RNA–Protein interactions for RNA: ENST00000335626.8

TCF20-201, Transcript of transcription factor 20, humanhuman

TSL 1 (best) BASIC

Gene TCF20, Length 6,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF20-201ENST00000335626 MCTP1Q6DN14 999 aa12.66□□□□□ -0.38
TCF20-201ENST00000335626 CENPJQ9HC77 1338 aaPredicted RBP12.65□□□□□ -0.38
TCF20-201ENST00000335626 CT47A1Q5JQC4 288 aaPredicted RBP12.65□□□□□ -0.38
TCF20-201ENST00000335626 INCENPQ9NQS7 918 aa12.65□□□□□ -0.38
TCF20-201ENST00000335626 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.65□□□□□ -0.382e-6■■■■■ 161.5
TCF20-201ENST00000335626 CHMP5Q9NZZ3 219 aa12.65□□□□□ -0.38
TCF20-201ENST00000335626 SOX12O15370 315 aa12.65□□□□□ -0.38
TCF20-201ENST00000335626 ODF2Q5BJF6 829 aa12.65□□□□□ -0.38
TCF20-201ENST00000335626 AFAP1Q8N556 730 aa12.65□□□□□ -0.38
TCF20-201ENST00000335626 SCAPERQ9BY12 1400 aa12.65□□□□□ -0.38
TCF20-201ENST00000335626 R3HCC1Q9Y3T6 440 aaKnown RBP12.65□□□□□ -0.39
TCF20-201ENST00000335626 WDR97A6NE52 1622 aa12.64□□□□□ -0.39
TCF20-201ENST00000335626 PDE4AP27815 886 aa12.64□□□□□ -0.39
TCF20-201ENST00000335626 LRRFIP1Q32MZ4 808 aaKnown RBP12.64□□□□□ -0.39
TCF20-201ENST00000335626 TRAK1Q9UPV9 953 aa12.64□□□□□ -0.39
TCF20-201ENST00000335626 BICD2Q8TD16 824 aa12.64□□□□□ -0.39
TCF20-201ENST00000335626 TCEAL9Q9UHQ7 104 aa12.64□□□□□ -0.39
TCF20-201ENST00000335626 G3V3G9 751 aa12.64□□□□□ -0.39
TCF20-201ENST00000335626 DCAF8Q5TAQ9 597 aa12.64□□□□□ -0.39
TCF20-201ENST00000335626 ZNF330Q9Y3S2 320 aaPredicted RBP12.64□□□□□ -0.39
TCF20-201ENST00000335626 LMOD3Q0VAK6 560 aa12.63□□□□□ -0.39
TCF20-201ENST00000335626 KIAA0754O94854 1291 aa12.63□□□□□ -0.39
TCF20-201ENST00000335626 CAGE1Q8TC20 777 aa12.63□□□□□ -0.39
TCF20-201ENST00000335626 CCP110O43303 1012 aa12.63□□□□□ -0.39
TCF20-201ENST00000335626 HMGN5P82970 282 aaKnown RBP12.63□□□□□ -0.39
TCF20-201ENST00000335626 ARHGEF11O15085 1522 aa12.63□□□□□ -0.39
TCF20-201ENST00000335626 FANCIQ9NVI1 1328 aa12.63□□□□□ -0.39
TCF20-201ENST00000335626 PTPN23Q9H3S7 1636 aa12.62□□□□□ -0.39
TCF20-201ENST00000335626 EIF4G3O43432 1585 aaKnown RBP12.62□□□□□ -0.39
TCF20-201ENST00000335626 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.62□□□□□ -0.39
TCF20-201ENST00000335626 PBRM1Q86U86 1689 aa12.62□□□□□ -0.39
TCF20-201ENST00000335626 RUFY2Q8WXA3 655 aa12.62□□□□□ -0.39
TCF20-201ENST00000335626 RAPGEF6Q8TEU7 1601 aa12.62□□□□□ -0.39
TCF20-201ENST00000335626 CAMSAP2Q08AD1 1489 aa12.62□□□□□ -0.39
TCF20-201ENST00000335626 REC8O95072 547 aa12.61□□□□□ -0.39
TCF20-201ENST00000335626 MRE11P49959 708 aa12.61□□□□□ -0.39
TCF20-201ENST00000335626 NUCB2P80303 420 aa12.61□□□□□ -0.39
TCF20-201ENST00000335626 HSP90AB2PQ58FF8 381 aa12.61□□□□□ -0.39
TCF20-201ENST00000335626 DYDC1Q8WWB3 177 aa12.61□□□□□ -0.39
TCF20-201ENST00000335626 USP47Q96K76 1375 aa12.61□□□□□ -0.39
TCF20-201ENST00000335626 SLC4A10Q6U841 1118 aa12.61□□□□□ -0.39
TCF20-201ENST00000335626 NAT10Q9H0A0 1025 aaKnown RBP12.61□□□□□ -0.39
TCF20-201ENST00000335626 THOC2Q8NI27 1593 aaKnown RBP12.61□□□□□ -0.39
TCF20-201ENST00000335626 EVC2Q86UK5 1308 aa12.61□□□□□ -0.39
TCF20-201ENST00000335626 FRAT2O75474 233 aaPredicted RBP12.61□□□□□ -0.39
TCF20-201ENST00000335626 FOXD4L6Q3SYB3 417 aaPredicted RBP12.61□□□□□ -0.39
TCF20-201ENST00000335626 FOXD4L3Q6VB84 417 aaPredicted RBP12.61□□□□□ -0.39
TCF20-201ENST00000335626 ZKSCAN1P17029 563 aaPredicted RBP12.6□□□□□ -0.39
TCF20-201ENST00000335626 RILPL2Q969X0 211 aa12.6□□□□□ -0.39
TCF20-201ENST00000335626 CCDC141Q6ZP82 1450 aa12.6□□□□□ -0.39
TCF20-201ENST00000335626 CCDC73Q6ZRK6 1079 aa12.6□□□□□ -0.39
TCF20-201ENST00000335626 NGDNQ8NEJ9 315 aaKnown RBP12.6□□□□□ -0.39
TCF20-201ENST00000335626 HFM1A2PYH4 1435 aa12.59□□□□□ -0.39
TCF20-201ENST00000335626 TAF3Q5VWG9 929 aa12.59□□□□□ -0.39
TCF20-201ENST00000335626 AXDND1Q5T1B0 1012 aaPredicted RBP12.59□□□□□ -0.39
TCF20-201ENST00000335626 DEF6Q9H4E7 631 aa12.59□□□□□ -0.39
TCF20-201ENST00000335626 CLUAP1Q96AJ1 413 aa12.59□□□□□ -0.39
TCF20-201ENST00000335626 ST20-MTHFSA0A0A6YYL1 179 aa12.58□□□□□ -0.39
TCF20-201ENST00000335626 CD109Q6YHK3 1445 aa12.58□□□□□ -0.4
TCF20-201ENST00000335626 CPLX1O14810 134 aa12.58□□□□□ -0.4
TCF20-201ENST00000335626 CT47B1P0C2W7 299 aaPredicted RBP12.58□□□□□ -0.4
TCF20-201ENST00000335626 OFD1O75665 1012 aa12.58□□□□□ -0.4
TCF20-201ENST00000335626 ANKRD18AQ8IVF6 992 aa12.58□□□□□ -0.4
TCF20-201ENST00000335626 NEFHP12036 1026 aa12.58□□□□□ -0.4
TCF20-201ENST00000335626 SLC4A3P48751 1232 aa12.58□□□□□ -0.4
TCF20-201ENST00000335626 AMOTL1Q8IY63 956 aa12.58□□□□□ -0.4
TCF20-201ENST00000335626 ERLIN2O94905 339 aa12.57□□□□□ -0.4
TCF20-201ENST00000335626 OLFM4Q6UX06 510 aa12.57□□□□□ -0.4
TCF20-201ENST00000335626 CNKSR2Q8WXI2 1034 aa12.57□□□□□ -0.4
TCF20-201ENST00000335626 ROCK1Q13464 1354 aa12.57□□□□□ -0.4
TCF20-201ENST00000335626 LETM1O95202 739 aaPredicted RBP12.57□□□□□ -0.4
TCF20-201ENST00000335626 CSB-PGBD3P0DP91 1061 aa12.57□□□□□ -0.4
TCF20-201ENST00000335626 GOLGA6L10A6NI86 522 aa12.56□□□□□ -0.4
TCF20-201ENST00000335626 NASPP49321 788 aaPredicted RBP12.56□□□□□ -0.4
TCF20-201ENST00000335626 DHX8Q14562 1220 aaKnown RBP12.56□□□□□ -0.4
TCF20-201ENST00000335626 KIAA1107Q9UPP5 1409 aa12.56□□□□□ -0.4
TCF20-201ENST00000335626 CGNL1Q0VF96 1302 aa12.56□□□□□ -0.4
TCF20-201ENST00000335626 ANKRD45Q5TZF3 282 aa12.56□□□□□ -0.4
TCF20-201ENST00000335626 RNF20Q5VTR2 975 aa12.56□□□□□ -0.4
TCF20-201ENST00000335626 KIAA0556O60303 1618 aa12.55□□□□□ -0.4
TCF20-201ENST00000335626 ADGRL1O94910 1474 aa12.55□□□□□ -0.4
TCF20-201ENST00000335626 SMARCE1Q969G3 411 aa12.54□□□□□ -0.4
TCF20-201ENST00000335626 CCDC43Q96MW1 224 aaKnown RBP12.54□□□□□ -0.4
TCF20-201ENST00000335626 SMC3Q9UQE7 1217 aa12.54□□□□□ -0.4
TCF20-201ENST00000335626 UGGT2Q9NYU1 1516 aa12.54□□□□□ -0.4
TCF20-201ENST00000335626 EPS15P42566 896 aa12.54□□□□□ -0.4
TCF20-201ENST00000335626 EIF3JO75822 258 aaKnown RBP12.54□□□□□ -0.4
TCF20-201ENST00000335626 EZRP15311 586 aaKnown RBP12.54□□□□□ -0.4
TCF20-201ENST00000335626 ZFYVE27Q5T4F4 411 aa12.54□□□□□ -0.4
TCF20-201ENST00000335626 PDILTQ8N807 584 aa12.54□□□□□ -0.4
TCF20-201ENST00000335626 ANO2Q9NQ90 1003 aa12.54□□□□□ -0.4
TCF20-201ENST00000335626 SAFBQ15424 915 aaKnown RBP eCLIP12.53□□□□□ -0.4
TCF20-201ENST00000335626 CTDP1Q9Y5B0 961 aaPredicted RBP12.53□□□□□ -0.4
TCF20-201ENST00000335626 RABEP1Q15276 862 aa12.53□□□□□ -0.4
TCF20-201ENST00000335626 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.53□□□□□ -0.4
TCF20-201ENST00000335626 NOL10Q9BSC4 688 aaKnown RBP12.53□□□□□ -0.4
TCF20-201ENST00000335626 PANK3Q9H999 370 aa12.53□□□□□ -0.4
TCF20-201ENST00000335626 MINK1Q8N4C8 1332 aaPredicted RBP12.52□□□□□ -0.4
TCF20-201ENST00000335626 TRDNQ13061 729 aa12.52□□□□□ -0.4
TCF20-201ENST00000335626 ERLIN1O75477 346 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms