RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 STK26Q9P289 416 aa25.19■■□□□ 1.62
BRCC3-202ENST00000340647 YTHDC2Q9H6S0 1430 aaKnown RBP25.19■■□□□ 1.62
BRCC3-202ENST00000340647 CFAP70Q5T0N1 1121 aa25.18■■□□□ 1.62
BRCC3-202ENST00000340647 ORAI2Q96SN7 254 aa25.18■■□□□ 1.62
BRCC3-202ENST00000340647 ADGRB1O14514 1584 aa25.14■■□□□ 1.62
BRCC3-202ENST00000340647 DHX57Q6P158 1386 aaKnown RBP25.14■■□□□ 1.61
BRCC3-202ENST00000340647 SPATA31A6Q5VVP1 1343 aa25.13■■□□□ 1.61
BRCC3-202ENST00000340647 FMN2Q9NZ56 1722 aa25.12■■□□□ 1.61
BRCC3-202ENST00000340647 RGPD8O14715 1765 aaPredicted RBP25.12■■□□□ 1.61
BRCC3-202ENST00000340647 SOS2Q07890 1332 aaPredicted RBP25.1■■□□□ 1.61
BRCC3-202ENST00000340647 SIRT1Q96EB6 747 aa25.09■■□□□ 1.61
BRCC3-202ENST00000340647 PNPLA6Q8IY17 1366 aa25.08■■□□□ 1.61
BRCC3-202ENST00000340647 LRRC59Q96AG4 307 aaKnown RBP25.06■■□□□ 1.6
BRCC3-202ENST00000340647 DLC1Q96QB1 1528 aa25.06■■□□□ 1.6
BRCC3-202ENST00000340647 DCAF11Q8TEB1 546 aa25.05■■□□□ 1.6
BRCC3-202ENST00000340647 KDM2AQ9Y2K7 1162 aa25.04■■□□□ 1.6
BRCC3-202ENST00000340647 PXDNQ92626 1479 aa25.03■■□□□ 1.6
BRCC3-202ENST00000340647 NUTM2FA1L443 756 aa25.02■■□□□ 1.6
BRCC3-202ENST00000340647 NUTM2BA6NNL0 878 aaPredicted RBP25.01■■□□□ 1.59
BRCC3-202ENST00000340647 NUTM2EB1AL46 878 aaPredicted RBP25.01■■□□□ 1.59
BRCC3-202ENST00000340647 NUTM2AQ8IVF1 878 aaPredicted RBP25.01■■□□□ 1.59
BRCC3-202ENST00000340647 USP32Q8NFA0 1604 aa25.01■■□□□ 1.59
BRCC3-202ENST00000340647 COL22A1Q8NFW1 1626 aaPredicted RBP25.01■■□□□ 1.59
BRCC3-202ENST00000340647 ESCO1Q5FWF5 840 aa25■■□□□ 1.59
BRCC3-202ENST00000340647 MEX3CQ5U5Q3 659 aaKnown RBP25■■□□□ 1.59
BRCC3-202ENST00000340647 ZNF772Q68DY9 489 aaPredicted RBP24.99■■□□□ 1.59
BRCC3-202ENST00000340647 PRAM1Q96QH2 718 aa24.99■■□□□ 1.59
BRCC3-202ENST00000340647 ADGRB2O60241 1585 aa24.97■■□□□ 1.59
BRCC3-202ENST00000340647 ARHGEF28Q8N1W1 1705 aaKnown RBP24.97■■□□□ 1.59
BRCC3-202ENST00000340647 FOXO3O43524 673 aa24.96■■□□□ 1.59
BRCC3-202ENST00000340647 SAFB2Q14151 953 aaKnown RBP eCLIP24.96■■□□□ 1.595e-6■□□□□ 11
BRCC3-202ENST00000340647 UPF1Q92900 1129 aaKnown RBP eCLIP24.96■■□□□ 1.59
BRCC3-202ENST00000340647 KIF1AQ12756 1690 aa24.95■■□□□ 1.58
BRCC3-202ENST00000340647 STAC3Q96MF2 364 aa24.95■■□□□ 1.58
BRCC3-202ENST00000340647 TRAK1Q9UPV9 953 aa24.95■■□□□ 1.58
BRCC3-202ENST00000340647 XPCQ01831 940 aaPredicted RBP24.94■■□□□ 1.58
BRCC3-202ENST00000340647 NPHP3Q7Z494 1330 aa24.93■■□□□ 1.58
BRCC3-202ENST00000340647 KIAA1210Q9ULL0 1709 aa24.93■■□□□ 1.58
BRCC3-202ENST00000340647 MARF1Q9Y4F3 1742 aaKnown RBP24.91■■□□□ 1.58
BRCC3-202ENST00000340647 AFF2P51816 1311 aa24.9■■□□□ 1.58
BRCC3-202ENST00000340647 RXRBP28702 533 aa24.89■■□□□ 1.58
BRCC3-202ENST00000340647 POGKQ9P215 609 aa24.87■■□□□ 1.57
BRCC3-202ENST00000340647 PRR36Q9H6K5 1346 aa24.86■■□□□ 1.57
BRCC3-202ENST00000340647 ADAMTS2O95450 1211 aa24.86■■□□□ 1.57
BRCC3-202ENST00000340647 C8orf37Q96NL8 207 aa24.86■■□□□ 1.57
BRCC3-202ENST00000340647 HIRIP3Q9BW71 556 aaPredicted RBP24.86■■□□□ 1.57
BRCC3-202ENST00000340647 CDK12Q9NYV4 1490 aaPredicted RBP24.85■■□□□ 1.57
BRCC3-202ENST00000340647 NBPF1Q3BBV0 1214 aa24.85■■□□□ 1.57
BRCC3-202ENST00000340647 PHF8Q9UPP1 1060 aa24.85■■□□□ 1.57
BRCC3-202ENST00000340647 MINK1Q8N4C8 1332 aaPredicted RBP24.85■■□□□ 1.57
BRCC3-202ENST00000340647 SIN3AQ96ST3 1273 aa24.84■■□□□ 1.57
BRCC3-202ENST00000340647 ANKARQ7Z5J8 1434 aa24.84■■□□□ 1.57
BRCC3-202ENST00000340647 SPATA31A3Q5VYP0 1347 aa24.84■■□□□ 1.57
BRCC3-202ENST00000340647 TRPM3Q9HCF6 1732 aaPredicted RBP24.83■■□□□ 1.57
BRCC3-202ENST00000340647 KRT28Q7Z3Y7 464 aa24.82■■□□□ 1.56
BRCC3-202ENST00000340647 TULP4Q9NRJ4 1543 aa24.81■■□□□ 1.56
BRCC3-202ENST00000340647 L3MBTL2Q969R5 705 aa24.8■■□□□ 1.56
BRCC3-202ENST00000340647 ABCA3Q99758 1704 aa24.8■■□□□ 1.56
BRCC3-202ENST00000340647 WASLO00401 505 aaPredicted RBP24.79■■□□□ 1.56
BRCC3-202ENST00000340647 FNBP4Q8N3X1 1017 aaPredicted RBP24.79■■□□□ 1.56
BRCC3-202ENST00000340647 PMFBP1Q8TBY8 1022 aa24.78■■□□□ 1.56
BRCC3-202ENST00000340647 RGS12O14924 1447 aa24.78■■□□□ 1.56
BRCC3-202ENST00000340647 NGLY1Q96IV0 654 aa24.77■■□□□ 1.56
BRCC3-202ENST00000340647 QTRT2Q9H974 415 aaKnown RBP24.77■■□□□ 1.56
BRCC3-202ENST00000340647 ALS2Q96Q42 1657 aa24.77■■□□□ 1.56
BRCC3-202ENST00000340647 TNS3Q68CZ2 1445 aa24.76■■□□□ 1.55
BRCC3-202ENST00000340647 ATP7BP35670 1465 aa24.76■■□□□ 1.55
BRCC3-202ENST00000340647 BCL9LQ86UU0 1499 aa24.76■■□□□ 1.55
BRCC3-202ENST00000340647 SBNO1A3KN83 1393 aa24.75■■□□□ 1.55
BRCC3-202ENST00000340647 TRPM1Q7Z4N2 1603 aa24.75■■□□□ 1.55
BRCC3-202ENST00000340647 TOPAZ1Q8N9V7 1692 aa24.74■■□□□ 1.55
BRCC3-202ENST00000340647 ITSN1Q15811 1721 aa24.73■■□□□ 1.55
BRCC3-202ENST00000340647 RBM6P78332 1123 aaKnown RBP24.72■■□□□ 1.55
BRCC3-202ENST00000340647 CRYBG1Q9Y4K1 1723 aa24.72■■□□□ 1.55
BRCC3-202ENST00000340647 ATRNO75882 1429 aa24.71■■□□□ 1.55
BRCC3-202ENST00000340647 CABLES1Q8TDN4 633 aa24.71■■□□□ 1.55
BRCC3-202ENST00000340647 USP21Q9UK80 565 aa24.71■■□□□ 1.55
BRCC3-202ENST00000340647 SRCAPQ6ZRS2 3230 aa24.71■■□□□ 1.55
BRCC3-202ENST00000340647 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.71■■□□□ 1.55
BRCC3-202ENST00000340647 PSME1Q06323 249 aa24.69■■□□□ 1.54
BRCC3-202ENST00000340647 SLIT2O94813 1529 aa24.69■■□□□ 1.54
BRCC3-202ENST00000340647 NEUROD1Q13562 356 aa24.68■■□□□ 1.54
BRCC3-202ENST00000340647 NUDT16Q96DE0 195 aaKnown RBP24.68■■□□□ 1.54
BRCC3-202ENST00000340647 CDK19Q9BWU1 502 aa24.68■■□□□ 1.54
BRCC3-202ENST00000340647 QRICH2Q9H0J4 1663 aa24.68■■□□□ 1.54
BRCC3-202ENST00000340647 EIF3AQ14152 1382 aaKnown RBP24.67■■□□□ 1.54
BRCC3-202ENST00000340647 PLCH1Q4KWH8 1693 aa24.66■■□□□ 1.54
BRCC3-202ENST00000340647 NBPF8Q3BBV2 869 aa24.64■■□□□ 1.54
BRCC3-202ENST00000340647 TRPC5Q9UL62 973 aaPredicted RBP24.64■■□□□ 1.54
BRCC3-202ENST00000340647 ARHGEF10O15013 1369 aa24.63■■□□□ 1.53
BRCC3-202ENST00000340647 GLI3P10071 1580 aa24.63■■□□□ 1.53
BRCC3-202ENST00000340647 NWD2Q9ULI1 1742 aa24.61■■□□□ 1.53
BRCC3-202ENST00000340647 POLR3AO14802 1390 aaPredicted RBP24.61■■□□□ 1.53
BRCC3-202ENST00000340647 PLEKHG5O94827 1062 aa24.6■■□□□ 1.53
BRCC3-202ENST00000340647 EP400Q96L91 3159 aa24.6■■□□□ 1.53
BRCC3-202ENST00000340647 CENPJQ9HC77 1338 aaPredicted RBP24.6■■□□□ 1.53
BRCC3-202ENST00000340647 GPRASP1Q5JY77 1395 aa24.59■■□□□ 1.53
BRCC3-202ENST00000340647 NRAPQ86VF7 1730 aa24.59■■□□□ 1.53
BRCC3-202ENST00000340647 TRIM26Q12899 539 aaPredicted RBP24.59■■□□□ 1.53
BRCC3-202ENST00000340647 LMOD2Q6P5Q4 547 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms