C8 1332 aaPredicted RBP25.47■■□□□ 1.67
CNTNAP3B-202ENST00000341990 SMC4Q9NTJ3 1288 aa25.47■■□□□ 1.67
CNTNAP3B-202ENST00000341990 TRIM35Q9UPQ4 493 aa25.47■■□□□ 1.67
CNTNAP3B-202ENST00000341990 ABCC11Q96J66 1382 aa25.47■■□□□ 1.67
CNTNAP3B-202ENST00000341990 CFAP74Q9C0B2 1584 aa25.47■■□□□ 1.67
CNTNAP3B-202ENST00000341990 TMPOP42166 694 aaKnown RBP25.46■■□□□ 1.67
CNTNAP3B-202ENST00000341990 TRIM27P14373 513 aa25.44■■□□□ 1.66
CNTNAP3B-202ENST00000341990 SSH1Q8WYL5 1049 aa25.44■■□□□ 1.66
CNTNAP3B-202ENST00000341990 FYB1O15117 783 aa25.43■■□□□ 1.66
CNTNAP3B-202ENST00000341990 TBC1D32Q96NH3 1257 aa25.43■■□□□ 1.66
CNTNAP3B-202ENST00000341990 BECN1Q14457 450 aa25.42■■□□□ 1.66
CNTNAP3B-202ENST00000341990 PRAM1Q96QH2 718 aa25.42■■□□□ 1.66
CNTNAP3B-202ENST00000341990 COL3A1P02461 1466 aaPredicted RBP25.41■■□□□ 1.66
CNTNAP3B-202ENST00000341990 NCBP3Q53F19 620 aaKnown RBP25.4■■□□□ 1.66
CNTNAP3B-202ENST00000341990 UPF2Q9HAU5 1272 aaKnown RBP25.4■■□□□ 1.66
CNTNAP3B-202ENST00000341990 DIP2CQ9Y2E4 1556 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms