RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 STK31Q9BXU1 1019 aa11.83□□□□□ -0.52
TMEM39A-201ENST00000319172 ADGBQ8N7X0 1667 aa11.83□□□□□ -0.52
TMEM39A-201ENST00000319172 WASLO00401 505 aaPredicted RBP11.83□□□□□ -0.52
TMEM39A-201ENST00000319172 ZNF692Q9BU19 519 aaPredicted RBP11.83□□□□□ -0.52
TMEM39A-201ENST00000319172 ABCC1P33527 1531 aa11.82□□□□□ -0.52
TMEM39A-201ENST00000319172 ZMYM3Q14202 1370 aa11.82□□□□□ -0.52
TMEM39A-201ENST00000319172 CDC42BPAQ5VT25 1732 aa11.82□□□□□ -0.52
TMEM39A-201ENST00000319172 FBLN1P23142 703 aa11.82□□□□□ -0.52
TMEM39A-201ENST00000319172 NGEFQ8N5V2 710 aa11.82□□□□□ -0.52
TMEM39A-201ENST00000319172 NEO1Q92859 1461 aa11.82□□□□□ -0.52
TMEM39A-201ENST00000319172 LRRIQ1Q96JM4 1722 aa11.82□□□□□ -0.52
TMEM39A-201ENST00000319172 UHRF1BP1Q6BDS2 1440 aa11.81□□□□□ -0.52
TMEM39A-201ENST00000319172 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
TMEM39A-201ENST00000319172 NECTIN2Q92692 538 aa11.81□□□□□ -0.52
TMEM39A-201ENST00000319172 TSR2Q969E8 191 aaKnown RBP11.81□□□□□ -0.52
TMEM39A-201ENST00000319172 RWDD1Q9H446 243 aaPredicted RBP11.81□□□□□ -0.52
TMEM39A-201ENST00000319172 ZNF330Q9Y3S2 320 aaPredicted RBP11.81□□□□□ -0.52
TMEM39A-201ENST00000319172 NPATQ14207 1427 aa11.8□□□□□ -0.52
TMEM39A-201ENST00000319172 ZKSCAN2Q63HK3 967 aa11.8□□□□□ -0.52
TMEM39A-201ENST00000319172 ATP10AO60312 1499 aa11.8□□□□□ -0.52
TMEM39A-201ENST00000319172 SULT6B1Q6IMI4 303 aa11.8□□□□□ -0.52
TMEM39A-201ENST00000319172 OS9Q13438 667 aaPredicted RBP11.8□□□□□ -0.52
TMEM39A-201ENST00000319172 RIMS2Q9UQ26 1411 aa11.79□□□□□ -0.52
TMEM39A-201ENST00000319172 PANK1Q8TE04 598 aa11.79□□□□□ -0.52
TMEM39A-201ENST00000319172 CLASP1Q7Z460 1538 aa11.79□□□□□ -0.52
TMEM39A-201ENST00000319172 GPRASP1Q5JY77 1395 aa11.79□□□□□ -0.52
TMEM39A-201ENST00000319172 EMILIN1Q9Y6C2 1016 aa11.78□□□□□ -0.52
TMEM39A-201ENST00000319172 TEFQ10587 303 aa11.78□□□□□ -0.52
TMEM39A-201ENST00000319172 CCDC9Q9Y3X0 531 aaKnown RBP11.78□□□□□ -0.52
TMEM39A-201ENST00000319172 PER1O15534 1290 aaPredicted RBP11.78□□□□□ -0.52
TMEM39A-201ENST00000319172 BCAR3O75815 825 aa11.78□□□□□ -0.52
TMEM39A-201ENST00000319172 CARD14Q9BXL6 1004 aa11.78□□□□□ -0.52
TMEM39A-201ENST00000319172 EXOSC9Q06265 439 aaKnown RBP11.77□□□□□ -0.52
TMEM39A-201ENST00000319172 NPHP1O15259 732 aa11.77□□□□□ -0.53
TMEM39A-201ENST00000319172 C1orf141Q5JVX7 400 aa11.77□□□□□ -0.53
TMEM39A-201ENST00000319172 NLRP2Q9NX02 1062 aa11.77□□□□□ -0.53
TMEM39A-201ENST00000319172 ADCY10Q96PN6 1610 aa11.76□□□□□ -0.53
TMEM39A-201ENST00000319172 EIF2S2P20042 333 aaKnown RBP11.76□□□□□ -0.53
TMEM39A-201ENST00000319172 PLA2R1Q13018 1463 aa11.76□□□□□ -0.53
TMEM39A-201ENST00000319172 GNAI1P63096 354 aa11.76□□□□□ -0.53
TMEM39A-201ENST00000319172 UGGT1Q9NYU2 1555 aa11.76□□□□□ -0.53
TMEM39A-201ENST00000319172 NCKAP5LQ9HCH0 1330 aa11.76□□□□□ -0.53
TMEM39A-201ENST00000319172 DZIP1LQ8IYY4 767 aaKnown RBP11.75□□□□□ -0.53
TMEM39A-201ENST00000319172 DDRGK1Q96HY6 314 aa11.75□□□□□ -0.53
TMEM39A-201ENST00000319172 FOXO3O43524 673 aa11.75□□□□□ -0.53
TMEM39A-201ENST00000319172 WWC1Q8IX03 1113 aa11.75□□□□□ -0.53
TMEM39A-201ENST00000319172 THUMPD2Q9BTF0 503 aaKnown RBP11.75□□□□□ -0.53
TMEM39A-201ENST00000319172 EVA1CP58658 441 aa11.74□□□□□ -0.53
TMEM39A-201ENST00000319172 TSPYL4Q9UJ04 414 aa11.74□□□□□ -0.53
TMEM39A-201ENST00000319172 SPATA31E1Q6ZUB1 1445 aa11.74□□□□□ -0.53
TMEM39A-201ENST00000319172 FYB1O15117 783 aa11.74□□□□□ -0.53
TMEM39A-201ENST00000319172 SMG6Q86US8 1419 aaKnown RBP11.74□□□□□ -0.53
TMEM39A-201ENST00000319172 BECN1Q14457 450 aa11.74□□□□□ -0.53
TMEM39A-201ENST00000319172 MLH3Q9UHC1 1453 aa11.73□□□□□ -0.53
TMEM39A-201ENST00000319172 TSPOAP1O95153 1857 aa11.73□□□□□ -0.53
TMEM39A-201ENST00000319172 TMPOP42166 694 aaKnown RBP11.73□□□□□ -0.53
TMEM39A-201ENST00000319172 ZRANB1Q9UGI0 708 aa11.73□□□□□ -0.53
TMEM39A-201ENST00000319172 EIF2AK4Q9P2K8 1649 aaKnown RBP11.73□□□□□ -0.53
TMEM39A-201ENST00000319172 ACEP12821 1306 aa11.72□□□□□ -0.53
TMEM39A-201ENST00000319172 ZFYVE16Q7Z3T8 1539 aa11.72□□□□□ -0.53
TMEM39A-201ENST00000319172 PARD3Q8TEW0 1356 aa11.72□□□□□ -0.53
TMEM39A-201ENST00000319172 AEBP2Q6ZN18 517 aaPredicted RBP11.72□□□□□ -0.53
TMEM39A-201ENST00000319172 CENPQQ7L2Z9 268 aaPredicted RBP11.72□□□□□ -0.53
TMEM39A-201ENST00000319172 SLFN5Q08AF3 891 aa11.72□□□□□ -0.53
TMEM39A-201ENST00000319172 RAPGEF4Q8WZA2 1011 aa11.72□□□□□ -0.53
TMEM39A-201ENST00000319172 COL17A1Q9UMD9 1497 aaPredicted RBP11.71□□□□□ -0.53
TMEM39A-201ENST00000319172 ZC3H6P61129 1189 aaKnown RBP11.71□□□□□ -0.53
TMEM39A-201ENST00000319172 USP35Q9P2H5 1018 aa11.71□□□□□ -0.53
TMEM39A-201ENST00000319172 PHF8Q9UPP1 1060 aa11.71□□□□□ -0.53
TMEM39A-201ENST00000319172 CDC42BPBQ9Y5S2 1711 aa11.71□□□□□ -0.53
TMEM39A-201ENST00000319172 FCHSD2O94868 740 aa11.71□□□□□ -0.53
TMEM39A-201ENST00000319172 CASC1Q6TDU7 716 aa11.71□□□□□ -0.53
TMEM39A-201ENST00000319172 YTHDC2Q9H6S0 1430 aaKnown RBP11.71□□□□□ -0.54
TMEM39A-201ENST00000319172 DCTN1Q14203 1278 aa11.7□□□□□ -0.54
TMEM39A-201ENST00000319172 ANKRD36BQ8N2N9 1353 aa11.7□□□□□ -0.54
TMEM39A-201ENST00000319172 WDR63Q8IWG1 891 aa11.7□□□□□ -0.54
TMEM39A-201ENST00000319172 NOP58Q9Y2X3 529 aaKnown RBP11.7□□□□□ -0.54
TMEM39A-201ENST00000319172 DDX19BQ9UMR2 479 aa11.69□□□□□ -0.54
TMEM39A-201ENST00000319172 FKBP5Q13451 457 aaPredicted RBP11.69□□□□□ -0.54
TMEM39A-201ENST00000319172 KCNA6P17658 529 aa11.69□□□□□ -0.54
TMEM39A-201ENST00000319172 ASXL1Q8IXJ9 1541 aa11.69□□□□□ -0.54
TMEM39A-201ENST00000319172 KIF16BQ96L93 1317 aa11.68□□□□□ -0.54
TMEM39A-201ENST00000319172 HSPA2P54652 639 aa11.68□□□□□ -0.54
TMEM39A-201ENST00000319172 TWISTNBQ3B726 338 aaPredicted RBP11.68□□□□□ -0.54
TMEM39A-201ENST00000319172 GAS2L2Q8NHY3 880 aa11.68□□□□□ -0.54
TMEM39A-201ENST00000319172 CHMP4AQ9BY43 222 aa11.68□□□□□ -0.54
TMEM39A-201ENST00000319172 ANKRD45Q5TZF3 282 aa11.68□□□□□ -0.54
TMEM39A-201ENST00000319172 PDE4AP27815 886 aa11.67□□□□□ -0.54
TMEM39A-201ENST00000319172 LTKP29376 864 aa11.67□□□□□ -0.54
TMEM39A-201ENST00000319172 API5Q9BZZ5 524 aaKnown RBP11.67□□□□□ -0.54
TMEM39A-201ENST00000319172 PRDM15P57071 1507 aaPredicted RBP11.67□□□□□ -0.54
TMEM39A-201ENST00000319172 SHROOM2Q13796 1616 aa11.67□□□□□ -0.54
TMEM39A-201ENST00000319172 NFE2L2Q16236 605 aa11.67□□□□□ -0.54
TMEM39A-201ENST00000319172 C20orf194Q5TEA3 1177 aa11.67□□□□□ -0.54
TMEM39A-201ENST00000319172 USHBP1Q8N6Y0 703 aa11.67□□□□□ -0.54
TMEM39A-201ENST00000319172 SPRYD3Q8NCJ5 442 aa11.67□□□□□ -0.54
TMEM39A-201ENST00000319172 A0A1W2PP64 1363 aa11.67□□□□□ -0.54
TMEM39A-201ENST00000319172 CFAP74Q9C0B2 1584 aa11.67□□□□□ -0.54
TMEM39A-201ENST00000319172 HMMRO75330 724 aa11.67□□□□□ -0.54
TMEM39A-201ENST00000319172 PPIP5K1Q6PFW1 1433 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 308.4 ms