RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 TRIM34Q9BYJ4 488 aa19.78■□□□□ 0.76
SMAD3-201ENST00000327367 C9orf78Q9NZ63 289 aaPredicted RBP19.78■□□□□ 0.76
SMAD3-201ENST00000327367 DEF6Q9H4E7 631 aa19.78■□□□□ 0.76
SMAD3-201ENST00000327367 VPS8Q8N3P4 1428 aa19.77■□□□□ 0.76
SMAD3-201ENST00000327367 ODF2Q5BJF6 829 aa19.77■□□□□ 0.76
SMAD3-201ENST00000327367 RNF20Q5VTR2 975 aa19.77■□□□□ 0.76
SMAD3-201ENST00000327367 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.77■□□□□ 0.76
SMAD3-201ENST00000327367 OFD1O75665 1012 aa19.77■□□□□ 0.75
SMAD3-201ENST00000327367 EPS15P42566 896 aa19.76■□□□□ 0.75
SMAD3-201ENST00000327367 ESPNB1AK53 854 aa19.76■□□□□ 0.75
SMAD3-201ENST00000327367 CGNQ9P2M7 1197 aaKnown RBP19.76■□□□□ 0.75
SMAD3-201ENST00000327367 CDC45O75419 566 aa19.75■□□□□ 0.75
SMAD3-201ENST00000327367 PDCL2Q8N4E4 241 aa19.75■□□□□ 0.75
SMAD3-201ENST00000327367 GTF2E1P29083 439 aaPredicted RBP19.75■□□□□ 0.75
SMAD3-201ENST00000327367 STK11IPQ8N1F8 1099 aa19.75■□□□□ 0.75
SMAD3-201ENST00000327367 LETM1O95202 739 aaPredicted RBP19.75■□□□□ 0.75
SMAD3-201ENST00000327367 TAF3Q5VWG9 929 aa19.75■□□□□ 0.75
SMAD3-201ENST00000327367 ATP2B1P20020 1258 aa19.74■□□□□ 0.75
SMAD3-201ENST00000327367 MTMR7Q9Y216 660 aa19.74■□□□□ 0.75
SMAD3-201ENST00000327367 TRDNQ13061 729 aa19.74■□□□□ 0.75
SMAD3-201ENST00000327367 CCDC102AQ96A19 550 aa19.73■□□□□ 0.75
SMAD3-201ENST00000327367 CHMP4AQ9BY43 222 aa19.73■□□□□ 0.75
SMAD3-201ENST00000327367 ANKRD62A6NC57 917 aa19.73■□□□□ 0.75
SMAD3-201ENST00000327367 HDGFP51858 240 aaKnown RBP19.73■□□□□ 0.75
SMAD3-201ENST00000327367 SAMD1Q6SPF0 538 aaPredicted RBP19.73■□□□□ 0.75
SMAD3-201ENST00000327367 NEK4P51957 841 aa19.72■□□□□ 0.75
SMAD3-201ENST00000327367 TICAM2Q86XR7 235 aa19.72■□□□□ 0.75
SMAD3-201ENST00000327367 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.72■□□□□ 0.75
SMAD3-201ENST00000327367 NEFHP12036 1026 aa19.72■□□□□ 0.75
SMAD3-201ENST00000327367 DHX57Q6P158 1386 aaKnown RBP19.72■□□□□ 0.75
SMAD3-201ENST00000327367 TAX1BP1Q86VP1 789 aa19.72■□□□□ 0.75
SMAD3-201ENST00000327367 RIPK4P57078 832 aa19.72■□□□□ 0.75
SMAD3-201ENST00000327367 ENOX2Q16206 610 aaKnown RBP19.72■□□□□ 0.75
SMAD3-201ENST00000327367 ZMYND15Q9H091 742 aa19.72■□□□□ 0.75
SMAD3-201ENST00000327367 GIMAP7Q8NHV1 300 aa19.72■□□□□ 0.75
SMAD3-201ENST00000327367 FMN1Q68DA7 1419 aa19.71■□□□□ 0.75
SMAD3-201ENST00000327367 KINO60870 393 aaKnown RBP19.71■□□□□ 0.75
SMAD3-201ENST00000327367 MBD3O95983 291 aa19.71■□□□□ 0.75
SMAD3-201ENST00000327367 SERPINC1P01008 464 aa19.71■□□□□ 0.75
SMAD3-201ENST00000327367 NGDNQ8NEJ9 315 aaKnown RBP19.71■□□□□ 0.75
SMAD3-201ENST00000327367 IPO4Q8TEX9 1081 aaKnown RBP19.71■□□□□ 0.75
SMAD3-201ENST00000327367 ZFP91Q96JP5 570 aaPredicted RBP19.71■□□□□ 0.75
SMAD3-201ENST00000327367 FYB1O15117 783 aa19.7■□□□□ 0.74
SMAD3-201ENST00000327367 SAFBQ15424 915 aaKnown RBP eCLIP19.7■□□□□ 0.74
SMAD3-201ENST00000327367 CDCA7LQ96GN5 454 aa19.7■□□□□ 0.74
SMAD3-201ENST00000327367 MSH5O43196 834 aa19.7■□□□□ 0.74
SMAD3-201ENST00000327367 TNNT1P13805 278 aa19.69■□□□□ 0.74
SMAD3-201ENST00000327367 GOLGA6L10A6NI86 522 aa19.69■□□□□ 0.74
SMAD3-201ENST00000327367 DYDC1Q8WWB3 177 aa19.69■□□□□ 0.74
SMAD3-201ENST00000327367 ERICH2A1L162 156 aa19.69■□□□□ 0.74
SMAD3-201ENST00000327367 PDZRN3Q9UPQ7 1066 aa19.69■□□□□ 0.74
SMAD3-201ENST00000327367 C1orf115Q9H7X2 142 aa19.69■□□□□ 0.74
SMAD3-201ENST00000327367 CCP110O43303 1012 aa19.68■□□□□ 0.74
SMAD3-201ENST00000327367 FKBP5Q13451 457 aaPredicted RBP19.68■□□□□ 0.74
SMAD3-201ENST00000327367 SMARCE1Q969G3 411 aa19.68■□□□□ 0.74
SMAD3-201ENST00000327367 G3BP1Q13283 466 aaKnown RBP eCLIP19.67■□□□□ 0.74
SMAD3-201ENST00000327367 STK3Q13188 491 aa19.67■□□□□ 0.74
SMAD3-201ENST00000327367 MYO6Q9UM54 1294 aa19.66■□□□□ 0.74
SMAD3-201ENST00000327367 SPDYE4A6NLX3 237 aa19.66■□□□□ 0.74
SMAD3-201ENST00000327367 TNMDQ9H2S6 317 aa19.66■□□□□ 0.74
SMAD3-201ENST00000327367 XPCQ01831 940 aaPredicted RBP19.65■□□□□ 0.74
SMAD3-201ENST00000327367 POLR3GO15318 223 aaPredicted RBP19.65■□□□□ 0.74
SMAD3-201ENST00000327367 EIF3JO75822 258 aaKnown RBP19.65■□□□□ 0.74
SMAD3-201ENST00000327367 WASHC4Q2M389 1173 aa19.65■□□□□ 0.74
SMAD3-201ENST00000327367 CCDC181Q5TID7 509 aa19.64■□□□□ 0.74
SMAD3-201ENST00000327367 USP47Q96K76 1375 aa19.64■□□□□ 0.74
SMAD3-201ENST00000327367 FILIP1LQ4L180 1135 aa19.64■□□□□ 0.73
SMAD3-201ENST00000327367 CCDC192P0DO97 292 aa19.64■□□□□ 0.73
SMAD3-201ENST00000327367 API5Q9BZZ5 524 aaKnown RBP19.64■□□□□ 0.73
SMAD3-201ENST00000327367 UBE2Q2Q8WVN8 375 aa19.64■□□□□ 0.73
SMAD3-201ENST00000327367 NEUROD6Q96NK8 337 aa19.64■□□□□ 0.73
SMAD3-201ENST00000327367 LRRCC1Q9C099 1032 aa19.64■□□□□ 0.73
SMAD3-201ENST00000327367 CCDC43Q96MW1 224 aaKnown RBP19.63■□□□□ 0.73
SMAD3-201ENST00000327367 HNRNPMP52272 730 aaKnown RBP eCLIP19.63■□□□□ 0.739e-7■■■■□ 22
SMAD3-201ENST00000327367 GOLGA6L7A0A1B0GV03 622 aa19.63■□□□□ 0.73
SMAD3-201ENST00000327367 USP8P40818 1118 aa19.63■□□□□ 0.73
SMAD3-201ENST00000327367 AKNAQ7Z591 1439 aa19.63■□□□□ 0.73
SMAD3-201ENST00000327367 LRRFIP1Q32MZ4 808 aaKnown RBP19.63■□□□□ 0.73
SMAD3-201ENST00000327367 RALYLQ86SE5 291 aaKnown RBP19.63■□□□□ 0.73
SMAD3-201ENST00000327367 NEXNQ0ZGT2 675 aa19.62■□□□□ 0.73
SMAD3-201ENST00000327367 FILIP1Q7Z7B0 1213 aa19.62■□□□□ 0.73
SMAD3-201ENST00000327367 AMOTL1Q8IY63 956 aa19.62■□□□□ 0.73
SMAD3-201ENST00000327367 BACH2Q9BYV9 841 aa19.62■□□□□ 0.73
SMAD3-201ENST00000327367 MAGEC2Q9UBF1 373 aaPredicted RBP19.62■□□□□ 0.73
SMAD3-201ENST00000327367 CARMIL1Q5VZK9 1371 aa19.62■□□□□ 0.73
SMAD3-201ENST00000327367 ERLIN1O75477 346 aa19.62■□□□□ 0.73
SMAD3-201ENST00000327367 C1orf141Q5JVX7 400 aa19.61■□□□□ 0.73
SMAD3-201ENST00000327367 LRRFIP2Q9Y608 721 aaKnown RBP19.61■□□□□ 0.73
SMAD3-201ENST00000327367 TMX1Q9H3N1 280 aa19.61■□□□□ 0.73
SMAD3-201ENST00000327367 ZRSR2Q15696 482 aaKnown RBP19.61■□□□□ 0.73
SMAD3-201ENST00000327367 SYCE3A1L190 88 aa19.61■□□□□ 0.73
SMAD3-201ENST00000327367 MAP4K4O95819 1239 aaPredicted RBP19.61■□□□□ 0.73
SMAD3-201ENST00000327367 SEPT7Q16181 437 aaKnown RBP19.6■□□□□ 0.73
SMAD3-201ENST00000327367 ZNF526Q8TF50 670 aaPredicted RBP19.6■□□□□ 0.73
SMAD3-201ENST00000327367 C11orf95C9JLR9 678 aaPredicted RBP19.6■□□□□ 0.73
SMAD3-201ENST00000327367 HMOX1P09601 288 aa19.6■□□□□ 0.73
SMAD3-201ENST00000327367 ERC2O15083 957 aa19.6■□□□□ 0.73
SMAD3-201ENST00000327367 CNKSR2Q8WXI2 1034 aa19.6■□□□□ 0.73
SMAD3-201ENST00000327367 NOL10Q9BSC4 688 aaKnown RBP19.6■□□□□ 0.73
SMAD3-201ENST00000327367 ANKRD30AQ9BXX3 1397 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms