RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 QTRT2Q9H974 415 aaKnown RBP36.4■■■■□ 3.42
CDKN3-202ENST00000335183 SPATA31E1Q6ZUB1 1445 aa36.4■■■■□ 3.42
CDKN3-202ENST00000335183 NGLY1Q96IV0 654 aa36.39■■■■□ 3.42
CDKN3-202ENST00000335183 STK26Q9P289 416 aa36.38■■■■□ 3.41
CDKN3-202ENST00000335183 ANKRD30BQ9BXX2 1392 aa36.37■■■■□ 3.41
CDKN3-202ENST00000335183 ESCO1Q5FWF5 840 aa36.36■■■■□ 3.41
CDKN3-202ENST00000335183 RBM6P78332 1123 aaKnown RBP36.35■■■■□ 3.41
CDKN3-202ENST00000335183 KNDC1Q76NI1 1749 aa36.34■■■■□ 3.41
CDKN3-202ENST00000335183 RGS12O14924 1447 aa36.34■■■■□ 3.41
CDKN3-202ENST00000335183 COL22A1Q8NFW1 1626 aaPredicted RBP36.33■■■■□ 3.41
CDKN3-202ENST00000335183 WAPLQ7Z5K2 1190 aa36.32■■■■□ 3.4
CDKN3-202ENST00000335183 LRPPRCP42704 1394 aaKnown RBP36.31■■■■□ 3.4
CDKN3-202ENST00000335183 TECPR2O15040 1411 aa36.31■■■■□ 3.4
CDKN3-202ENST00000335183 NPHP3Q7Z494 1330 aa36.31■■■■□ 3.4
CDKN3-202ENST00000335183 TMEM132EQ6IEE7 984 aa36.3■■■■□ 3.4
CDKN3-202ENST00000335183 NUTM2FA1L443 756 aa36.29■■■■□ 3.4
CDKN3-202ENST00000335183 PIK3C2GO75747 1445 aa36.28■■■■□ 3.4
CDKN3-202ENST00000335183 USP21Q9UK80 565 aa36.26■■■■□ 3.4
CDKN3-202ENST00000335183 PLEKHH1Q9ULM0 1364 aa36.26■■■■□ 3.39
CDKN3-202ENST00000335183 PXDNQ92626 1479 aa36.25■■■■□ 3.39
CDKN3-202ENST00000335183 XPCQ01831 940 aaPredicted RBP36.25■■■■□ 3.39
CDKN3-202ENST00000335183 ABCC11Q96J66 1382 aa36.25■■■■□ 3.39
CDKN3-202ENST00000335183 FOXO3O43524 673 aa36.24■■■■□ 3.39
CDKN3-202ENST00000335183 FMN2Q9NZ56 1722 aa36.23■■■■□ 3.39
CDKN3-202ENST00000335183 MARF1Q9Y4F3 1742 aaKnown RBP36.23■■■■□ 3.39
CDKN3-202ENST00000335183 YTHDC2Q9H6S0 1430 aaKnown RBP36.21■■■■□ 3.39
CDKN3-202ENST00000335183 MYOM2P54296 1465 aa36.2■■■■□ 3.39
CDKN3-202ENST00000335183 TRPC5Q9UL62 973 aaPredicted RBP36.2■■■■□ 3.39
CDKN3-202ENST00000335183 FNBP4Q8N3X1 1017 aaPredicted RBP36.17■■■■□ 3.38
CDKN3-202ENST00000335183 KIF1AQ12756 1690 aa36.16■■■■□ 3.38
CDKN3-202ENST00000335183 RGPD8O14715 1765 aaPredicted RBP36.15■■■■□ 3.38
CDKN3-202ENST00000335183 ACIN1Q9UKV3 1341 aaKnown RBP36.15■■■■□ 3.38
CDKN3-202ENST00000335183 ATRNO75882 1429 aa36.12■■■■□ 3.37
CDKN3-202ENST00000335183 C14orf93Q9H972 538 aaKnown RBP36.11■■■■□ 3.37
CDKN3-202ENST00000335183 CFAP70Q5T0N1 1121 aa36.09■■■■□ 3.37
CDKN3-202ENST00000335183 NRXN1Q9ULB1 1477 aa36.09■■■■□ 3.37
CDKN3-202ENST00000335183 DHX57Q6P158 1386 aaKnown RBP36.08■■■■□ 3.37
CDKN3-202ENST00000335183 ATAD2Q6PL18 1390 aa36.07■■■■□ 3.36
CDKN3-202ENST00000335183 SIRT1Q96EB6 747 aa36.07■■■■□ 3.36
CDKN3-202ENST00000335183 BCL9LQ86UU0 1499 aa36.05■■■■□ 3.36
CDKN3-202ENST00000335183 RAB3GAP2Q9H2M9 1393 aa36.04■■■■□ 3.36
CDKN3-202ENST00000335183 SPATA31A3Q5VYP0 1347 aa36.04■■■■□ 3.36
CDKN3-202ENST00000335183 SAFB2Q14151 953 aaKnown RBP eCLIP36.03■■■■□ 3.36
CDKN3-202ENST00000335183 KRT28Q7Z3Y7 464 aa36.03■■■■□ 3.36
CDKN3-202ENST00000335183 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.01■■■■□ 3.36
CDKN3-202ENST00000335183 PRAM1Q96QH2 718 aa35.99■■■■□ 3.35
CDKN3-202ENST00000335183 PHF8Q9UPP1 1060 aa35.99■■■■□ 3.35
CDKN3-202ENST00000335183 USP32Q8NFA0 1604 aa35.97■■■■□ 3.35
CDKN3-202ENST00000335183 GJD4Q96KN9 370 aaPredicted RBP35.95■■■■□ 3.35
CDKN3-202ENST00000335183 POGKQ9P215 609 aa35.95■■■■□ 3.35
CDKN3-202ENST00000335183 DLC1Q96QB1 1528 aa35.94■■■■□ 3.34
CDKN3-202ENST00000335183 TNS3Q68CZ2 1445 aa35.94■■■■□ 3.34
CDKN3-202ENST00000335183 PSME1Q06323 249 aa35.94■■■■□ 3.34
CDKN3-202ENST00000335183 PLEKHG5O94827 1062 aa35.93■■■■□ 3.34
CDKN3-202ENST00000335183 HAP1P54257 671 aaPredicted RBP35.93■■■■□ 3.34
CDKN3-202ENST00000335183 SLIT2O94813 1529 aa35.92■■■■□ 3.34
CDKN3-202ENST00000335183 UNC5CLQ8IV45 518 aa35.91■■■■□ 3.34
CDKN3-202ENST00000335183 LMOD2Q6P5Q4 547 aa35.89■■■■□ 3.34
CDKN3-202ENST00000335183 ADGRB1O14514 1584 aa35.89■■■■□ 3.34
CDKN3-202ENST00000335183 GLI3P10071 1580 aa35.89■■■■□ 3.34
CDKN3-202ENST00000335183 ABCA3Q99758 1704 aa35.88■■■■□ 3.33
CDKN3-202ENST00000335183 ADGRB2O60241 1585 aa35.87■■■■□ 3.33
CDKN3-202ENST00000335183 CABLES1Q8TDN4 633 aa35.87■■■■□ 3.33
CDKN3-202ENST00000335183 KDM2AQ9Y2K7 1162 aa35.87■■■■□ 3.33
CDKN3-202ENST00000335183 RALGAPBQ86X10 1494 aa35.86■■■■□ 3.33
CDKN3-202ENST00000335183 PMFBP1Q8TBY8 1022 aa35.86■■■■□ 3.33
CDKN3-202ENST00000335183 TRAK1Q9UPV9 953 aa35.86■■■■□ 3.33
CDKN3-202ENST00000335183 PLCH1Q4KWH8 1693 aa35.86■■■■□ 3.33
CDKN3-202ENST00000335183 SBNO1A3KN83 1393 aa35.85■■■■□ 3.33
CDKN3-202ENST00000335183 ANKARQ7Z5J8 1434 aa35.84■■■■□ 3.33
CDKN3-202ENST00000335183 DCAF11Q8TEB1 546 aa35.82■■■■□ 3.32
CDKN3-202ENST00000335183 HIRIP3Q9BW71 556 aaPredicted RBP35.82■■■■□ 3.32
CDKN3-202ENST00000335183 BRWD3Q6RI45 1802 aa35.82■■■■□ 3.32
CDKN3-202ENST00000335183 ARHGEF10O15013 1369 aa35.81■■■■□ 3.32
CDKN3-202ENST00000335183 NWD2Q9ULI1 1742 aa35.81■■■■□ 3.32
CDKN3-202ENST00000335183 MINK1Q8N4C8 1332 aaPredicted RBP35.8■■■■□ 3.32
CDKN3-202ENST00000335183 TRPM3Q9HCF6 1732 aaPredicted RBP35.77■■■■□ 3.32
CDKN3-202ENST00000335183 CCDC125Q86Z20 511 aa35.76■■■■□ 3.32
CDKN3-202ENST00000335183 CCDC9Q9Y3X0 531 aaKnown RBP35.74■■■■□ 3.31
CDKN3-202ENST00000335183 EIF3AQ14152 1382 aaKnown RBP35.73■■■■□ 3.31
CDKN3-202ENST00000335183 TULP4Q9NRJ4 1543 aa35.73■■■■□ 3.31
CDKN3-202ENST00000335183 VPS72Q15906 364 aa35.72■■■■□ 3.31
CDKN3-202ENST00000335183 EP400Q96L91 3159 aa35.71■■■■□ 3.31
CDKN3-202ENST00000335183 ZRANB1Q9UGI0 708 aa35.71■■■■□ 3.31
CDKN3-202ENST00000335183 ALS2Q96Q42 1657 aa35.71■■■■□ 3.31
CDKN3-202ENST00000335183 GPRASP1Q5JY77 1395 aa35.7■■■■□ 3.31
CDKN3-202ENST00000335183 ARHGEF28Q8N1W1 1705 aaKnown RBP35.7■■■■□ 3.31
CDKN3-202ENST00000335183 PRR36Q9H6K5 1346 aa35.7■■■■□ 3.31
CDKN3-202ENST00000335183 SEPT12Q8IYM1 358 aa35.69■■■■□ 3.3
CDKN3-202ENST00000335183 WASLO00401 505 aaPredicted RBP35.68■■■■□ 3.3
CDKN3-202ENST00000335183 FAM83GA6ND36 823 aa35.67■■■■□ 3.3
CDKN3-202ENST00000335183 STAC3Q96MF2 364 aa35.67■■■■□ 3.3
CDKN3-202ENST00000335183 NRAPQ86VF7 1730 aa35.66■■■■□ 3.3
CDKN3-202ENST00000335183 ITSN1Q15811 1721 aa35.65■■■■□ 3.3
CDKN3-202ENST00000335183 BLMP54132 1417 aaPredicted RBP35.65■■■■□ 3.3
CDKN3-202ENST00000335183 HRCP23327 699 aa35.63■■■■□ 3.29
CDKN3-202ENST00000335183 NGDNQ8NEJ9 315 aaKnown RBP35.63■■■■□ 3.29
CDKN3-202ENST00000335183 COL14A1Q05707 1796 aaKnown RBP35.62■■■■□ 3.29
CDKN3-202ENST00000335183 A0A0G2JS52 829 aa35.59■■■■□ 3.29
CDKN3-202ENST00000335183 PAK3O75914 559 aaPredicted RBP35.59■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms