RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 IGHDP01880 384 aa16.01■□□□□ 0.15
VPS33B-201ENST00000333371 TRAK1Q9UPV9 953 aa16.01■□□□□ 0.15
VPS33B-201ENST00000333371 IL27Q8NEV9 243 aa16.01■□□□□ 0.15
VPS33B-201ENST00000333371 DDRGK1Q96HY6 314 aa16.01■□□□□ 0.15
VPS33B-201ENST00000333371 PPLO60437 1756 aa16■□□□□ 0.15
VPS33B-201ENST00000333371 SLC24A1O60721 1099 aa16■□□□□ 0.15
VPS33B-201ENST00000333371 PANK1Q8TE04 598 aa16■□□□□ 0.15
VPS33B-201ENST00000333371 PPM1GO15355 546 aaPredicted RBP15.99■□□□□ 0.15
VPS33B-201ENST00000333371 SENP3Q9H4L4 574 aaPredicted RBP15.99■□□□□ 0.15
VPS33B-201ENST00000333371 NRXN1Q9ULB1 1477 aa15.99■□□□□ 0.15
VPS33B-201ENST00000333371 DIP2BQ9P265 1576 aa15.99■□□□□ 0.15
VPS33B-201ENST00000333371 ZC3H13Q5T200 1668 aaKnown RBP15.99■□□□□ 0.15
VPS33B-201ENST00000333371 E9PSI1 815 aa15.99■□□□□ 0.15
VPS33B-201ENST00000333371 TMEM132EQ6IEE7 984 aa15.99■□□□□ 0.15
VPS33B-201ENST00000333371 SLC12A5Q9H2X9 1139 aa15.99■□□□□ 0.15
VPS33B-201ENST00000333371 SIGLEC1Q9BZZ2 1709 aa15.99■□□□□ 0.15
VPS33B-201ENST00000333371 COG6Q9Y2V7 657 aa15.98■□□□□ 0.15
VPS33B-201ENST00000333371 RPGRIP1LQ68CZ1 1315 aa15.98■□□□□ 0.15
VPS33B-201ENST00000333371 WWC1Q8IX03 1113 aa15.98■□□□□ 0.15
VPS33B-201ENST00000333371 FRAT1Q92837 279 aaPredicted RBP15.97■□□□□ 0.15
VPS33B-201ENST00000333371 RTN4Q9NQC3 1192 aaKnown RBP15.97■□□□□ 0.15
VPS33B-201ENST00000333371 TNNQ9UQP3 1299 aa15.97■□□□□ 0.15
VPS33B-201ENST00000333371 NFKBIBQ15653 356 aa15.97■□□□□ 0.15
VPS33B-201ENST00000333371 NUTM2DQ5VT03 806 aaPredicted RBP15.97■□□□□ 0.15
VPS33B-201ENST00000333371 NSD3Q9BZ95 1437 aa15.96■□□□□ 0.15
VPS33B-201ENST00000333371 CANXP27824 592 aaKnown RBP15.96■□□□□ 0.15
VPS33B-201ENST00000333371 SETBP1Q9Y6X0 1596 aa15.95■□□□□ 0.14
VPS33B-201ENST00000333371 BCL2L13Q9BXK5 485 aa15.95■□□□□ 0.14
VPS33B-201ENST00000333371 USP35Q9P2H5 1018 aa15.95■□□□□ 0.14
VPS33B-201ENST00000333371 DAXXQ9UER7 740 aaPredicted RBP15.95■□□□□ 0.14
VPS33B-201ENST00000333371 CENPJQ9HC77 1338 aaPredicted RBP15.95■□□□□ 0.14
VPS33B-201ENST00000333371 MORC1Q86VD1 984 aa15.95■□□□□ 0.14
VPS33B-201ENST00000333371 ARHGAP31Q2M1Z3 1444 aa15.94■□□□□ 0.14
VPS33B-201ENST00000333371 C14orf93Q9H972 538 aaKnown RBP15.94■□□□□ 0.14
VPS33B-201ENST00000333371 PIK3C2BO00750 1634 aa15.94■□□□□ 0.14
VPS33B-201ENST00000333371 SHPRHQ149N8 1683 aa15.94■□□□□ 0.14
VPS33B-201ENST00000333371 SEC24BO95487 1268 aa15.92■□□□□ 0.14
VPS33B-201ENST00000333371 MYO3AQ8NEV4 1616 aa15.92■□□□□ 0.14
VPS33B-201ENST00000333371 VGFO15240 615 aaPredicted RBP15.92■□□□□ 0.14
VPS33B-201ENST00000333371 TCP11L2Q8N4U5 519 aa15.92■□□□□ 0.14
VPS33B-201ENST00000333371 POLR3AO14802 1390 aaPredicted RBP15.91■□□□□ 0.14
VPS33B-201ENST00000333371 IDI1Q13907 227 aa15.91■□□□□ 0.14
VPS33B-201ENST00000333371 RLBP1P12271 317 aa15.91■□□□□ 0.14
VPS33B-201ENST00000333371 CLUAP1Q96AJ1 413 aa15.91■□□□□ 0.14
VPS33B-201ENST00000333371 SLC52A1Q9NWF4 448 aa15.91■□□□□ 0.14
VPS33B-201ENST00000333371 QRICH2Q9H0J4 1663 aa15.91■□□□□ 0.14
VPS33B-201ENST00000333371 MTHFSP49914 203 aa15.9■□□□□ 0.14
VPS33B-201ENST00000333371 PREX1Q8TCU6 1659 aa15.9■□□□□ 0.14
VPS33B-201ENST00000333371 SBNO2Q9Y2G9 1366 aa15.89■□□□□ 0.13
VPS33B-201ENST00000333371 PRKCSHP14314 528 aaPredicted RBP15.89■□□□□ 0.13
VPS33B-201ENST00000333371 SAFB2Q14151 953 aaKnown RBP eCLIP15.89■□□□□ 0.13
VPS33B-201ENST00000333371 NEXMIFQ5QGS0 1516 aa15.89■□□□□ 0.13
VPS33B-201ENST00000333371 VIRMAQ69YN4 1812 aaKnown RBP15.89■□□□□ 0.13
VPS33B-201ENST00000333371 USP19O94966 1318 aa15.89■□□□□ 0.13
VPS33B-201ENST00000333371 FRAT2O75474 233 aaPredicted RBP15.88■□□□□ 0.13
VPS33B-201ENST00000333371 CGNL1Q0VF96 1302 aa15.88■□□□□ 0.13
VPS33B-201ENST00000333371 RARSP54136 660 aaKnown RBP15.88■□□□□ 0.13
VPS33B-201ENST00000333371 PDE3AQ14432 1141 aa15.88■□□□□ 0.13
VPS33B-201ENST00000333371 ADGRB1O14514 1584 aa15.88■□□□□ 0.13
VPS33B-201ENST00000333371 MYO5BQ9ULV0 1848 aa15.88■□□□□ 0.13
VPS33B-201ENST00000333371 RUNDC1Q96C34 613 aa15.87■□□□□ 0.13
VPS33B-201ENST00000333371 PCDHB15Q9Y5E8 787 aa15.87■□□□□ 0.13
VPS33B-201ENST00000333371 GSE1Q14687 1217 aa15.86■□□□□ 0.13
VPS33B-201ENST00000333371 BRPF3Q9ULD4 1205 aa15.86■□□□□ 0.13
VPS33B-201ENST00000333371 STAG3Q9UJ98 1225 aa15.85■□□□□ 0.13
VPS33B-201ENST00000333371 FBXO31Q5XUX0 539 aaPredicted RBP15.84■□□□□ 0.13
VPS33B-201ENST00000333371 CABP2Q9NPB3 220 aa15.84■□□□□ 0.13
VPS33B-201ENST00000333371 IQSEC2Q5JU85 1478 aa15.83■□□□□ 0.13
VPS33B-201ENST00000333371 MLECQ14165 292 aa15.83■□□□□ 0.13
VPS33B-201ENST00000333371 REREQ9P2R6 1566 aa15.83■□□□□ 0.12
VPS33B-201ENST00000333371 TMEM131LA2VDJ0 1609 aa15.83■□□□□ 0.12
VPS33B-201ENST00000333371 U2AF1L5P0DN76 240 aaPredicted RBP15.82■□□□□ 0.12
VPS33B-201ENST00000333371 U2AF1Q01081 240 aaKnown RBP eCLIP15.82■□□□□ 0.12
VPS33B-201ENST00000333371 NGEFQ8N5V2 710 aa15.82■□□□□ 0.12
VPS33B-201ENST00000333371 CLTCQ00610 1675 aaKnown RBP15.82■□□□□ 0.12
VPS33B-201ENST00000333371 AGLP35573 1532 aa15.82■□□□□ 0.12
VPS33B-201ENST00000333371 TSR2Q969E8 191 aaKnown RBP15.81■□□□□ 0.12
VPS33B-201ENST00000333371 PHF23Q9BUL5 403 aaPredicted RBP15.81■□□□□ 0.12
VPS33B-201ENST00000333371 ARHGEF28Q8N1W1 1705 aaKnown RBP15.81■□□□□ 0.12
VPS33B-201ENST00000333371 PPP6R1Q9UPN7 881 aa15.81■□□□□ 0.12
VPS33B-201ENST00000333371 KIF13AQ9H1H9 1805 aa15.81■□□□□ 0.12
VPS33B-201ENST00000333371 ZFYVE9O95405 1425 aa15.81■□□□□ 0.12
VPS33B-201ENST00000333371 STK26Q9P289 416 aa15.81■□□□□ 0.12
VPS33B-201ENST00000333371 EVC2Q86UK5 1308 aa15.8■□□□□ 0.12
VPS33B-201ENST00000333371 SLKQ9H2G2 1235 aaPredicted RBP15.8■□□□□ 0.12
VPS33B-201ENST00000333371 PDZRN3Q9UPQ7 1066 aa15.8■□□□□ 0.12
VPS33B-201ENST00000333371 MAPK8IP3Q9UPT6 1336 aa15.79■□□□□ 0.12
VPS33B-201ENST00000333371 TULP4Q9NRJ4 1543 aa15.79■□□□□ 0.12
VPS33B-201ENST00000333371 CFAP53Q96M91 514 aa15.78■□□□□ 0.12
VPS33B-201ENST00000333371 NINLQ9Y2I6 1382 aa15.78■□□□□ 0.12
VPS33B-201ENST00000333371 WDR63Q8IWG1 891 aa15.78■□□□□ 0.12
VPS33B-201ENST00000333371 ESF1Q9H501 851 aaKnown RBP15.78■□□□□ 0.12
VPS33B-201ENST00000333371 NLRP1Q9C000 1473 aa15.78■□□□□ 0.12
VPS33B-201ENST00000333371 GGNBP2Q9H3C7 697 aa15.77■□□□□ 0.12
VPS33B-201ENST00000333371 U2SURPO15042 1029 aaKnown RBP15.77■□□□□ 0.11
VPS33B-201ENST00000333371 ARHGEF40Q8TER5 1519 aa15.76■□□□□ 0.11
VPS33B-201ENST00000333371 PMFBP1Q8TBY8 1022 aa15.75■□□□□ 0.11
VPS33B-201ENST00000333371 ANO8Q9HCE9 1232 aaPredicted RBP15.75■□□□□ 0.11
VPS33B-201ENST00000333371 USP32Q8NFA0 1604 aa15.74■□□□□ 0.11
VPS33B-201ENST00000333371 ANKRD36BQ8N2N9 1353 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms