RNA–Protein interactions for RNA: ENST00000316757.3

APBA3-201, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APBA3, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-201ENST00000316757 TULP4Q9NRJ4 1543 aa31.31■■■□□ 2.6
APBA3-201ENST00000316757 ADAMTS8Q9UP79 889 aa31.3■■■□□ 2.6
APBA3-201ENST00000316757 SALL2Q9Y467 1007 aaPredicted RBP31.29■■■□□ 2.6
APBA3-201ENST00000316757 WDR43Q15061 677 aaKnown RBP eCLIP31.29■■■□□ 2.6
APBA3-201ENST00000316757 PUS7Q96PZ0 661 aaKnown RBP31.29■■■□□ 2.6
APBA3-201ENST00000316757 STK26Q9P289 416 aa31.29■■■□□ 2.6
APBA3-201ENST00000316757 TMEM2Q9UHN6 1383 aa31.28■■■□□ 2.6
APBA3-201ENST00000316757 HDGFP51858 240 aaKnown RBP31.28■■■□□ 2.6
APBA3-201ENST00000316757 RIMS1Q86UR5 1692 aaKnown RBP31.27■■■□□ 2.6
APBA3-201ENST00000316757 DLC1Q96QB1 1528 aa31.26■■■□□ 2.59
APBA3-201ENST00000316757 EVC2Q86UK5 1308 aa31.24■■■□□ 2.59
APBA3-201ENST00000316757 USP32Q8NFA0 1604 aa31.23■■■□□ 2.59
APBA3-201ENST00000316757 KNDC1Q76NI1 1749 aa31.22■■■□□ 2.59
APBA3-201ENST00000316757 NSD3Q9BZ95 1437 aa31.22■■■□□ 2.59
APBA3-201ENST00000316757 SLC12A5Q9H2X9 1139 aa31.21■■■□□ 2.59
APBA3-201ENST00000316757 SAFB2Q14151 953 aaKnown RBP eCLIP31.18■■■□□ 2.58
APBA3-201ENST00000316757 PRAM1Q96QH2 718 aa31.18■■■□□ 2.58
APBA3-201ENST00000316757 RCAN3Q9UKA8 241 aa31.18■■■□□ 2.58
APBA3-201ENST00000316757 ADAMTSL3P82987 1691 aa31.18■■■□□ 2.58
APBA3-201ENST00000316757 B4GALNT3Q6L9W6 998 aa31.18■■■□□ 2.58
APBA3-201ENST00000316757 CDCA7LQ96GN5 454 aa31.17■■■□□ 2.58
APBA3-201ENST00000316757 SLIT1O75093 1534 aa31.17■■■□□ 2.58
APBA3-201ENST00000316757 PLPPR3Q6T4P5 718 aa31.17■■■□□ 2.58
APBA3-201ENST00000316757 POGKQ9P215 609 aa31.17■■■□□ 2.58
APBA3-201ENST00000316757 ABCC11Q96J66 1382 aa31.14■■■□□ 2.58
APBA3-201ENST00000316757 ARHGAP23Q9P227 1491 aa31.14■■■□□ 2.57
APBA3-201ENST00000316757 RRP1P56182 461 aaKnown RBP31.13■■■□□ 2.57
APBA3-201ENST00000316757 METP08581 1390 aa31.13■■■□□ 2.57
APBA3-201ENST00000316757 PLEKHG1Q9ULL1 1385 aa31.12■■■□□ 2.57
APBA3-201ENST00000316757 POLR3AO14802 1390 aaPredicted RBP31.11■■■□□ 2.57
APBA3-201ENST00000316757 ANKRD36BQ8N2N9 1353 aa31.11■■■□□ 2.57
APBA3-201ENST00000316757 MINK1Q8N4C8 1332 aaPredicted RBP31.1■■■□□ 2.57
APBA3-201ENST00000316757 MORC1Q86VD1 984 aa31.09■■■□□ 2.57
APBA3-201ENST00000316757 CPS1P31327 1500 aa31.09■■■□□ 2.57
APBA3-201ENST00000316757 CEP170BQ9Y4F5 1589 aaPredicted RBP31.09■■■□□ 2.57
APBA3-201ENST00000316757 PLEKHH1Q9ULM0 1364 aa31.09■■■□□ 2.57
APBA3-201ENST00000316757 ADAMTS13Q76LX8 1427 aa31.08■■■□□ 2.57
APBA3-201ENST00000316757 NINLQ9Y2I6 1382 aa31.08■■■□□ 2.57
APBA3-201ENST00000316757 CABP2Q9NPB3 220 aa31.08■■■□□ 2.57
APBA3-201ENST00000316757 CGNL1Q0VF96 1302 aa31.08■■■□□ 2.57
APBA3-201ENST00000316757 TECPR2O15040 1411 aa31.07■■■□□ 2.56
APBA3-201ENST00000316757 LTKP29376 864 aa31.07■■■□□ 2.56
APBA3-201ENST00000316757 ZNF521Q96K83 1311 aa31.07■■■□□ 2.56
APBA3-201ENST00000316757 SRPK2P78362 688 aaKnown RBP31.05■■■□□ 2.56
APBA3-201ENST00000316757 EID1Q9Y6B2 187 aa31.05■■■□□ 2.56
APBA3-201ENST00000316757 ZNF142P52746 1687 aaPredicted RBP31.05■■■□□ 2.56
APBA3-201ENST00000316757 NSD2O96028 1365 aa31.05■■■□□ 2.56
APBA3-201ENST00000316757 ATAD2Q6PL18 1390 aa31.05■■■□□ 2.56
APBA3-201ENST00000316757 TXNDC2Q86VQ3 553 aa31.04■■■□□ 2.56
APBA3-201ENST00000316757 THEMISQ8N1K5 641 aaPredicted RBP31.03■■■□□ 2.56
APBA3-201ENST00000316757 RBM19Q9Y4C8 960 aaKnown RBP31.03■■■□□ 2.56
APBA3-201ENST00000316757 FAM135BQ49AJ0 1406 aa31.02■■■□□ 2.56
APBA3-201ENST00000316757 SHPRHQ149N8 1683 aa31.01■■■□□ 2.56
APBA3-201ENST00000316757 MED14O60244 1454 aa31.01■■■□□ 2.56
APBA3-201ENST00000316757 CCDC136Q96JN2 1154 aa31.01■■■□□ 2.56
APBA3-201ENST00000316757 WAPLQ7Z5K2 1190 aa31.01■■■□□ 2.55
APBA3-201ENST00000316757 SETD1BQ9UPS6 1966 aaKnown RBP31■■■□□ 2.55
APBA3-201ENST00000316757 CCDC146Q8IYE0 955 aa30.99■■■□□ 2.55
APBA3-201ENST00000316757 GOLGA2Q08379 1002 aa30.99■■■□□ 2.55
APBA3-201ENST00000316757 DIP2AQ14689 1571 aa30.98■■■□□ 2.55
APBA3-201ENST00000316757 NGEFQ8N5V2 710 aa30.97■■■□□ 2.55
APBA3-201ENST00000316757 SIRT1Q96EB6 747 aa30.97■■■□□ 2.55
APBA3-201ENST00000316757 CDK19Q9BWU1 502 aa30.96■■■□□ 2.55
APBA3-201ENST00000316757 DUSP27Q5VZP5 1158 aa30.95■■■□□ 2.55
APBA3-201ENST00000316757 A0A1W2PP64 1363 aa30.95■■■□□ 2.55
APBA3-201ENST00000316757 APAF1O14727 1248 aa30.94■■■□□ 2.54
APBA3-201ENST00000316757 TNNT2P45379 298 aaPredicted RBP30.93■■■□□ 2.54
APBA3-201ENST00000316757 ANKRD26Q9UPS8 1709 aa30.91■■■□□ 2.54
APBA3-201ENST00000316757 SLFN5Q08AF3 891 aa30.91■■■□□ 2.54
APBA3-201ENST00000316757 EXOC6Q8TAG9 804 aa30.91■■■□□ 2.54
APBA3-201ENST00000316757 CD163L1Q9NR16 1453 aa30.91■■■□□ 2.54
APBA3-201ENST00000316757 TERF2IPQ9NYB0 399 aa30.89■■■□□ 2.54
APBA3-201ENST00000316757 ADGRB2O60241 1585 aa30.89■■■□□ 2.54
APBA3-201ENST00000316757 CFAP53Q96M91 514 aa30.89■■■□□ 2.54
APBA3-201ENST00000316757 MTHFSP49914 203 aa30.88■■■□□ 2.53
APBA3-201ENST00000316757 TRMT2AQ8IZ69 625 aaKnown RBP30.88■■■□□ 2.53
APBA3-201ENST00000316757 SLC26A8Q96RN1 970 aa30.88■■■□□ 2.53
APBA3-201ENST00000316757 ROBO2Q9HCK4 1378 aa30.88■■■□□ 2.53
APBA3-201ENST00000316757 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.87■■■□□ 2.53
APBA3-201ENST00000316757 KIF20BQ96Q89 1820 aa30.87■■■□□ 2.53
APBA3-201ENST00000316757 PTPRUQ92729 1446 aa30.86■■■□□ 2.53
APBA3-201ENST00000316757 TBX22Q9Y458 520 aa30.86■■■□□ 2.53
APBA3-201ENST00000316757 WASLO00401 505 aaPredicted RBP30.85■■■□□ 2.53
APBA3-201ENST00000316757 ATP7BP35670 1465 aa30.85■■■□□ 2.53
APBA3-201ENST00000316757 XRN1Q8IZH2 1706 aaKnown RBP30.83■■■□□ 2.53
APBA3-201ENST00000316757 E9PSI1 815 aa30.81■■■□□ 2.52
APBA3-201ENST00000316757 PLIN1O60240 522 aa30.81■■■□□ 2.52
APBA3-201ENST00000316757 HDGFL2Q7Z4V5 671 aaPredicted RBP30.81■■■□□ 2.52
APBA3-201ENST00000316757 RUNDC1Q96C34 613 aa30.81■■■□□ 2.52
APBA3-201ENST00000316757 CABP1Q9NZU7 370 aa30.8■■■□□ 2.52
APBA3-201ENST00000316757 PTCH1Q13635 1447 aa30.8■■■□□ 2.52
APBA3-201ENST00000316757 ITSN1Q15811 1721 aa30.8■■■□□ 2.52
APBA3-201ENST00000316757 NKTRP30414 1462 aaKnown RBP30.79■■■□□ 2.52
APBA3-201ENST00000316757 IQSEC2Q5JU85 1478 aa30.79■■■□□ 2.52
APBA3-201ENST00000316757 AKAP12Q02952 1782 aa30.77■■■□□ 2.52
APBA3-201ENST00000316757 SPINK5Q9NQ38 1064 aaPredicted RBP30.77■■■□□ 2.52
APBA3-201ENST00000316757 PPIP5K1Q6PFW1 1433 aa30.77■■■□□ 2.52
APBA3-201ENST00000316757 MON2Q7Z3U7 1717 aa30.76■■■□□ 2.51
APBA3-201ENST00000316757 FYB1O15117 783 aa30.76■■■□□ 2.51
APBA3-201ENST00000316757 GGNBP2Q9H3C7 697 aa30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms