RNA–Protein interactions for RNA: ENST00000335626.8

TCF20-201, Transcript of transcription factor 20, humanhuman

TSL 1 (best) BASIC

Gene TCF20, Length 6,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF20-201ENST00000335626 NISCHQ9Y2I1 1504 aa18.26■□□□□ 0.51
TCF20-201ENST00000335626 DCAF8L2P0C7V8 631 aa17.5■□□□□ 0.39
TCF20-201ENST00000335626 PELP1Q8IZL8 1130 aaKnown RBP17.27■□□□□ 0.36
TCF20-201ENST00000335626 MYT1Q01538 1121 aa16.54■□□□□ 0.24
TCF20-201ENST00000335626 ERICH6Q7L0X2 663 aa16.52■□□□□ 0.24
TCF20-201ENST00000335626 SHROOM4Q9ULL8 1493 aa16.51■□□□□ 0.23
TCF20-201ENST00000335626 CCER1Q8TC90 406 aaPredicted RBP16.45■□□□□ 0.22
TCF20-201ENST00000335626 SUPT5HO00267 1087 aaKnown RBP16.4■□□□□ 0.22
TCF20-201ENST00000335626 CENPBP07199 599 aaPredicted RBP16.17■□□□□ 0.18
TCF20-201ENST00000335626 APLP2Q06481 763 aa16.02■□□□□ 0.16
TCF20-201ENST00000335626 FAM9AQ8IZU1 332 aaPredicted RBP15.9■□□□□ 0.14
TCF20-201ENST00000335626 NEFLP07196 543 aa15.86■□□□□ 0.13
TCF20-201ENST00000335626 EHMT2Q96KQ7 1210 aa15.83■□□□□ 0.13
TCF20-201ENST00000335626 ZEB1P37275 1124 aaPredicted RBP15.81■□□□□ 0.12
TCF20-201ENST00000335626 YTHDC1Q96MU7 727 aaKnown RBP15.79■□□□□ 0.12
TCF20-201ENST00000335626 ABCC9O60706 1549 aa15.63■□□□□ 0.09
TCF20-201ENST00000335626 PCGF6Q9BYE7 350 aa15.63■□□□□ 0.09
TCF20-201ENST00000335626 DAXXQ9UER7 740 aaPredicted RBP15.62■□□□□ 0.09
TCF20-201ENST00000335626 TTBK1Q5TCY1 1321 aaPredicted RBP15.58■□□□□ 0.08
TCF20-201ENST00000335626 CCDC180Q9P1Z9 1646 aa15.51■□□□□ 0.07
TCF20-201ENST00000335626 TRIM41Q8WV44 630 aa15.35■□□□□ 0.05
TCF20-201ENST00000335626 RTL5Q5HYW3 569 aaPredicted RBP15.32■□□□□ 0.04
TCF20-201ENST00000335626 PABPN1Q86U42 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
TCF20-201ENST00000335626 ZCCHC6Q5VYS8 1495 aaKnown RBP15.19■□□□□ 0.02
TCF20-201ENST00000335626 ZNF316A6NFI3 1004 aaPredicted RBP15.19■□□□□ 0.02
TCF20-201ENST00000335626 ATP1B4Q9UN42 357 aaPredicted RBP15.11■□□□□ 0.01
TCF20-201ENST00000335626 RANGAP1P46060 587 aaPredicted RBP15.07■□□□□ 0
TCF20-201ENST00000335626 SCRIBQ14160 1630 aa15.06■□□□□ 0
TCF20-201ENST00000335626 UBTFP17480 764 aaKnown RBP15.04■□□□□ -0
TCF20-201ENST00000335626 CLSPNQ9HAW4 1339 aa14.99□□□□□ -0.01
TCF20-201ENST00000335626 RB1CC1Q8TDY2 1594 aa14.97□□□□□ -0.01
TCF20-201ENST00000335626 HRCP23327 699 aa14.9□□□□□ -0.02
TCF20-201ENST00000335626 POLR3GLQ9BT43 218 aa14.87□□□□□ -0.03
TCF20-201ENST00000335626 NACADO15069 1562 aa14.86□□□□□ -0.03
TCF20-201ENST00000335626 TRIM26Q12899 539 aaPredicted RBP14.85□□□□□ -0.03
TCF20-201ENST00000335626 GLIPR1L2Q4G1C9 344 aa14.8□□□□□ -0.04
TCF20-201ENST00000335626 CHIC1Q5VXU3 224 aa14.8□□□□□ -0.04
TCF20-201ENST00000335626 CDK11AQ9UQ88 783 aaPredicted RBP14.71□□□□□ -0.05
TCF20-201ENST00000335626 EIF5BO60841 1220 aaKnown RBP14.68□□□□□ -0.06
TCF20-201ENST00000335626 DCAF1Q9Y4B6 1507 aa14.67□□□□□ -0.06
TCF20-201ENST00000335626 ZBTB47Q9UFB7 747 aaPredicted RBP14.66□□□□□ -0.06
TCF20-201ENST00000335626 CNGB1Q14028 1251 aaPredicted RBP14.64□□□□□ -0.07
TCF20-201ENST00000335626 DIEXFQ68CQ4 756 aaKnown RBP14.61□□□□□ -0.07
TCF20-201ENST00000335626 MYT1LQ9UL68 1186 aa14.61□□□□□ -0.07
TCF20-201ENST00000335626 PPARGC1BQ86YN6 1023 aaKnown RBP14.61□□□□□ -0.07
TCF20-201ENST00000335626 SLC4A1APQ9BWU0 796 aaKnown RBP14.6□□□□□ -0.07
TCF20-201ENST00000335626 ANP32BQ92688 251 aaKnown RBP14.6□□□□□ -0.07
TCF20-201ENST00000335626 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
TCF20-201ENST00000335626 ITGAEP38570 1179 aa14.57□□□□□ -0.08
TCF20-201ENST00000335626 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
TCF20-201ENST00000335626 LOC105371045A0A1W2PR82 267 aa14.57□□□□□ -0.08
TCF20-201ENST00000335626 ANP32AP39687 249 aaKnown RBP14.54□□□□□ -0.08
TCF20-201ENST00000335626 BCANQ96GW7 911 aa14.52□□□□□ -0.08
TCF20-201ENST00000335626 GTF3C3Q9Y5Q9 886 aa14.52□□□□□ -0.09
TCF20-201ENST00000335626 MYO15BQ96JP2 1530 aa14.5□□□□□ -0.09
TCF20-201ENST00000335626 ANP32CO43423 234 aa14.39□□□□□ -0.11
TCF20-201ENST00000335626 CANXP27824 592 aaKnown RBP14.39□□□□□ -0.11
TCF20-201ENST00000335626 RSF1Q96T23 1441 aaPredicted RBP14.37□□□□□ -0.11
TCF20-201ENST00000335626 BAZ1BQ9UIG0 1483 aaKnown RBP14.36□□□□□ -0.11
TCF20-201ENST00000335626 FBLN2P98095 1184 aa14.36□□□□□ -0.11
TCF20-201ENST00000335626 BAZ1AQ9NRL2 1556 aaPredicted RBP14.36□□□□□ -0.11
TCF20-201ENST00000335626 ACIN1Q9UKV3 1341 aaKnown RBP14.36□□□□□ -0.11
TCF20-201ENST00000335626 CSRNP3Q8WYN3 585 aa14.3□□□□□ -0.12
TCF20-201ENST00000335626 NPM2Q86SE8 214 aaKnown RBP14.29□□□□□ -0.12
TCF20-201ENST00000335626 HSP90AA1P07900 732 aaKnown RBP14.29□□□□□ -0.12
TCF20-201ENST00000335626 NEFMP07197 916 aa14.26□□□□□ -0.13
TCF20-201ENST00000335626 UPF2Q9HAU5 1272 aaKnown RBP14.25□□□□□ -0.13
TCF20-201ENST00000335626 TNNT2P45379 298 aaPredicted RBP14.24□□□□□ -0.13
TCF20-201ENST00000335626 BCL11AQ9H165 835 aa14.23□□□□□ -0.13
TCF20-201ENST00000335626 FAM50AQ14320 339 aaKnown RBP14.21□□□□□ -0.14
TCF20-201ENST00000335626 CECR2Q9BXF3 1484 aa14.19□□□□□ -0.14
TCF20-201ENST00000335626 TRIM52Q96A61 297 aa14.19□□□□□ -0.14
TCF20-201ENST00000335626 SLC24A1O60721 1099 aa14.18□□□□□ -0.14
TCF20-201ENST00000335626 NEUROD1Q13562 356 aa14.15□□□□□ -0.14
TCF20-201ENST00000335626 SMARCA2P51531 1590 aa14.14□□□□□ -0.15
TCF20-201ENST00000335626 CDK11BP21127 795 aaKnown RBP14.13□□□□□ -0.15
TCF20-201ENST00000335626 P3H3Q8IVL6 736 aa14.13□□□□□ -0.15
TCF20-201ENST00000335626 EEA1Q15075 1411 aa14.09□□□□□ -0.15
TCF20-201ENST00000335626 MROH2BQ7Z745 1585 aa14.09□□□□□ -0.15
TCF20-201ENST00000335626 WRNQ14191 1432 aaPredicted RBP eCLIP14.07□□□□□ -0.16
TCF20-201ENST00000335626 NBR1Q14596 966 aa14.07□□□□□ -0.16
TCF20-201ENST00000335626 ZNF326Q5BKZ1 582 aaKnown RBP14.06□□□□□ -0.16
TCF20-201ENST00000335626 ERCC6Q03468 1493 aa14.06□□□□□ -0.16
TCF20-201ENST00000335626 FKBP8Q14318 412 aa14.04□□□□□ -0.16
TCF20-201ENST00000335626 ANP32EQ9BTT0 268 aa14.04□□□□□ -0.16
TCF20-201ENST00000335626 TRIM44Q96DX7 344 aaPredicted RBP14.03□□□□□ -0.16
TCF20-201ENST00000335626 ARID3CA6NKF2 412 aa14.01□□□□□ -0.17
TCF20-201ENST00000335626 ARXQ96QS3 562 aa14□□□□□ -0.17
TCF20-201ENST00000335626 TOP2AP11388 1531 aaKnown RBP14□□□□□ -0.17
TCF20-201ENST00000335626 CHMP7Q8WUX9 453 aaPredicted RBP14□□□□□ -0.17
TCF20-201ENST00000335626 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
TCF20-201ENST00000335626 WIZO95785 1651 aa13.97□□□□□ -0.17
TCF20-201ENST00000335626 CCDC88BA6NC98 1476 aa13.96□□□□□ -0.17
TCF20-201ENST00000335626 SMARCA4P51532 1647 aa13.96□□□□□ -0.17
TCF20-201ENST00000335626 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.96□□□□□ -0.17
TCF20-201ENST00000335626 GOLGA3Q08378 1498 aa13.96□□□□□ -0.17
TCF20-201ENST00000335626 KIF27Q86VH2 1401 aa13.96□□□□□ -0.18
TCF20-201ENST00000335626 NCLP19338 710 aaKnown RBP13.93□□□□□ -0.18
TCF20-201ENST00000335626 ERICH6BQ5W0A0 696 aa13.93□□□□□ -0.18
TCF20-201ENST00000335626 CCDC136Q96JN2 1154 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms