RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 WAPLQ7Z5K2 1190 aa25.36■■□□□ 1.65
VSTM1-201ENST00000338372 PLEKHH1Q9ULM0 1364 aa25.35■■□□□ 1.65
VSTM1-201ENST00000338372 C14orf93Q9H972 538 aaKnown RBP25.35■■□□□ 1.65
VSTM1-201ENST00000338372 MYOM2P54296 1465 aa25.34■■□□□ 1.65
VSTM1-201ENST00000338372 YTHDC2Q9H6S0 1430 aaKnown RBP25.33■■□□□ 1.65
VSTM1-201ENST00000338372 NUTM2BA6NNL0 878 aaPredicted RBP25.32■■□□□ 1.64
VSTM1-201ENST00000338372 NUTM2EB1AL46 878 aaPredicted RBP25.32■■□□□ 1.64
VSTM1-201ENST00000338372 NUTM2AQ8IVF1 878 aaPredicted RBP25.32■■□□□ 1.64
VSTM1-201ENST00000338372 STK26Q9P289 416 aa25.32■■□□□ 1.64
VSTM1-201ENST00000338372 ZNF772Q68DY9 489 aaPredicted RBP25.31■■□□□ 1.64
VSTM1-201ENST00000338372 SIRT1Q96EB6 747 aa25.31■■□□□ 1.64
VSTM1-201ENST00000338372 MEX3CQ5U5Q3 659 aaKnown RBP25.3■■□□□ 1.64
VSTM1-201ENST00000338372 FMN2Q9NZ56 1722 aa25.29■■□□□ 1.64
VSTM1-201ENST00000338372 COL22A1Q8NFW1 1626 aaPredicted RBP25.29■■□□□ 1.64
VSTM1-201ENST00000338372 PXDNQ92626 1479 aa25.28■■□□□ 1.64
VSTM1-201ENST00000338372 HRCP23327 699 aa25.28■■□□□ 1.64
VSTM1-201ENST00000338372 CFAP70Q5T0N1 1121 aa25.28■■□□□ 1.64
VSTM1-201ENST00000338372 AFF2P51816 1311 aa25.26■■□□□ 1.63
VSTM1-201ENST00000338372 RGPD8O14715 1765 aaPredicted RBP25.26■■□□□ 1.63
VSTM1-201ENST00000338372 ADGRB1O14514 1584 aa25.24■■□□□ 1.63
VSTM1-201ENST00000338372 ESCO1Q5FWF5 840 aa25.23■■□□□ 1.63
VSTM1-201ENST00000338372 CDK12Q9NYV4 1490 aaPredicted RBP25.21■■□□□ 1.63
VSTM1-201ENST00000338372 NPHP3Q7Z494 1330 aa25.19■■□□□ 1.62
VSTM1-201ENST00000338372 DLC1Q96QB1 1528 aa25.19■■□□□ 1.62
VSTM1-201ENST00000338372 RXRBP28702 533 aa25.19■■□□□ 1.62
VSTM1-201ENST00000338372 DHX57Q6P158 1386 aaKnown RBP25.18■■□□□ 1.62
VSTM1-201ENST00000338372 NUTM2FA1L443 756 aa25.18■■□□□ 1.62
VSTM1-201ENST00000338372 FOXO3O43524 673 aa25.18■■□□□ 1.62
VSTM1-201ENST00000338372 C8orf37Q96NL8 207 aa25.18■■□□□ 1.62
VSTM1-201ENST00000338372 MARF1Q9Y4F3 1742 aaKnown RBP25.17■■□□□ 1.62
VSTM1-201ENST00000338372 KIF1AQ12756 1690 aa25.16■■□□□ 1.62
VSTM1-201ENST00000338372 ADAMTS2O95450 1211 aa25.15■■□□□ 1.62
VSTM1-201ENST00000338372 USP32Q8NFA0 1604 aa25.15■■□□□ 1.62
VSTM1-201ENST00000338372 XPCQ01831 940 aaPredicted RBP25.14■■□□□ 1.62
VSTM1-201ENST00000338372 FNBP4Q8N3X1 1017 aaPredicted RBP25.14■■□□□ 1.62
VSTM1-201ENST00000338372 QTRT2Q9H974 415 aaKnown RBP25.14■■□□□ 1.62
VSTM1-201ENST00000338372 PRAM1Q96QH2 718 aa25.13■■□□□ 1.61
VSTM1-201ENST00000338372 UPF1Q92900 1129 aaKnown RBP eCLIP25.12■■□□□ 1.61
VSTM1-201ENST00000338372 ADGRB2O60241 1585 aa25.12■■□□□ 1.61
VSTM1-201ENST00000338372 NGLY1Q96IV0 654 aa25.11■■□□□ 1.61
VSTM1-201ENST00000338372 RGS12O14924 1447 aa25.11■■□□□ 1.61
VSTM1-201ENST00000338372 RBM6P78332 1123 aaKnown RBP25.1■■□□□ 1.61
VSTM1-201ENST00000338372 SPATA31A3Q5VYP0 1347 aa25.1■■□□□ 1.61
VSTM1-201ENST00000338372 DCAF11Q8TEB1 546 aa25.09■■□□□ 1.61
VSTM1-201ENST00000338372 BCL9LQ86UU0 1499 aa25.08■■□□□ 1.6
VSTM1-201ENST00000338372 ATRNO75882 1429 aa25.07■■□□□ 1.6
VSTM1-201ENST00000338372 STAC3Q96MF2 364 aa25.07■■□□□ 1.6
VSTM1-201ENST00000338372 KDM2AQ9Y2K7 1162 aa25.07■■□□□ 1.6
VSTM1-201ENST00000338372 SAFB2Q14151 953 aaKnown RBP eCLIP25.06■■□□□ 1.6
VSTM1-201ENST00000338372 KRT28Q7Z3Y7 464 aa25.05■■□□□ 1.6
VSTM1-201ENST00000338372 PHF8Q9UPP1 1060 aa25.05■■□□□ 1.6
VSTM1-201ENST00000338372 USP21Q9UK80 565 aa25.04■■□□□ 1.6
VSTM1-201ENST00000338372 TRAK1Q9UPV9 953 aa25.04■■□□□ 1.6
VSTM1-201ENST00000338372 ARHGEF28Q8N1W1 1705 aaKnown RBP25.03■■□□□ 1.6
VSTM1-201ENST00000338372 ANKARQ7Z5J8 1434 aa25.03■■□□□ 1.6
VSTM1-201ENST00000338372 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.01■■□□□ 1.59
VSTM1-201ENST00000338372 TRPM3Q9HCF6 1732 aaPredicted RBP25.01■■□□□ 1.59
VSTM1-201ENST00000338372 PRR36Q9H6K5 1346 aa25.01■■□□□ 1.59
VSTM1-201ENST00000338372 ABCA3Q99758 1704 aa25■■□□□ 1.59
VSTM1-201ENST00000338372 POGKQ9P215 609 aa25■■□□□ 1.59
VSTM1-201ENST00000338372 SLIT2O94813 1529 aa25■■□□□ 1.59
VSTM1-201ENST00000338372 SBNO1A3KN83 1393 aa24.99■■□□□ 1.59
VSTM1-201ENST00000338372 TNS3Q68CZ2 1445 aa24.99■■□□□ 1.59
VSTM1-201ENST00000338372 TRPC5Q9UL62 973 aaPredicted RBP24.99■■□□□ 1.59
VSTM1-201ENST00000338372 KIAA1210Q9ULL0 1709 aa24.98■■□□□ 1.59
VSTM1-201ENST00000338372 HIRIP3Q9BW71 556 aaPredicted RBP24.97■■□□□ 1.59
VSTM1-201ENST00000338372 ALS2Q96Q42 1657 aa24.96■■□□□ 1.59
VSTM1-201ENST00000338372 TULP4Q9NRJ4 1543 aa24.96■■□□□ 1.59
VSTM1-201ENST00000338372 MINK1Q8N4C8 1332 aaPredicted RBP24.95■■□□□ 1.58
VSTM1-201ENST00000338372 WASLO00401 505 aaPredicted RBP24.94■■□□□ 1.58
VSTM1-201ENST00000338372 PMFBP1Q8TBY8 1022 aa24.94■■□□□ 1.58
VSTM1-201ENST00000338372 PSME1Q06323 249 aa24.93■■□□□ 1.58
VSTM1-201ENST00000338372 GLI3P10071 1580 aa24.93■■□□□ 1.58
VSTM1-201ENST00000338372 CABLES1Q8TDN4 633 aa24.92■■□□□ 1.58
VSTM1-201ENST00000338372 CRYBG1Q9Y4K1 1723 aa24.9■■□□□ 1.58
VSTM1-201ENST00000338372 NWD2Q9ULI1 1742 aa24.89■■□□□ 1.58
VSTM1-201ENST00000338372 PLCH1Q4KWH8 1693 aa24.89■■□□□ 1.58
VSTM1-201ENST00000338372 UNC5CLQ8IV45 518 aa24.89■■□□□ 1.58
VSTM1-201ENST00000338372 GJD4Q96KN9 370 aaPredicted RBP24.89■■□□□ 1.58
VSTM1-201ENST00000338372 EP400Q96L91 3159 aa24.89■■□□□ 1.57
VSTM1-201ENST00000338372 ATP7BP35670 1465 aa24.89■■□□□ 1.57
VSTM1-201ENST00000338372 NBPF1Q3BBV0 1214 aa24.88■■□□□ 1.57
VSTM1-201ENST00000338372 ARHGEF10O15013 1369 aa24.87■■□□□ 1.57
VSTM1-201ENST00000338372 RALGAPBQ86X10 1494 aa24.86■■□□□ 1.57
VSTM1-201ENST00000338372 EIF3AQ14152 1382 aaKnown RBP24.86■■□□□ 1.57
VSTM1-201ENST00000338372 BRWD3Q6RI45 1802 aa24.86■■□□□ 1.57
VSTM1-201ENST00000338372 ITSN1Q15811 1721 aa24.85■■□□□ 1.57
VSTM1-201ENST00000338372 TOPAZ1Q8N9V7 1692 aa24.85■■□□□ 1.57
VSTM1-201ENST00000338372 FAM83GA6ND36 823 aa24.83■■□□□ 1.57
VSTM1-201ENST00000338372 NRAPQ86VF7 1730 aa24.83■■□□□ 1.57
VSTM1-201ENST00000338372 NUDT16Q96DE0 195 aaKnown RBP24.82■■□□□ 1.56
VSTM1-201ENST00000338372 ATAD2Q6PL18 1390 aa24.81■■□□□ 1.56
VSTM1-201ENST00000338372 CDK19Q9BWU1 502 aa24.8■■□□□ 1.56
VSTM1-201ENST00000338372 ONECUT3O60422 494 aaPredicted RBP24.79■■□□□ 1.56
VSTM1-201ENST00000338372 VPS72Q15906 364 aa24.79■■□□□ 1.56
VSTM1-201ENST00000338372 GPRASP1Q5JY77 1395 aa24.79■■□□□ 1.56
VSTM1-201ENST00000338372 LMOD2Q6P5Q4 547 aa24.78■■□□□ 1.56
VSTM1-201ENST00000338372 POLR3AO14802 1390 aaPredicted RBP24.78■■□□□ 1.56
VSTM1-201ENST00000338372 L3MBTL2Q969R5 705 aa24.77■■□□□ 1.56
VSTM1-201ENST00000338372 COL14A1Q05707 1796 aaKnown RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms