RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 PRAM1Q96QH2 718 aa24.36■■□□□ 1.49
SHISA3-201ENST00000319234 SAFB2Q14151 953 aaKnown RBP eCLIP24.36■■□□□ 1.49
SHISA3-201ENST00000319234 POGKQ9P215 609 aa24.36■■□□□ 1.49
SHISA3-201ENST00000319234 NSD3Q9BZ95 1437 aa24.33■■□□□ 1.49
SHISA3-201ENST00000319234 DLC1Q96QB1 1528 aa24.33■■□□□ 1.49
SHISA3-201ENST00000319234 SETD1AO15047 1707 aaKnown RBP24.33■■□□□ 1.48
SHISA3-201ENST00000319234 CABP2Q9NPB3 220 aa24.33■■□□□ 1.48
SHISA3-201ENST00000319234 NLRP1Q9C000 1473 aa24.31■■□□□ 1.48
SHISA3-201ENST00000319234 UBR1Q8IWV7 1749 aa24.31■■□□□ 1.48
SHISA3-201ENST00000319234 BLMP54132 1417 aaPredicted RBP24.31■■□□□ 1.48
SHISA3-201ENST00000319234 TMEM2Q9UHN6 1383 aa24.3■■□□□ 1.48
SHISA3-201ENST00000319234 NINLQ9Y2I6 1382 aa24.3■■□□□ 1.48
SHISA3-201ENST00000319234 NRXN3Q9Y4C0 1643 aa24.3■■□□□ 1.48
SHISA3-201ENST00000319234 ABCC11Q96J66 1382 aa24.3■■□□□ 1.48
SHISA3-201ENST00000319234 MINK1Q8N4C8 1332 aaPredicted RBP24.3■■□□□ 1.48
SHISA3-201ENST00000319234 ANKRD36BQ8N2N9 1353 aa24.29■■□□□ 1.48
SHISA3-201ENST00000319234 SRPK2P78362 688 aaKnown RBP24.29■■□□□ 1.48
SHISA3-201ENST00000319234 CEBPAP49715 358 aaPredicted RBP24.28■■□□□ 1.48
SHISA3-201ENST00000319234 B4GALNT3Q6L9W6 998 aa24.28■■□□□ 1.48
SHISA3-201ENST00000319234 USP32Q8NFA0 1604 aa24.28■■□□□ 1.48
SHISA3-201ENST00000319234 ATAD2Q6PL18 1390 aa24.27■■□□□ 1.48
SHISA3-201ENST00000319234 SENP3-EIF4A1A0A087X0R7 540 aa24.25■■□□□ 1.47
SHISA3-201ENST00000319234 WDR43Q15061 677 aaKnown RBP eCLIP24.25■■□□□ 1.47
SHISA3-201ENST00000319234 C3P01024 1663 aa24.25■■□□□ 1.47
SHISA3-201ENST00000319234 CGNL1Q0VF96 1302 aa24.25■■□□□ 1.47
SHISA3-201ENST00000319234 ADAMTS8Q9UP79 889 aa24.24■■□□□ 1.47
SHISA3-201ENST00000319234 METP08581 1390 aa24.24■■□□□ 1.47
SHISA3-201ENST00000319234 MORC1Q86VD1 984 aa24.23■■□□□ 1.47
SHISA3-201ENST00000319234 FER1L4A9Z1Z3 1794 aa24.23■■□□□ 1.47
SHISA3-201ENST00000319234 CDK19Q9BWU1 502 aa24.22■■□□□ 1.47
SHISA3-201ENST00000319234 PDE3BQ13370 1112 aa24.22■■□□□ 1.47
SHISA3-201ENST00000319234 WAPLQ7Z5K2 1190 aa24.22■■□□□ 1.47
SHISA3-201ENST00000319234 SIRT1Q96EB6 747 aa24.22■■□□□ 1.47
SHISA3-201ENST00000319234 NSD2O96028 1365 aa24.21■■□□□ 1.47
SHISA3-201ENST00000319234 PLEKHH1Q9ULM0 1364 aa24.2■■□□□ 1.46
SHISA3-201ENST00000319234 PLEKHG1Q9ULL1 1385 aa24.18■■□□□ 1.46
SHISA3-201ENST00000319234 TERF2IPQ9NYB0 399 aa24.18■■□□□ 1.46
SHISA3-201ENST00000319234 TECPR2O15040 1411 aa24.18■■□□□ 1.46
SHISA3-201ENST00000319234 A0A1W2PP64 1363 aa24.18■■□□□ 1.46
SHISA3-201ENST00000319234 POLR3AO14802 1390 aaPredicted RBP24.17■■□□□ 1.46
SHISA3-201ENST00000319234 SALL2Q9Y467 1007 aaPredicted RBP24.17■■□□□ 1.46
SHISA3-201ENST00000319234 FAM135BQ49AJ0 1406 aa24.17■■□□□ 1.46
SHISA3-201ENST00000319234 LTKP29376 864 aa24.16■■□□□ 1.46
SHISA3-201ENST00000319234 KNDC1Q76NI1 1749 aa24.16■■□□□ 1.46
SHISA3-201ENST00000319234 ADAMTS13Q76LX8 1427 aa24.16■■□□□ 1.46
SHISA3-201ENST00000319234 MSH5O43196 834 aa24.15■■□□□ 1.46
SHISA3-201ENST00000319234 TXNDC2Q86VQ3 553 aa24.15■■□□□ 1.46
SHISA3-201ENST00000319234 EID1Q9Y6B2 187 aa24.14■■□□□ 1.46
SHISA3-201ENST00000319234 SLIT1O75093 1534 aa24.14■■□□□ 1.45
SHISA3-201ENST00000319234 CD163L1Q9NR16 1453 aa24.14■■□□□ 1.45
SHISA3-201ENST00000319234 ARHGAP23Q9P227 1491 aa24.14■■□□□ 1.45
SHISA3-201ENST00000319234 PLPPR3Q6T4P5 718 aa24.13■■□□□ 1.45
SHISA3-201ENST00000319234 CCDC136Q96JN2 1154 aa24.13■■□□□ 1.45
SHISA3-201ENST00000319234 HDGFL2Q7Z4V5 671 aaPredicted RBP24.12■■□□□ 1.45
SHISA3-201ENST00000319234 CPS1P31327 1500 aa24.12■■□□□ 1.45
SHISA3-201ENST00000319234 CABP1Q9NZU7 370 aa24.11■■□□□ 1.45
SHISA3-201ENST00000319234 WASLO00401 505 aaPredicted RBP24.11■■□□□ 1.45
SHISA3-201ENST00000319234 THEMISQ8N1K5 641 aaPredicted RBP24.11■■□□□ 1.45
SHISA3-201ENST00000319234 TNNT2P45379 298 aaPredicted RBP24.1■■□□□ 1.45
SHISA3-201ENST00000319234 MED14O60244 1454 aa24.09■■□□□ 1.45
SHISA3-201ENST00000319234 RRP1P56182 461 aaKnown RBP24.08■■□□□ 1.45
SHISA3-201ENST00000319234 ATP7BP35670 1465 aa24.06■■□□□ 1.44
SHISA3-201ENST00000319234 MTHFSP49914 203 aa24.05■■□□□ 1.44
SHISA3-201ENST00000319234 RCAN3Q9UKA8 241 aa24.05■■□□□ 1.44
SHISA3-201ENST00000319234 FYB1O15117 783 aa24.05■■□□□ 1.44
SHISA3-201ENST00000319234 CDCA7LQ96GN5 454 aa24.05■■□□□ 1.44
SHISA3-201ENST00000319234 CFAP53Q96M91 514 aa24.05■■□□□ 1.44
SHISA3-201ENST00000319234 ROBO2Q9HCK4 1378 aa24.05■■□□□ 1.44
SHISA3-201ENST00000319234 TBX22Q9Y458 520 aa24.03■■□□□ 1.44
SHISA3-201ENST00000319234 GGNBP2Q9H3C7 697 aa24.03■■□□□ 1.44
SHISA3-201ENST00000319234 CCDC146Q8IYE0 955 aa24.02■■□□□ 1.44
SHISA3-201ENST00000319234 SLC26A8Q96RN1 970 aa24.02■■□□□ 1.44
SHISA3-201ENST00000319234 ZNF521Q96K83 1311 aa24.02■■□□□ 1.44
SHISA3-201ENST00000319234 ERICH6Q7L0X2 663 aa24.02■■□□□ 1.43
SHISA3-201ENST00000319234 NUDT16Q96DE0 195 aaKnown RBP24.01■■□□□ 1.43
SHISA3-201ENST00000319234 SHPRHQ149N8 1683 aa24.01■■□□□ 1.43
SHISA3-201ENST00000319234 RIMS1Q86UR5 1692 aaKnown RBP24.01■■□□□ 1.43
SHISA3-201ENST00000319234 NGEFQ8N5V2 710 aa24■■□□□ 1.43
SHISA3-201ENST00000319234 ANKRD26Q9UPS8 1709 aa24■■□□□ 1.43
SHISA3-201ENST00000319234 PPIP5K1Q6PFW1 1433 aa24■■□□□ 1.43
SHISA3-201ENST00000319234 PTPRUQ92729 1446 aa23.99■■□□□ 1.43
SHISA3-201ENST00000319234 APAF1O14727 1248 aa23.98■■□□□ 1.43
SHISA3-201ENST00000319234 CCDC61Q9Y6R9 512 aa23.98■■□□□ 1.43
SHISA3-201ENST00000319234 CPSF1Q10570 1443 aaKnown RBP23.98■■□□□ 1.43
SHISA3-201ENST00000319234 DIP2AQ14689 1571 aa23.98■■□□□ 1.43
SHISA3-201ENST00000319234 CEP170BQ9Y4F5 1589 aaPredicted RBP23.98■■□□□ 1.43
SHISA3-201ENST00000319234 ADGRB2O60241 1585 aa23.97■■□□□ 1.43
SHISA3-201ENST00000319234 GOLGA2Q08379 1002 aa23.96■■□□□ 1.43
SHISA3-201ENST00000319234 AMOTL2Q9Y2J4 779 aa23.96■■□□□ 1.43
SHISA3-201ENST00000319234 ADAMTSL3P82987 1691 aa23.95■■□□□ 1.42
SHISA3-201ENST00000319234 KIF20BQ96Q89 1820 aa23.95■■□□□ 1.42
SHISA3-201ENST00000319234 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.94■■□□□ 1.42
SHISA3-201ENST00000319234 EDC4Q6P2E9 1401 aaKnown RBP23.94■■□□□ 1.42
SHISA3-201ENST00000319234 RUNDC1Q96C34 613 aa23.93■■□□□ 1.42
SHISA3-201ENST00000319234 CDC42BPGQ6DT37 1551 aa23.93■■□□□ 1.42
SHISA3-201ENST00000319234 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.92■■□□□ 1.42
SHISA3-201ENST00000319234 PTCH1Q13635 1447 aa23.92■■□□□ 1.42
SHISA3-201ENST00000319234 PRR36Q9H6K5 1346 aa23.92■■□□□ 1.42
SHISA3-201ENST00000319234 SLFN5Q08AF3 891 aa23.9■■□□□ 1.42
SHISA3-201ENST00000319234 DUSP27Q5VZP5 1158 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms