RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 SENP3Q9H4L4 574 aaPredicted RBP26.79■■□□□ 1.88
LINC01006-201ENST00000333319 TULP4Q9NRJ4 1543 aa26.78■■□□□ 1.88
LINC01006-201ENST00000333319 CGNL1Q0VF96 1302 aa26.78■■□□□ 1.88
LINC01006-201ENST00000333319 NKTRP30414 1462 aaKnown RBP26.78■■□□□ 1.88
LINC01006-201ENST00000333319 SAFB2Q14151 953 aaKnown RBP eCLIP26.77■■□□□ 1.88
LINC01006-201ENST00000333319 NOP58Q9Y2X3 529 aaKnown RBP26.77■■□□□ 1.88
LINC01006-201ENST00000333319 DMRT2Q9Y5R5 561 aa26.77■■□□□ 1.88
LINC01006-201ENST00000333319 ZFYVE9O95405 1425 aa26.76■■□□□ 1.87
LINC01006-201ENST00000333319 USP32Q8NFA0 1604 aa26.76■■□□□ 1.87
LINC01006-201ENST00000333319 CABP2Q9NPB3 220 aa26.76■■□□□ 1.87
LINC01006-201ENST00000333319 MS4A1P11836 297 aa26.76■■□□□ 1.87
LINC01006-201ENST00000333319 MYO5BQ9ULV0 1848 aa26.75■■□□□ 1.87
LINC01006-201ENST00000333319 STK26Q9P289 416 aa26.75■■□□□ 1.87
LINC01006-201ENST00000333319 SHPRHQ149N8 1683 aa26.75■■□□□ 1.87
LINC01006-201ENST00000333319 PDE4AP27815 886 aa26.74■■□□□ 1.87
LINC01006-201ENST00000333319 PREX1Q8TCU6 1659 aa26.74■■□□□ 1.87
LINC01006-201ENST00000333319 ANKRD36BQ8N2N9 1353 aa26.74■■□□□ 1.87
LINC01006-201ENST00000333319 IPO9Q96P70 1041 aaKnown RBP26.73■■□□□ 1.87
LINC01006-201ENST00000333319 MTHFSP49914 203 aa26.72■■□□□ 1.87
LINC01006-201ENST00000333319 WWC1Q8IX03 1113 aa26.72■■□□□ 1.87
LINC01006-201ENST00000333319 TMEM131LA2VDJ0 1609 aa26.71■■□□□ 1.87
LINC01006-201ENST00000333319 FAM69CQ0P6D2 419 aa26.7■■□□□ 1.87
LINC01006-201ENST00000333319 SKAP1Q86WV1 359 aa26.7■■□□□ 1.87
LINC01006-201ENST00000333319 BCAR3O75815 825 aa26.7■■□□□ 1.86
LINC01006-201ENST00000333319 PAK3O75914 559 aaPredicted RBP26.7■■□□□ 1.86
LINC01006-201ENST00000333319 FBXO31Q5XUX0 539 aaPredicted RBP26.7■■□□□ 1.86
LINC01006-201ENST00000333319 BACH2Q9BYV9 841 aa26.7■■□□□ 1.86
LINC01006-201ENST00000333319 KDM2BQ8NHM5 1336 aa26.69■■□□□ 1.86
LINC01006-201ENST00000333319 RUNDC1Q96C34 613 aa26.69■■□□□ 1.86
LINC01006-201ENST00000333319 NEUROD2Q15784 382 aa26.68■■□□□ 1.86
LINC01006-201ENST00000333319 CFAP53Q96M91 514 aa26.68■■□□□ 1.86
LINC01006-201ENST00000333319 SRPK2P78362 688 aaKnown RBP26.67■■□□□ 1.86
LINC01006-201ENST00000333319 NSD2O96028 1365 aa26.66■■□□□ 1.86
LINC01006-201ENST00000333319 CENPQQ7L2Z9 268 aaPredicted RBP26.66■■□□□ 1.86
LINC01006-201ENST00000333319 RRP7AQ9Y3A4 280 aaKnown RBP26.66■■□□□ 1.86
LINC01006-201ENST00000333319 TCP11L2Q8N4U5 519 aa26.65■■□□□ 1.86
LINC01006-201ENST00000333319 NPM2Q86SE8 214 aaKnown RBP26.64■■□□□ 1.86
LINC01006-201ENST00000333319 PRAM1Q96QH2 718 aa26.62■■□□□ 1.85
LINC01006-201ENST00000333319 ZBTB47Q9UFB7 747 aaPredicted RBP26.62■■□□□ 1.85
LINC01006-201ENST00000333319 PTPRMP28827 1452 aa26.62■■□□□ 1.85
LINC01006-201ENST00000333319 MINK1Q8N4C8 1332 aaPredicted RBP26.62■■□□□ 1.85
LINC01006-201ENST00000333319 A0A1W2PP64 1363 aa26.62■■□□□ 1.85
LINC01006-201ENST00000333319 IQSEC2Q5JU85 1478 aa26.61■■□□□ 1.85
LINC01006-201ENST00000333319 POGKQ9P215 609 aa26.61■■□□□ 1.85
LINC01006-201ENST00000333319 YTHDC2Q9H6S0 1430 aaKnown RBP26.61■■□□□ 1.85
LINC01006-201ENST00000333319 STAG3Q9UJ98 1225 aa26.6■■□□□ 1.85
LINC01006-201ENST00000333319 NINLQ9Y2I6 1382 aa26.6■■□□□ 1.85
LINC01006-201ENST00000333319 TSPOAP1O95153 1857 aa26.6■■□□□ 1.85
LINC01006-201ENST00000333319 DIP2BQ9P265 1576 aa26.6■■□□□ 1.85
LINC01006-201ENST00000333319 ABCC11Q96J66 1382 aa26.59■■□□□ 1.85
LINC01006-201ENST00000333319 PHF23Q9BUL5 403 aaPredicted RBP26.58■■□□□ 1.85
LINC01006-201ENST00000333319 RIMBP3CA6NJZ7 1639 aa26.57■■□□□ 1.84
LINC01006-201ENST00000333319 RIMBP3BA6NNM3 1639 aa26.57■■□□□ 1.84
LINC01006-201ENST00000333319 RIMBP3Q9UFD9 1639 aa26.57■■□□□ 1.84
LINC01006-201ENST00000333319 ATAD2Q6PL18 1390 aa26.57■■□□□ 1.84
LINC01006-201ENST00000333319 U2AF1L5P0DN76 240 aaPredicted RBP26.56■■□□□ 1.84
LINC01006-201ENST00000333319 U2AF1Q01081 240 aaKnown RBP eCLIP26.56■■□□□ 1.84
LINC01006-201ENST00000333319 GGNBP2Q9H3C7 697 aa26.56■■□□□ 1.84
LINC01006-201ENST00000333319 WDR63Q8IWG1 891 aa26.55■■□□□ 1.84
LINC01006-201ENST00000333319 ALKQ9UM73 1620 aa26.55■■□□□ 1.84
LINC01006-201ENST00000333319 TERF2IPQ9NYB0 399 aa26.54■■□□□ 1.84
LINC01006-201ENST00000333319 PDE3AQ14432 1141 aa26.54■■□□□ 1.84
LINC01006-201ENST00000333319 CANXP27824 592 aaKnown RBP26.53■■□□□ 1.84
LINC01006-201ENST00000333319 CCDC27Q2M243 656 aa26.53■■□□□ 1.84
LINC01006-201ENST00000333319 PPP6R1Q9UPN7 881 aa26.51■■□□□ 1.84
LINC01006-201ENST00000333319 CLTCQ00610 1675 aaKnown RBP26.5■■□□□ 1.83
LINC01006-201ENST00000333319 FYB1O15117 783 aa26.5■■□□□ 1.83
LINC01006-201ENST00000333319 REREQ9P2R6 1566 aa26.5■■□□□ 1.83
LINC01006-201ENST00000333319 CDK19Q9BWU1 502 aa26.5■■□□□ 1.83
LINC01006-201ENST00000333319 AGLP35573 1532 aa26.5■■□□□ 1.83
LINC01006-201ENST00000333319 CD163L1Q9NR16 1453 aa26.49■■□□□ 1.83
LINC01006-201ENST00000333319 RARSP54136 660 aaKnown RBP26.49■■□□□ 1.83
LINC01006-201ENST00000333319 PANK1Q8TE04 598 aa26.49■■□□□ 1.83
LINC01006-201ENST00000333319 FRAT1Q92837 279 aaPredicted RBP26.49■■□□□ 1.83
LINC01006-201ENST00000333319 MLECQ14165 292 aa26.48■■□□□ 1.83
LINC01006-201ENST00000333319 NCBP3Q53F19 620 aaKnown RBP26.47■■□□□ 1.83
LINC01006-201ENST00000333319 COG6Q9Y2V7 657 aa26.47■■□□□ 1.83
LINC01006-201ENST00000333319 U2SURPO15042 1029 aaKnown RBP26.46■■□□□ 1.83
LINC01006-201ENST00000333319 NBR1Q14596 966 aa26.46■■□□□ 1.83
LINC01006-201ENST00000333319 HDGFL2Q7Z4V5 671 aaPredicted RBP26.46■■□□□ 1.83
LINC01006-201ENST00000333319 CABP1Q9NZU7 370 aa26.45■■□□□ 1.83
LINC01006-201ENST00000333319 A2ML1A8K2U0 1454 aa26.45■■□□□ 1.82
LINC01006-201ENST00000333319 ARHGEF40Q8TER5 1519 aa26.45■■□□□ 1.82
LINC01006-201ENST00000333319 ADGRB2O60241 1585 aa26.44■■□□□ 1.82
LINC01006-201ENST00000333319 RGS3P49796 1198 aa26.44■■□□□ 1.82
LINC01006-201ENST00000333319 MYH16Q9H6N6 1097 aa26.44■■□□□ 1.82
LINC01006-201ENST00000333319 ANKRD26Q9UPS8 1709 aa26.43■■□□□ 1.82
LINC01006-201ENST00000333319 MED14O60244 1454 aa26.43■■□□□ 1.82
LINC01006-201ENST00000333319 NLRP1Q9C000 1473 aa26.43■■□□□ 1.82
LINC01006-201ENST00000333319 IGHDP01880 384 aa26.43■■□□□ 1.82
LINC01006-201ENST00000333319 CLUAP1Q96AJ1 413 aa26.43■■□□□ 1.82
LINC01006-201ENST00000333319 WAPLQ7Z5K2 1190 aa26.42■■□□□ 1.82
LINC01006-201ENST00000333319 SPATA31D1Q6ZQQ2 1576 aa26.42■■□□□ 1.82
LINC01006-201ENST00000333319 COL3A1P02461 1466 aaPredicted RBP26.42■■□□□ 1.82
LINC01006-201ENST00000333319 RIMS2Q9UQ26 1411 aa26.42■■□□□ 1.82
LINC01006-201ENST00000333319 PLEKHF1Q96S99 279 aa26.41■■□□□ 1.82
LINC01006-201ENST00000333319 FAM161AQ3B820 660 aa26.41■■□□□ 1.82
LINC01006-201ENST00000333319 BCL2L13Q9BXK5 485 aa26.41■■□□□ 1.82
LINC01006-201ENST00000333319 C8orf34Q49A92 452 aa26.39■■□□□ 1.81
LINC01006-201ENST00000333319 TMPOP42166 694 aaKnown RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms