RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 TPM2P07951 284 aa15.31■□□□□ 0.04
RTN3-203ENST00000341307 GTF2E1P29083 439 aaPredicted RBP15.31■□□□□ 0.04
RTN3-203ENST00000341307 BBXQ8WY36 941 aaPredicted RBP15.31■□□□□ 0.04
RTN3-203ENST00000341307 KIF1BO60333 1816 aa15.3■□□□□ 0.04
RTN3-203ENST00000341307 C3P01024 1663 aa15.29■□□□□ 0.04
RTN3-203ENST00000341307 TMF1P82094 1093 aa15.28■□□□□ 0.04
RTN3-203ENST00000341307 PANK2Q9BZ23 570 aa15.28■□□□□ 0.04
RTN3-203ENST00000341307 PPP6R1Q9UPN7 881 aa15.28■□□□□ 0.04
RTN3-203ENST00000341307 NUTM2DQ5VT03 806 aaPredicted RBP15.27■□□□□ 0.04
RTN3-203ENST00000341307 NAP1L2Q9ULW6 460 aaPredicted RBP15.27■□□□□ 0.04
RTN3-203ENST00000341307 IQGAP1P46940 1657 aa15.27■□□□□ 0.04
RTN3-203ENST00000341307 TAF7LQ5H9L4 462 aa15.27■□□□□ 0.03
RTN3-203ENST00000341307 NOS1P29475 1434 aa15.27■□□□□ 0.03
RTN3-203ENST00000341307 CAMSAP1Q5T5Y3 1602 aa15.27■□□□□ 0.03
RTN3-203ENST00000341307 RRP1P56182 461 aaKnown RBP15.26■□□□□ 0.03
RTN3-203ENST00000341307 SENP3Q9H4L4 574 aaPredicted RBP15.26■□□□□ 0.03
RTN3-203ENST00000341307 PANK3Q9H999 370 aa15.26■□□□□ 0.03
RTN3-203ENST00000341307 ERBB4Q15303 1308 aa15.26■□□□□ 0.03
RTN3-203ENST00000341307 SCAF11Q99590 1463 aaKnown RBP15.26■□□□□ 0.03
RTN3-203ENST00000341307 PER1O15534 1290 aaPredicted RBP15.25■□□□□ 0.03
RTN3-203ENST00000341307 FSD2A1L4K1 749 aa15.25■□□□□ 0.03
RTN3-203ENST00000341307 ADGRB3O60242 1522 aa15.25■□□□□ 0.03
RTN3-203ENST00000341307 CC2D1BQ5T0F9 858 aaKnown RBP15.24■□□□□ 0.03
RTN3-203ENST00000341307 STAC3Q96MF2 364 aa15.24■□□□□ 0.03
RTN3-203ENST00000341307 IFT172Q9UG01 1749 aa15.24■□□□□ 0.03
RTN3-203ENST00000341307 NEURL4Q96JN8 1562 aa15.24■□□□□ 0.03
RTN3-203ENST00000341307 MYOM2P54296 1465 aa15.24■□□□□ 0.03
RTN3-203ENST00000341307 ARXQ96QS3 562 aa15.23■□□□□ 0.03
RTN3-203ENST00000341307 TMC1Q8TDI8 760 aa15.23■□□□□ 0.03
RTN3-203ENST00000341307 CHMP4BQ9H444 224 aaKnown RBP15.22■□□□□ 0.03
RTN3-203ENST00000341307 ESPNB1AK53 854 aa15.22■□□□□ 0.03
RTN3-203ENST00000341307 SYNMO15061 1565 aa15.21■□□□□ 0.03
RTN3-203ENST00000341307 IDI1Q13907 227 aa15.21■□□□□ 0.03
RTN3-203ENST00000341307 GOLGA6L3A6NEY3 463 aa15.2■□□□□ 0.02
RTN3-203ENST00000341307 SMAP1Q8IYB5 467 aaPredicted RBP15.2■□□□□ 0.02
RTN3-203ENST00000341307 MYBBP1AQ9BQG0 1328 aaKnown RBP15.2■□□□□ 0.02
RTN3-203ENST00000341307 TNRQ92752 1358 aa15.2■□□□□ 0.02
RTN3-203ENST00000341307 RALBP1Q15311 655 aa15.2■□□□□ 0.02
RTN3-203ENST00000341307 TMEM132EQ6IEE7 984 aa15.2■□□□□ 0.02
RTN3-203ENST00000341307 PNISRQ8TF01 805 aaKnown RBP15.2■□□□□ 0.02
RTN3-203ENST00000341307 KTN1Q86UP2 1357 aaKnown RBP15.19■□□□□ 0.02
RTN3-203ENST00000341307 ZHX1Q9UKY1 873 aaPredicted RBP15.19■□□□□ 0.02
RTN3-203ENST00000341307 KIAA1210Q9ULL0 1709 aa15.19■□□□□ 0.02
RTN3-203ENST00000341307 ERVK-7P63135 1459 aa15.19■□□□□ 0.02
RTN3-203ENST00000341307 NRXN1Q9ULB1 1477 aa15.19■□□□□ 0.02
RTN3-203ENST00000341307 PPLO60437 1756 aa15.18■□□□□ 0.02
RTN3-203ENST00000341307 LMTK3Q96Q04 1460 aa15.18■□□□□ 0.02
RTN3-203ENST00000341307 PARD3Q8TEW0 1356 aa15.18■□□□□ 0.02
RTN3-203ENST00000341307 C8orf34Q49A92 452 aa15.18■□□□□ 0.02
RTN3-203ENST00000341307 TRAK1Q9UPV9 953 aa15.18■□□□□ 0.02
RTN3-203ENST00000341307 EIF3AQ14152 1382 aaKnown RBP15.18■□□□□ 0.02
RTN3-203ENST00000341307 ZC3H13Q5T200 1668 aaKnown RBP15.17■□□□□ 0.02
RTN3-203ENST00000341307 PIK3C2GO75747 1445 aa15.17■□□□□ 0.02
RTN3-203ENST00000341307 ARHGAP31Q2M1Z3 1444 aa15.17■□□□□ 0.02
RTN3-203ENST00000341307 RIPK4P57078 832 aa15.16■□□□□ 0.02
RTN3-203ENST00000341307 KIAA1211Q6ZU35 1233 aa15.16■□□□□ 0.02
RTN3-203ENST00000341307 PIK3C2BO00750 1634 aa15.16■□□□□ 0.02
RTN3-203ENST00000341307 CANXP27824 592 aaKnown RBP15.15■□□□□ 0.02
RTN3-203ENST00000341307 C14orf93Q9H972 538 aaKnown RBP15.15■□□□□ 0.02
RTN3-203ENST00000341307 PREX1Q8TCU6 1659 aa15.15■□□□□ 0.02
RTN3-203ENST00000341307 IPO4Q8TEX9 1081 aaKnown RBP15.14■□□□□ 0.01
RTN3-203ENST00000341307 BRD4O60885 1362 aaPredicted RBP15.14■□□□□ 0.01
RTN3-203ENST00000341307 SPATA31D1Q6ZQQ2 1576 aa15.14■□□□□ 0.01
RTN3-203ENST00000341307 FAM161AQ3B820 660 aa15.13■□□□□ 0.01
RTN3-203ENST00000341307 NLRP13Q86W25 1043 aa15.13■□□□□ 0.01
RTN3-203ENST00000341307 STAG3Q9UJ98 1225 aa15.13■□□□□ 0.01
RTN3-203ENST00000341307 SETD1BQ9UPS6 1966 aaKnown RBP15.13■□□□□ 0.01
RTN3-203ENST00000341307 CDCA8Q53HL2 280 aa15.12■□□□□ 0.01
RTN3-203ENST00000341307 PAXIP1Q6ZW49 1069 aaPredicted RBP15.12■□□□□ 0.01
RTN3-203ENST00000341307 NEXMIFQ5QGS0 1516 aa15.12■□□□□ 0.01
RTN3-203ENST00000341307 RPGRIP1LQ68CZ1 1315 aa15.12■□□□□ 0.01
RTN3-203ENST00000341307 NCKAP5LQ9HCH0 1330 aa15.12■□□□□ 0.01
RTN3-203ENST00000341307 KNSTRNQ9Y448 316 aa15.12■□□□□ 0.01
RTN3-203ENST00000341307 MYOM1P52179 1685 aa15.12■□□□□ 0.01
RTN3-203ENST00000341307 MYO3AQ8NEV4 1616 aa15.11■□□□□ 0.01
RTN3-203ENST00000341307 RCAN3Q9UKA8 241 aa15.11■□□□□ 0.01
RTN3-203ENST00000341307 MYO5BQ9ULV0 1848 aa15.11■□□□□ 0.01
RTN3-203ENST00000341307 ADGRB1O14514 1584 aa15.11■□□□□ 0.01
RTN3-203ENST00000341307 MAP7D2Q96T17 732 aa15.1■□□□□ 0.01
RTN3-203ENST00000341307 SLC52A1Q9NWF4 448 aa15.1■□□□□ 0.01
RTN3-203ENST00000341307 LRPPRCP42704 1394 aaKnown RBP15.1■□□□□ 0.01
RTN3-203ENST00000341307 VGFO15240 615 aaPredicted RBP15.1■□□□□ 0.01
RTN3-203ENST00000341307 KDM5AP29375 1690 aaKnown RBP15.1■□□□□ 0.01
RTN3-203ENST00000341307 SETBP1Q9Y6X0 1596 aa15.09■□□□□ 0.01
RTN3-203ENST00000341307 LTKP29376 864 aa15.09■□□□□ 0.01
RTN3-203ENST00000341307 MRE11P49959 708 aa15.09■□□□□ 0.01
RTN3-203ENST00000341307 AMER1Q5JTC6 1135 aaPredicted RBP15.09■□□□□ 0.01
RTN3-203ENST00000341307 UTP14CQ5TAP6 766 aaKnown RBP15.09■□□□□ 0.01
RTN3-203ENST00000341307 PRDM10Q9NQV6 1147 aa15.09■□□□□ 0.01
RTN3-203ENST00000341307 CEP170BQ9Y4F5 1589 aaPredicted RBP15.09■□□□□ 0.01
RTN3-203ENST00000341307 MYH16Q9H6N6 1097 aa15.08■□□□□ 0.01
RTN3-203ENST00000341307 DMTNQ08495 405 aa15.08■□□□□ 0
RTN3-203ENST00000341307 SAFB2Q14151 953 aaKnown RBP eCLIP15.08■□□□□ 01e-7■■■■□ 23.5
RTN3-203ENST00000341307 KDM2BQ8NHM5 1336 aa15.08■□□□□ 0
RTN3-203ENST00000341307 GZF1Q9H116 711 aaPredicted RBP15.07■□□□□ 0
RTN3-203ENST00000341307 ANTXR1Q9H6X2 564 aa15.07■□□□□ 0
RTN3-203ENST00000341307 SLKQ9H2G2 1235 aaPredicted RBP15.07■□□□□ 0
RTN3-203ENST00000341307 TMEM51Q9NW97 253 aa15.07■□□□□ 0
RTN3-203ENST00000341307 STK26Q9P289 416 aa15.07■□□□□ 0
RTN3-203ENST00000341307 A2ML1A8K2U0 1454 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms