RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 GZF1Q9H116 711 aaPredicted RBP15.19■□□□□ 0.02
RBM39-202ENST00000338163 RRAGDQ9NQL2 400 aaPredicted RBP15.19■□□□□ 0.02
RBM39-202ENST00000338163 CLTCQ00610 1675 aaKnown RBP15.18■□□□□ 0.02
RBM39-202ENST00000338163 COG6Q9Y2V7 657 aa15.18■□□□□ 0.02
RBM39-202ENST00000338163 USP19O94966 1318 aa15.18■□□□□ 0.02
RBM39-202ENST00000338163 CAMSAP1Q5T5Y3 1602 aa15.18■□□□□ 0.02
RBM39-202ENST00000338163 INSRP06213 1382 aa15.17■□□□□ 0.02
RBM39-202ENST00000338163 PANK1Q8TE04 598 aa15.17■□□□□ 0.02
RBM39-202ENST00000338163 UPF2Q9HAU5 1272 aaKnown RBP15.17■□□□□ 0.02
RBM39-202ENST00000338163 PTPRTO14522 1441 aa15.17■□□□□ 0.02
RBM39-202ENST00000338163 ARHGAP31Q2M1Z3 1444 aa15.17■□□□□ 0.02
RBM39-202ENST00000338163 L1TD1Q5T7N2 865 aaKnown RBP15.16■□□□□ 0.02
RBM39-202ENST00000338163 UGGT1Q9NYU2 1555 aa15.16■□□□□ 0.02
RBM39-202ENST00000338163 ZNF521Q96K83 1311 aa15.16■□□□□ 0.02
RBM39-202ENST00000338163 NAP1L5Q96NT1 182 aaPredicted RBP15.16■□□□□ 0.02
RBM39-202ENST00000338163 ZC3H13Q5T200 1668 aaKnown RBP15.15■□□□□ 0.02
RBM39-202ENST00000338163 IDI1Q13907 227 aa15.15■□□□□ 0.02
RBM39-202ENST00000338163 TRPM1Q7Z4N2 1603 aa15.15■□□□□ 0.02
RBM39-202ENST00000338163 EIF3AQ14152 1382 aaKnown RBP15.14■□□□□ 0.01
RBM39-202ENST00000338163 CLUAP1Q96AJ1 413 aa15.13■□□□□ 0.01
RBM39-202ENST00000338163 NEUROD2Q15784 382 aa15.13■□□□□ 0.01
RBM39-202ENST00000338163 DMRT2Q9Y5R5 561 aa15.13■□□□□ 0.01
RBM39-202ENST00000338163 MAPK8IP3Q9UPT6 1336 aa15.13■□□□□ 0.01
RBM39-202ENST00000338163 GPRASP1Q5JY77 1395 aa15.13■□□□□ 0.01
RBM39-202ENST00000338163 NOS1P29475 1434 aa15.13■□□□□ 0.01
RBM39-202ENST00000338163 AMER1Q5JTC6 1135 aaPredicted RBP15.13■□□□□ 0.01
RBM39-202ENST00000338163 STAG3Q9UJ98 1225 aa15.13■□□□□ 0.01
RBM39-202ENST00000338163 TRPM2O94759 1503 aa15.12■□□□□ 0.01
RBM39-202ENST00000338163 NKTRP30414 1462 aaKnown RBP15.12■□□□□ 0.01
RBM39-202ENST00000338163 SLC52A1Q9NWF4 448 aa15.12■□□□□ 0.01
RBM39-202ENST00000338163 ERVK-7P63135 1459 aa15.12■□□□□ 0.01
RBM39-202ENST00000338163 CGNL1Q0VF96 1302 aa15.11■□□□□ 0.01
RBM39-202ENST00000338163 SPHKAPQ2M3C7 1700 aa15.11■□□□□ 0.01
RBM39-202ENST00000338163 CENPJQ9HC77 1338 aaPredicted RBP15.11■□□□□ 0.01
RBM39-202ENST00000338163 GOLGA6L3A6NEY3 463 aa15.11■□□□□ 0.01
RBM39-202ENST00000338163 E9PSI1 815 aa15.11■□□□□ 0.01
RBM39-202ENST00000338163 PANK2Q9BZ23 570 aa15.11■□□□□ 0.01
RBM39-202ENST00000338163 MADDQ8WXG6 1647 aa15.1■□□□□ 0.01
RBM39-202ENST00000338163 PNNQ9H307 717 aaKnown RBP15.1■□□□□ 0.01
RBM39-202ENST00000338163 FER1L4A9Z1Z3 1794 aa15.1■□□□□ 0.01
RBM39-202ENST00000338163 TBC1D2Q9BYX2 928 aa15.09■□□□□ 0.01
RBM39-202ENST00000338163 CLTCL1P53675 1640 aa15.09■□□□□ 0.01
RBM39-202ENST00000338163 XRCC6P12956 609 aaKnown RBP eCLIP15.09■□□□□ 0.013e-9■■□□□ 12.4
RBM39-202ENST00000338163 BCL2L13Q9BXK5 485 aa15.09■□□□□ 0.01
RBM39-202ENST00000338163 SENP3Q9H4L4 574 aaPredicted RBP15.09■□□□□ 0.01
RBM39-202ENST00000338163 TNRQ92752 1358 aa15.09■□□□□ 0.01
RBM39-202ENST00000338163 NUTM2DQ5VT03 806 aaPredicted RBP15.08■□□□□ 0
RBM39-202ENST00000338163 SYNMO15061 1565 aa15.08■□□□□ 0
RBM39-202ENST00000338163 ANTXR1Q9H6X2 564 aa15.07■□□□□ 0
RBM39-202ENST00000338163 TRMT2AQ8IZ69 625 aaKnown RBP15.07■□□□□ 0
RBM39-202ENST00000338163 PREX1Q8TCU6 1659 aa15.07■□□□□ 0
RBM39-202ENST00000338163 PDE3AQ14432 1141 aa15.07■□□□□ 0
RBM39-202ENST00000338163 RIMS1Q86UR5 1692 aaKnown RBP15.06■□□□□ 0
RBM39-202ENST00000338163 RRP7AQ9Y3A4 280 aaKnown RBP15.06■□□□□ 0
RBM39-202ENST00000338163 KDM4FA0A1W2PPD8 638 aa15.05■□□□□ 0
RBM39-202ENST00000338163 GLIPR1L2Q4G1C9 344 aa15.05■□□□□ 0
RBM39-202ENST00000338163 ADAMTSL3P82987 1691 aa15.05■□□□□ -0
RBM39-202ENST00000338163 CDCA8Q53HL2 280 aa15.05■□□□□ -0
RBM39-202ENST00000338163 TBC1D32Q96NH3 1257 aa15.05■□□□□ -0
RBM39-202ENST00000338163 TNNT2P45379 298 aaPredicted RBP15.04■□□□□ -0
RBM39-202ENST00000338163 TNNQ9UQP3 1299 aa15.04■□□□□ -0
RBM39-202ENST00000338163 SPATA31D1Q6ZQQ2 1576 aa15.04■□□□□ -0
RBM39-202ENST00000338163 MCM4P33991 863 aa15.03■□□□□ -0
RBM39-202ENST00000338163 PDZRN3Q9UPQ7 1066 aa15.03■□□□□ -0
RBM39-202ENST00000338163 PCDHB15Q9Y5E8 787 aa15.03■□□□□ -0
RBM39-202ENST00000338163 C3P01024 1663 aa15.03■□□□□ -0
RBM39-202ENST00000338163 MFAP1P55081 439 aaKnown RBP15.02■□□□□ -0
RBM39-202ENST00000338163 VSIG10Q8N0Z9 540 aa15.02■□□□□ -0
RBM39-202ENST00000338163 MROH2AA6NES4 1674 aa15.02■□□□□ -0
RBM39-202ENST00000338163 PTPRMP28827 1452 aa15.02■□□□□ -0
RBM39-202ENST00000338163 PMFBP1Q8TBY8 1022 aa15.02□□□□□ -0.01
RBM39-202ENST00000338163 WWC1Q8IX03 1113 aa15.02□□□□□ -0.01
RBM39-202ENST00000338163 RLBP1P12271 317 aa15.01□□□□□ -0.01
RBM39-202ENST00000338163 PKNOX2Q96KN3 472 aa15.01□□□□□ -0.01
RBM39-202ENST00000338163 NLRP1Q9C000 1473 aa15.01□□□□□ -0.01
RBM39-202ENST00000338163 TRAK2O60296 914 aa15.01□□□□□ -0.01
RBM39-202ENST00000338163 HSP90AA1P07900 732 aaKnown RBP15.01□□□□□ -0.01
RBM39-202ENST00000338163 HSP90AA2PQ14568 343 aaPredicted RBP15□□□□□ -0.01
RBM39-202ENST00000338163 PIK3C2GO75747 1445 aa15□□□□□ -0.01
RBM39-202ENST00000338163 ASXL1Q8IXJ9 1541 aa15□□□□□ -0.01
RBM39-202ENST00000338163 ADGRF5Q8IZF2 1346 aa14.99□□□□□ -0.01
RBM39-202ENST00000338163 PIK3C2BO00750 1634 aa14.99□□□□□ -0.01
RBM39-202ENST00000338163 ADGRB3O60242 1522 aa14.98□□□□□ -0.01
RBM39-202ENST00000338163 CLCN1P35523 988 aa14.98□□□□□ -0.01
RBM39-202ENST00000338163 KIF1BO60333 1816 aa14.98□□□□□ -0.01
RBM39-202ENST00000338163 FSD2A1L4K1 749 aa14.97□□□□□ -0.01
RBM39-202ENST00000338163 RARSP54136 660 aaKnown RBP14.97□□□□□ -0.01
RBM39-202ENST00000338163 C22orf23Q9BZE7 217 aa14.97□□□□□ -0.01
RBM39-202ENST00000338163 MYH16Q9H6N6 1097 aa14.97□□□□□ -0.01
RBM39-202ENST00000338163 RWDD1Q9H446 243 aaPredicted RBP14.97□□□□□ -0.01
RBM39-202ENST00000338163 CHMP5Q9NZZ3 219 aa14.97□□□□□ -0.01
RBM39-202ENST00000338163 RPGRIP1LQ68CZ1 1315 aa14.96□□□□□ -0.01
RBM39-202ENST00000338163 A2ML1A8K2U0 1454 aa14.96□□□□□ -0.01
RBM39-202ENST00000338163 VGFO15240 615 aaPredicted RBP14.96□□□□□ -0.01
RBM39-202ENST00000338163 NINLQ9Y2I6 1382 aa14.95□□□□□ -0.02
RBM39-202ENST00000338163 MRE11P49959 708 aa14.95□□□□□ -0.02
RBM39-202ENST00000338163 LAMC1P11047 1609 aa14.95□□□□□ -0.02
RBM39-202ENST00000338163 TMEM131LA2VDJ0 1609 aa14.95□□□□□ -0.02
RBM39-202ENST00000338163 FTSJ3Q8IY81 847 aaKnown RBP14.95□□□□□ -0.02
RBM39-202ENST00000338163 THEMISQ8N1K5 641 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms