RNA–Protein interactions for RNA: ENST00000332687.10

RLIM-201, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLIM, Length 8,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-201ENST00000332687 MPHOSPH6Q99547 160 aaKnown RBP6.03□□□□□ -1.44
RLIM-201ENST00000332687 SUPT16HQ9Y5B9 1047 aaKnown RBP6.03□□□□□ -1.44
RLIM-201ENST00000332687 TOP2BQ02880 1626 aa6.03□□□□□ -1.44
RLIM-201ENST00000332687 CT47B1P0C2W7 299 aaPredicted RBP6.03□□□□□ -1.44
RLIM-201ENST00000332687 CCDC30Q5VVM6 783 aa6.03□□□□□ -1.44
RLIM-201ENST00000332687 IL27Q8NEV9 243 aa6.03□□□□□ -1.44
RLIM-201ENST00000332687 TOPBP1Q92547 1522 aa6.02□□□□□ -1.45
RLIM-201ENST00000332687 RALYLQ86SE5 291 aaKnown RBP6.02□□□□□ -1.45
RLIM-201ENST00000332687 ZNF710Q8N1W2 664 aa6.02□□□□□ -1.45
RLIM-201ENST00000332687 NLRP2Q9NX02 1062 aa6.02□□□□□ -1.45
RLIM-201ENST00000332687 TROQ12816 1431 aaPredicted RBP6.02□□□□□ -1.45
RLIM-201ENST00000332687 GNAI3P08754 354 aa6.02□□□□□ -1.45
RLIM-201ENST00000332687 PSMA5P28066 241 aa6.02□□□□□ -1.45
RLIM-201ENST00000332687 ODF2Q5BJF6 829 aa6.02□□□□□ -1.45
RLIM-201ENST00000332687 RIC3Q7Z5B4 369 aa6.02□□□□□ -1.45
RLIM-201ENST00000332687 HSP90AA2PQ14568 343 aaPredicted RBP6.01□□□□□ -1.45
RLIM-201ENST00000332687 KIF7Q2M1P5 1343 aa6.01□□□□□ -1.45
RLIM-201ENST00000332687 SKOR2Q2VWA4 1001 aaPredicted RBP6.01□□□□□ -1.45
RLIM-201ENST00000332687 HSP90AB3PQ58FF7 597 aa6.01□□□□□ -1.45
RLIM-201ENST00000332687 TOM1O60784 492 aa6.01□□□□□ -1.45
RLIM-201ENST00000332687 GPS2Q13227 327 aa6.01□□□□□ -1.45
RLIM-201ENST00000332687 ZNF428Q96B54 188 aa6.01□□□□□ -1.45
RLIM-201ENST00000332687 NCBP3Q53F19 620 aaKnown RBP6.01□□□□□ -1.45
RLIM-201ENST00000332687 ABTB2Q8N961 1025 aa6.01□□□□□ -1.45
RLIM-201ENST00000332687 TXLNAP40222 546 aa6.01□□□□□ -1.45
RLIM-201ENST00000332687 ITSN2Q9NZM3 1697 aa6.01□□□□□ -1.45
RLIM-201ENST00000332687 STARD3NLO95772 234 aa6.01□□□□□ -1.45
RLIM-201ENST00000332687 TRAF1Q13077 416 aa6.01□□□□□ -1.45
RLIM-201ENST00000332687 RUNDC1Q96C34 613 aa6.01□□□□□ -1.45
RLIM-201ENST00000332687 GOLGA6L19H0YKK7 550 aa6.01□□□□□ -1.45
RLIM-201ENST00000332687 CCDC173Q0VFZ6 552 aa6.01□□□□□ -1.45
RLIM-201ENST00000332687 KLHL34Q8N239 644 aa6.01□□□□□ -1.45
RLIM-201ENST00000332687 NACAP1Q9BZK3 213 aa6.01□□□□□ -1.45
RLIM-201ENST00000332687 FBXW7Q969H0 707 aa6□□□□□ -1.45
RLIM-201ENST00000332687 TEX13AQ9BXU3 409 aaPredicted RBP6□□□□□ -1.45
RLIM-201ENST00000332687 FGD6Q6ZV73 1430 aa6□□□□□ -1.45
RLIM-201ENST00000332687 MINK1Q8N4C8 1332 aaPredicted RBP6□□□□□ -1.45
RLIM-201ENST00000332687 APPP05067 770 aa6□□□□□ -1.45
RLIM-201ENST00000332687 NLRP6P59044 892 aa6□□□□□ -1.45
RLIM-201ENST00000332687 A0A087WZG4 1122 aa6□□□□□ -1.45
RLIM-201ENST00000332687 DDX11L8A8MPP1 907 aa6□□□□□ -1.45
RLIM-201ENST00000332687 HMGB1P09429 215 aaKnown RBP6□□□□□ -1.45
RLIM-201ENST00000332687 ESCO1Q5FWF5 840 aa6□□□□□ -1.45
RLIM-201ENST00000332687 LUC7LQ9NQ29 371 aaKnown RBP6□□□□□ -1.45
RLIM-201ENST00000332687 IGF1RP08069 1367 aa6□□□□□ -1.45
RLIM-201ENST00000332687 USP47Q96K76 1375 aa6□□□□□ -1.45
RLIM-201ENST00000332687 TSPYL4Q9UJ04 414 aa5.99□□□□□ -1.45
RLIM-201ENST00000332687 WDR97A6NE52 1622 aa5.99□□□□□ -1.45
RLIM-201ENST00000332687 SIN3AQ96ST3 1273 aa5.99□□□□□ -1.45
RLIM-201ENST00000332687 TAOK2Q9UL54 1235 aa5.99□□□□□ -1.45
RLIM-201ENST00000332687 CADPS2Q86UW7 1296 aa5.99□□□□□ -1.45
RLIM-201ENST00000332687 CD109Q6YHK3 1445 aa5.99□□□□□ -1.45
RLIM-201ENST00000332687 MCM2P49736 904 aa5.99□□□□□ -1.45
RLIM-201ENST00000332687 CENPQQ7L2Z9 268 aaPredicted RBP5.99□□□□□ -1.45
RLIM-201ENST00000332687 CHMP5Q9NZZ3 219 aa5.99□□□□□ -1.45
RLIM-201ENST00000332687 C9orf84Q5VXU9 1444 aa5.99□□□□□ -1.45
RLIM-201ENST00000332687 ATF7IPQ6VMQ6 1270 aa5.99□□□□□ -1.45
RLIM-201ENST00000332687 NFXL1Q6ZNB6 911 aa5.99□□□□□ -1.45
RLIM-201ENST00000332687 PPP1R1BQ9UD71 204 aaPredicted RBP5.99□□□□□ -1.45
RLIM-201ENST00000332687 EHMT1Q9H9B1 1298 aa5.99□□□□□ -1.45
RLIM-201ENST00000332687 PRDM11Q9NQV5 511 aa5.99□□□□□ -1.45
RLIM-201ENST00000332687 TNIP1Q15025 636 aa5.98□□□□□ -1.45
RLIM-201ENST00000332687 AMOTQ4VCS5 1084 aa5.98□□□□□ -1.45
RLIM-201ENST00000332687 TOM1L2Q6ZVM7 507 aa5.98□□□□□ -1.45
RLIM-201ENST00000332687 PDCP20941 246 aa5.98□□□□□ -1.45
RLIM-201ENST00000332687 EPS15P42566 896 aa5.98□□□□□ -1.45
RLIM-201ENST00000332687 CABP4P57796 275 aa5.98□□□□□ -1.45
RLIM-201ENST00000332687 CCDC158Q5M9N0 1113 aa5.98□□□□□ -1.45
RLIM-201ENST00000332687 AQRO60306 1485 aaKnown RBP eCLIP5.98□□□□□ -1.452e-7■■□□□ 12
RLIM-201ENST00000332687 CT47A1Q5JQC4 288 aaPredicted RBP5.98□□□□□ -1.45
RLIM-201ENST00000332687 L3MBTL2Q969R5 705 aa5.98□□□□□ -1.45
RLIM-201ENST00000332687 CFAP74Q9C0B2 1584 aa5.98□□□□□ -1.45
RLIM-201ENST00000332687 NAT10Q9H0A0 1025 aaKnown RBP5.98□□□□□ -1.45
RLIM-201ENST00000332687 RTEL1-TNFRSF6BF6WH68 1400 aa5.97□□□□□ -1.45
RLIM-201ENST00000332687 IKQ13123 557 aaPredicted RBP5.97□□□□□ -1.45
RLIM-201ENST00000332687 FKBP5Q13451 457 aaPredicted RBP5.97□□□□□ -1.45
RLIM-201ENST00000332687 CNTROBQ8N137 903 aa5.97□□□□□ -1.45
RLIM-201ENST00000332687 DENND4BO75064 1496 aaPredicted RBP5.97□□□□□ -1.45
RLIM-201ENST00000332687 MSH6P52701 1360 aa5.97□□□□□ -1.45
RLIM-201ENST00000332687 DNAJC2Q99543 621 aaKnown RBP5.97□□□□□ -1.45
RLIM-201ENST00000332687 FAM135AQ9P2D6 1515 aa5.97□□□□□ -1.45
RLIM-201ENST00000332687 LRRC9Q6ZRR7 1453 aa5.97□□□□□ -1.45
RLIM-201ENST00000332687 INTS3Q68E01 1043 aaKnown RBP5.97□□□□□ -1.45
RLIM-201ENST00000332687 CLASRPQ8N2M8 674 aaKnown RBP5.97□□□□□ -1.45
RLIM-201ENST00000332687 B4DLN1 442 aa5.97□□□□□ -1.45
RLIM-201ENST00000332687 MRPL12P52815 198 aaKnown RBP5.97□□□□□ -1.45
RLIM-201ENST00000332687 JMYQ8N9B5 988 aa5.97□□□□□ -1.45
RLIM-201ENST00000332687 BECN2A8MW95 431 aa5.97□□□□□ -1.45
RLIM-201ENST00000332687 UBTFL1P0CB47 393 aaPredicted RBP5.97□□□□□ -1.45
RLIM-201ENST00000332687 RAD54L2Q9Y4B4 1467 aa5.97□□□□□ -1.45
RLIM-201ENST00000332687 ZPR1O75312 459 aa5.97□□□□□ -1.45
RLIM-201ENST00000332687 ZRSR2Q15696 482 aaKnown RBP5.97□□□□□ -1.45
RLIM-201ENST00000332687 HIRIP3Q9BW71 556 aaPredicted RBP5.97□□□□□ -1.45
RLIM-201ENST00000332687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.96□□□□□ -1.45
RLIM-201ENST00000332687 NGLY1Q96IV0 654 aa5.96□□□□□ -1.45
RLIM-201ENST00000332687 FANCAO15360 1455 aa5.96□□□□□ -1.45
RLIM-201ENST00000332687 ANKRD1Q15327 319 aa5.96□□□□□ -1.45
RLIM-201ENST00000332687 ANKRD18AQ8IVF6 992 aa5.96□□□□□ -1.45
RLIM-201ENST00000332687 SRCIN1Q9C0H9 1055 aa5.96□□□□□ -1.45
RLIM-201ENST00000332687 CCT4P50991 539 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms