RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 GAS2L3Q86XJ1 694 aa30.63■■■□□ 2.49
SOX1-201ENST00000330949 GBP4Q96PP9 640 aa30.63■■■□□ 2.49
SOX1-201ENST00000330949 NCOA3Q9Y6Q9 1424 aa30.63■■■□□ 2.49
SOX1-201ENST00000330949 PDZRN4Q6ZMN7 1036 aaPredicted RBP30.62■■■□□ 2.49
SOX1-201ENST00000330949 EFCAB2Q5VUJ9 269 aa30.61■■■□□ 2.49
SOX1-201ENST00000330949 SCAPERQ9BY12 1400 aa30.61■■■□□ 2.49
SOX1-201ENST00000330949 NPC1L1Q9UHC9 1359 aa30.61■■■□□ 2.49
SOX1-201ENST00000330949 PRDM4Q9UKN5 801 aa30.6■■■□□ 2.49
SOX1-201ENST00000330949 SYNMO15061 1565 aa30.6■■■□□ 2.49
SOX1-201ENST00000330949 UNC13BO14795 1591 aa30.59■■■□□ 2.49
SOX1-201ENST00000330949 DDIT3P35638 169 aa30.59■■■□□ 2.49
SOX1-201ENST00000330949 MFAP1P55081 439 aaKnown RBP30.59■■■□□ 2.49
SOX1-201ENST00000330949 PPP1R9BQ96SB3 815 aa30.59■■■□□ 2.49
SOX1-201ENST00000330949 CIZ1Q9ULV3 898 aaPredicted RBP30.59■■■□□ 2.49
SOX1-201ENST00000330949 ANP32BQ92688 251 aaKnown RBP30.58■■■□□ 2.49
SOX1-201ENST00000330949 MYO5CQ9NQX4 1742 aa30.58■■■□□ 2.49
SOX1-201ENST00000330949 DMRT2Q9Y5R5 561 aa30.58■■■□□ 2.49
SOX1-201ENST00000330949 CDCA8Q53HL2 280 aa30.57■■■□□ 2.48
SOX1-201ENST00000330949 SHROOM2Q13796 1616 aa30.56■■■□□ 2.48
SOX1-201ENST00000330949 MSNP26038 577 aaKnown RBP30.56■■■□□ 2.48
SOX1-201ENST00000330949 TNPO1Q92973 898 aaKnown RBP30.55■■■□□ 2.48
SOX1-201ENST00000330949 PLCH2O75038 1416 aa30.55■■■□□ 2.48
SOX1-201ENST00000330949 MAST1Q9Y2H9 1570 aa30.54■■■□□ 2.48
SOX1-201ENST00000330949 RNF17Q9BXT8 1623 aaKnown RBP30.54■■■□□ 2.48
SOX1-201ENST00000330949 IQGAP3Q86VI3 1631 aa30.51■■■□□ 2.48
SOX1-201ENST00000330949 NASPP49321 788 aaPredicted RBP30.51■■■□□ 2.48
SOX1-201ENST00000330949 RARSP54136 660 aaKnown RBP30.51■■■□□ 2.48
SOX1-201ENST00000330949 RIPK4P57078 832 aa30.51■■■□□ 2.47
SOX1-201ENST00000330949 SMC5Q8IY18 1101 aa30.51■■■□□ 2.47
SOX1-201ENST00000330949 SNX21Q969T3 373 aa30.51■■■□□ 2.47
SOX1-201ENST00000330949 DUOX2Q9NRD8 1548 aa30.51■■■□□ 2.47
SOX1-201ENST00000330949 WWC1Q8IX03 1113 aa30.51■■■□□ 2.47
SOX1-201ENST00000330949 SPAG9O60271 1321 aaKnown RBP30.51■■■□□ 2.47
SOX1-201ENST00000330949 RAB3GAP1Q15042 981 aa30.49■■■□□ 2.47
SOX1-201ENST00000330949 RLBP1P12271 317 aa30.48■■■□□ 2.47
SOX1-201ENST00000330949 RBM10P98175 930 aaKnown RBP30.47■■■□□ 2.47
SOX1-201ENST00000330949 IBTKQ9P2D0 1353 aaPredicted RBP30.46■■■□□ 2.47
SOX1-201ENST00000330949 ZCCHC11Q5TAX3 1644 aaKnown RBP30.45■■■□□ 2.47
SOX1-201ENST00000330949 MTERF4Q7Z6M4 381 aaKnown RBP30.45■■■□□ 2.47
SOX1-201ENST00000330949 HS1BP3Q53T59 392 aa30.44■■■□□ 2.46
SOX1-201ENST00000330949 FAM13BQ9NYF5 915 aa30.43■■■□□ 2.46
SOX1-201ENST00000330949 RBM25P49756 843 aaKnown RBP30.43■■■□□ 2.46
SOX1-201ENST00000330949 HSP90AB1P08238 724 aaKnown RBP30.42■■■□□ 2.46
SOX1-201ENST00000330949 KIF3BO15066 747 aa30.42■■■□□ 2.46
SOX1-201ENST00000330949 GOLGA6L22H0YM25 854 aa30.41■■■□□ 2.46
SOX1-201ENST00000330949 IQGAP1P46940 1657 aa30.4■■■□□ 2.46
SOX1-201ENST00000330949 SMAP1Q8IYB5 467 aaPredicted RBP30.4■■■□□ 2.46
SOX1-201ENST00000330949 SENP3Q9H4L4 574 aaPredicted RBP30.4■■■□□ 2.46
SOX1-201ENST00000330949 ABCC1P33527 1531 aa30.38■■■□□ 2.45
SOX1-201ENST00000330949 ATP10AO60312 1499 aa30.38■■■□□ 2.45
SOX1-201ENST00000330949 MVPQ14764 893 aaKnown RBP30.38■■■□□ 2.45
SOX1-201ENST00000330949 R3HCC1Q9Y3T6 440 aaKnown RBP30.38■■■□□ 2.45
SOX1-201ENST00000330949 MYOM1P52179 1685 aa30.38■■■□□ 2.45
SOX1-201ENST00000330949 CHGAP10645 457 aaKnown RBP30.37■■■□□ 2.45
SOX1-201ENST00000330949 CFAP70Q5T0N1 1121 aa30.37■■■□□ 2.45
SOX1-201ENST00000330949 TNNQ9UQP3 1299 aa30.37■■■□□ 2.45
SOX1-201ENST00000330949 ZNF500O60304 480 aaPredicted RBP30.35■■■□□ 2.45
SOX1-201ENST00000330949 KLHL40Q2TBA0 621 aa30.35■■■□□ 2.45
SOX1-201ENST00000330949 TNNT2P45379 298 aaPredicted RBP30.34■■■□□ 2.45
SOX1-201ENST00000330949 NOL7Q9UMY1 257 aaKnown RBP30.33■■■□□ 2.45
SOX1-201ENST00000330949 HDAC1Q13547 482 aaPredicted RBP30.32■■■□□ 2.44
SOX1-201ENST00000330949 UQCRHLA0A096LP55 91 aa30.31■■■□□ 2.44
SOX1-201ENST00000330949 UQCRHP07919 91 aa30.31■■■□□ 2.44
SOX1-201ENST00000330949 BCL2L13Q9BXK5 485 aa30.31■■■□□ 2.44
SOX1-201ENST00000330949 POLR3AO14802 1390 aaPredicted RBP30.31■■■□□ 2.44
SOX1-201ENST00000330949 WDR63Q8IWG1 891 aa30.31■■■□□ 2.44
SOX1-201ENST00000330949 DYNC1I1O14576 645 aa30.3■■■□□ 2.44
SOX1-201ENST00000330949 CLEC17AQ6ZS10 378 aa30.3■■■□□ 2.44
SOX1-201ENST00000330949 DDX49Q9Y6V7 483 aaKnown RBP30.3■■■□□ 2.44
SOX1-201ENST00000330949 SCAF11Q99590 1463 aaKnown RBP30.29■■■□□ 2.44
SOX1-201ENST00000330949 CSPP1Q1MSJ5 1256 aa30.29■■■□□ 2.44
SOX1-201ENST00000330949 FTSJ3Q8IY81 847 aaKnown RBP30.29■■■□□ 2.44
SOX1-201ENST00000330949 ZKSCAN2Q63HK3 967 aa30.27■■■□□ 2.44
SOX1-201ENST00000330949 KDM5AP29375 1690 aaKnown RBP30.27■■■□□ 2.44
SOX1-201ENST00000330949 ZNF445P59923 1031 aa30.27■■■□□ 2.44
SOX1-201ENST00000330949 NEUROD2Q15784 382 aa30.26■■■□□ 2.43
SOX1-201ENST00000330949 DZIP1LQ8IYY4 767 aaKnown RBP30.26■■■□□ 2.43
SOX1-201ENST00000330949 RUNDC1Q96C34 613 aa30.26■■■□□ 2.43
SOX1-201ENST00000330949 PHF23Q9BUL5 403 aaPredicted RBP30.26■■■□□ 2.43
SOX1-201ENST00000330949 ADGRF5Q8IZF2 1346 aa30.25■■■□□ 2.43
SOX1-201ENST00000330949 MADDQ8WXG6 1647 aa30.25■■■□□ 2.43
SOX1-201ENST00000330949 UGGT1Q9NYU2 1555 aa30.25■■■□□ 2.43
SOX1-201ENST00000330949 KANK1Q14678 1352 aa30.25■■■□□ 2.43
SOX1-201ENST00000330949 ZFYVE16Q7Z3T8 1539 aa30.24■■■□□ 2.43
SOX1-201ENST00000330949 K7ELQ4 463 aaPredicted RBP30.23■■■□□ 2.43
SOX1-201ENST00000330949 PDLIM2Q96JY6 352 aa30.23■■■□□ 2.43
SOX1-201ENST00000330949 CLTCL1P53675 1640 aa30.23■■■□□ 2.43
SOX1-201ENST00000330949 MCM5P33992 734 aa30.23■■■□□ 2.43
SOX1-201ENST00000330949 UHRF1BP1LA0JNW5 1464 aa30.22■■■□□ 2.43
SOX1-201ENST00000330949 ARHGAP31Q2M1Z3 1444 aa30.21■■■□□ 2.43
SOX1-201ENST00000330949 IQSEC2Q5JU85 1478 aa30.21■■■□□ 2.43
SOX1-201ENST00000330949 SSFA2P28290 1259 aa30.2■■■□□ 2.43
SOX1-201ENST00000330949 XPCQ01831 940 aaPredicted RBP30.2■■■□□ 2.43
SOX1-201ENST00000330949 TCP11L2Q8N4U5 519 aa30.2■■■□□ 2.43
SOX1-201ENST00000330949 RRP7AQ9Y3A4 280 aaKnown RBP30.19■■■□□ 2.42
SOX1-201ENST00000330949 FANCAO15360 1455 aa30.19■■■□□ 2.42
SOX1-201ENST00000330949 BAG4O95429 457 aaKnown RBP30.19■■■□□ 2.42
SOX1-201ENST00000330949 DDX19BQ9UMR2 479 aa30.19■■■□□ 2.42
SOX1-201ENST00000330949 ZKSCAN5Q9Y2L8 839 aa30.19■■■□□ 2.42
SOX1-201ENST00000330949 A0A0U1RQG5 324 aaPredicted RBP30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms