RNA–Protein interactions for RNA: ENST00000326197.11

SCMH1-201, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCMH1, Length 3,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-201ENST00000326197 ANTXR1Q9H6X2 564 aa12.77□□□□□ -0.37
SCMH1-201ENST00000326197 AAMPQ13685 434 aa12.77□□□□□ -0.37
SCMH1-201ENST00000326197 STAC3Q96MF2 364 aa12.77□□□□□ -0.37
SCMH1-201ENST00000326197 ADGRF5Q8IZF2 1346 aa12.76□□□□□ -0.37
SCMH1-201ENST00000326197 MYO5CQ9NQX4 1742 aa12.76□□□□□ -0.37
SCMH1-201ENST00000326197 NSD3Q9BZ95 1437 aa12.75□□□□□ -0.37
SCMH1-201ENST00000326197 NPC1L1Q9UHC9 1359 aa12.75□□□□□ -0.37
SCMH1-201ENST00000326197 DDX11L8A8MPP1 907 aa12.75□□□□□ -0.37
SCMH1-201ENST00000326197 WDR63Q8IWG1 891 aa12.75□□□□□ -0.37
SCMH1-201ENST00000326197 DUOX2Q9NRD8 1548 aa12.75□□□□□ -0.37
SCMH1-201ENST00000326197 MRE11P49959 708 aa12.75□□□□□ -0.37
SCMH1-201ENST00000326197 LNPKQ9C0E8 428 aa12.75□□□□□ -0.37
SCMH1-201ENST00000326197 ABCC2Q92887 1545 aa12.74□□□□□ -0.37
SCMH1-201ENST00000326197 EXOSC9Q06265 439 aaKnown RBP12.74□□□□□ -0.37
SCMH1-201ENST00000326197 TMEM132EQ6IEE7 984 aa12.74□□□□□ -0.37
SCMH1-201ENST00000326197 SCAPERQ9BY12 1400 aa12.74□□□□□ -0.37
SCMH1-201ENST00000326197 ANP32BQ92688 251 aaKnown RBP12.74□□□□□ -0.37
SCMH1-201ENST00000326197 LAMC1P11047 1609 aa12.74□□□□□ -0.37
SCMH1-201ENST00000326197 NUTM2DQ5VT03 806 aaPredicted RBP12.73□□□□□ -0.37
SCMH1-201ENST00000326197 SYNMO15061 1565 aa12.73□□□□□ -0.37
SCMH1-201ENST00000326197 HSP90AA2PQ14568 343 aaPredicted RBP12.73□□□□□ -0.37
SCMH1-201ENST00000326197 GBP4Q96PP9 640 aa12.73□□□□□ -0.37
SCMH1-201ENST00000326197 DDX19BQ9UMR2 479 aa12.73□□□□□ -0.37
SCMH1-201ENST00000326197 CDC42BPBQ9Y5S2 1711 aa12.72□□□□□ -0.37
SCMH1-201ENST00000326197 MAST1Q9Y2H9 1570 aa12.72□□□□□ -0.37
SCMH1-201ENST00000326197 GRPEL1Q9HAV7 217 aa12.72□□□□□ -0.37
SCMH1-201ENST00000326197 POLR3AO14802 1390 aaPredicted RBP12.72□□□□□ -0.37
SCMH1-201ENST00000326197 NCLP19338 710 aaKnown RBP12.72□□□□□ -0.37
SCMH1-201ENST00000326197 CLASP1Q7Z460 1538 aa12.71□□□□□ -0.37
SCMH1-201ENST00000326197 UNC13BO14795 1591 aa12.71□□□□□ -0.37
SCMH1-201ENST00000326197 PREX2Q70Z35 1606 aa12.71□□□□□ -0.37
SCMH1-201ENST00000326197 VSIG10Q8N0Z9 540 aa12.71□□□□□ -0.38
SCMH1-201ENST00000326197 IQGAP3Q86VI3 1631 aa12.7□□□□□ -0.38
SCMH1-201ENST00000326197 GOLGA6L22H0YM25 854 aa12.7□□□□□ -0.38
SCMH1-201ENST00000326197 TRAPPC8Q9Y2L5 1435 aa12.7□□□□□ -0.38
SCMH1-201ENST00000326197 TRIM27P14373 513 aa12.7□□□□□ -0.38
SCMH1-201ENST00000326197 SSH1Q8WYL5 1049 aa12.7□□□□□ -0.38
SCMH1-201ENST00000326197 NOB1Q9ULX3 412 aaKnown RBP12.7□□□□□ -0.38
SCMH1-201ENST00000326197 IPO8O15397 1037 aaKnown RBP12.69□□□□□ -0.38
SCMH1-201ENST00000326197 TTC37Q6PGP7 1564 aa12.69□□□□□ -0.38
SCMH1-201ENST00000326197 ESPNB1AK53 854 aa12.69□□□□□ -0.38
SCMH1-201ENST00000326197 ANKRD45Q5TZF3 282 aa12.69□□□□□ -0.38
SCMH1-201ENST00000326197 ATF7IPQ6VMQ6 1270 aa12.68□□□□□ -0.38
SCMH1-201ENST00000326197 ATP10AO60312 1499 aa12.68□□□□□ -0.38
SCMH1-201ENST00000326197 CLCN1P35523 988 aa12.68□□□□□ -0.38
SCMH1-201ENST00000326197 SRPK2P78362 688 aaKnown RBP12.68□□□□□ -0.38
SCMH1-201ENST00000326197 TMEM57Q8N5G2 664 aa12.68□□□□□ -0.38
SCMH1-201ENST00000326197 STK26Q9P289 416 aa12.68□□□□□ -0.38
SCMH1-201ENST00000326197 KDM5AP29375 1690 aaKnown RBP12.68□□□□□ -0.38
SCMH1-201ENST00000326197 TRHP20396 242 aaPredicted RBP12.68□□□□□ -0.38
SCMH1-201ENST00000326197 GGT6Q6P531 493 aa12.67□□□□□ -0.38
SCMH1-201ENST00000326197 MADDQ8WXG6 1647 aa12.67□□□□□ -0.38
SCMH1-201ENST00000326197 FSD2A1L4K1 749 aa12.67□□□□□ -0.38
SCMH1-201ENST00000326197 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.67□□□□□ -0.38
SCMH1-201ENST00000326197 ERVK-7P63135 1459 aa12.67□□□□□ -0.38
SCMH1-201ENST00000326197 RIPK4P57078 832 aa12.66□□□□□ -0.38
SCMH1-201ENST00000326197 TNPO1Q92973 898 aaKnown RBP12.66□□□□□ -0.38
SCMH1-201ENST00000326197 GGNBP2Q9H3C7 697 aa12.66□□□□□ -0.38
SCMH1-201ENST00000326197 CABP2Q9NPB3 220 aa12.66□□□□□ -0.38
SCMH1-201ENST00000326197 NLRP1Q9C000 1473 aa12.65□□□□□ -0.38
SCMH1-201ENST00000326197 C1orf115Q9H7X2 142 aa12.65□□□□□ -0.38
SCMH1-201ENST00000326197 ELL2O00472 640 aaPredicted RBP12.65□□□□□ -0.38
SCMH1-201ENST00000326197 RNF17Q9BXT8 1623 aaKnown RBP12.65□□□□□ -0.39
SCMH1-201ENST00000326197 DDX49Q9Y6V7 483 aaKnown RBP12.64□□□□□ -0.39
SCMH1-201ENST00000326197 TMPOP42166 694 aaKnown RBP12.64□□□□□ -0.39
SCMH1-201ENST00000326197 EVC2Q86UK5 1308 aa12.64□□□□□ -0.39
SCMH1-201ENST00000326197 HDAC1Q13547 482 aaPredicted RBP12.63□□□□□ -0.39
SCMH1-201ENST00000326197 SKOR2Q2VWA4 1001 aaPredicted RBP12.63□□□□□ -0.39
SCMH1-201ENST00000326197 IQGAP1P46940 1657 aa12.63□□□□□ -0.39
SCMH1-201ENST00000326197 PLCH2O75038 1416 aa12.63□□□□□ -0.39
SCMH1-201ENST00000326197 CCDC27Q2M243 656 aa12.63□□□□□ -0.39
SCMH1-201ENST00000326197 CHD1LQ86WJ1 897 aa12.63□□□□□ -0.39
SCMH1-201ENST00000326197 KIF16BQ96L93 1317 aa12.62□□□□□ -0.39
SCMH1-201ENST00000326197 PLXNC1O60486 1568 aa12.62□□□□□ -0.39
SCMH1-201ENST00000326197 MSNP26038 577 aaKnown RBP12.62□□□□□ -0.39
SCMH1-201ENST00000326197 NOS1P29475 1434 aa12.62□□□□□ -0.39
SCMH1-201ENST00000326197 CT47B1P0C2W7 299 aaPredicted RBP12.61□□□□□ -0.39
SCMH1-201ENST00000326197 SMC5Q8IY18 1101 aa12.61□□□□□ -0.39
SCMH1-201ENST00000326197 TRPM2O94759 1503 aa12.61□□□□□ -0.39
SCMH1-201ENST00000326197 PTPRTO14522 1441 aa12.61□□□□□ -0.39
SCMH1-201ENST00000326197 APBB1O00213 710 aa12.61□□□□□ -0.39
SCMH1-201ENST00000326197 NASPP49321 788 aaPredicted RBP12.61□□□□□ -0.39
SCMH1-201ENST00000326197 PTMSP20962 102 aa12.6□□□□□ -0.39
SCMH1-201ENST00000326197 RBM42Q9BTD8 480 aaKnown RBP12.6□□□□□ -0.39
SCMH1-201ENST00000326197 ISY1Q9ULR0 285 aaKnown RBP12.6□□□□□ -0.39
SCMH1-201ENST00000326197 VIRMAQ69YN4 1812 aaKnown RBP12.6□□□□□ -0.39
SCMH1-201ENST00000326197 UGGT1Q9NYU2 1555 aa12.6□□□□□ -0.39
SCMH1-201ENST00000326197 ZMYM3Q14202 1370 aa12.6□□□□□ -0.39
SCMH1-201ENST00000326197 CHD1O14646 1710 aa12.6□□□□□ -0.39
SCMH1-201ENST00000326197 CLTCL1P53675 1640 aa12.6□□□□□ -0.39
SCMH1-201ENST00000326197 SSFA2P28290 1259 aa12.59□□□□□ -0.39
SCMH1-201ENST00000326197 CIZ1Q9ULV3 898 aaPredicted RBP12.59□□□□□ -0.39
SCMH1-201ENST00000326197 RRP9O43818 475 aaKnown RBP12.59□□□□□ -0.39
SCMH1-201ENST00000326197 GAS2L3Q86XJ1 694 aa12.59□□□□□ -0.39
SCMH1-201ENST00000326197 PKNOX2Q96KN3 472 aa12.59□□□□□ -0.39
SCMH1-201ENST00000326197 K7ELQ4 463 aaPredicted RBP12.59□□□□□ -0.39
SCMH1-201ENST00000326197 DIAPH1O60610 1272 aaKnown RBP12.59□□□□□ -0.39
SCMH1-201ENST00000326197 NUCB1Q02818 461 aa12.59□□□□□ -0.39
SCMH1-201ENST00000326197 PHF23Q9BUL5 403 aaPredicted RBP12.59□□□□□ -0.39
SCMH1-201ENST00000326197 CALD1Q05682 793 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms