RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 E9PSI1 815 aa19.18■□□□□ 0.66
TFE3-201ENST00000315869 CENPJQ9HC77 1338 aaPredicted RBP19.18■□□□□ 0.66
TFE3-201ENST00000315869 ABCC3O15438 1527 aa19.18■□□□□ 0.66
TFE3-201ENST00000315869 SCAF11Q99590 1463 aaKnown RBP19.17■□□□□ 0.66
TFE3-201ENST00000315869 ZMYM4Q5VZL5 1548 aa19.17■□□□□ 0.66
TFE3-201ENST00000315869 SLC12A5Q9H2X9 1139 aa19.17■□□□□ 0.66
TFE3-201ENST00000315869 ESF1Q9H501 851 aaKnown RBP19.17■□□□□ 0.66
TFE3-201ENST00000315869 MROH2AA6NES4 1674 aa19.17■□□□□ 0.66
TFE3-201ENST00000315869 CFAP74Q9C0B2 1584 aa19.17■□□□□ 0.66
TFE3-201ENST00000315869 IGHDP01880 384 aa19.16■□□□□ 0.66
TFE3-201ENST00000315869 EIF2AK4Q9P2K8 1649 aaKnown RBP19.15■□□□□ 0.66
TFE3-201ENST00000315869 SPRYD3Q8NCJ5 442 aa19.14■□□□□ 0.65
TFE3-201ENST00000315869 EIF3AQ14152 1382 aaKnown RBP19.14■□□□□ 0.65
TFE3-201ENST00000315869 DIP2BQ9P265 1576 aa19.14■□□□□ 0.65
TFE3-201ENST00000315869 MAP3K4Q9Y6R4 1608 aa19.13■□□□□ 0.65
TFE3-201ENST00000315869 CABP2Q9NPB3 220 aa19.13■□□□□ 0.65
TFE3-201ENST00000315869 CEBPAP49715 358 aaPredicted RBP19.12■□□□□ 0.65
TFE3-201ENST00000315869 MINK1Q8N4C8 1332 aaPredicted RBP19.12■□□□□ 0.65
TFE3-201ENST00000315869 C14orf93Q9H972 538 aaKnown RBP19.12■□□□□ 0.65
TFE3-201ENST00000315869 RICTORQ6R327 1708 aa19.11■□□□□ 0.65
TFE3-201ENST00000315869 KIF1BO60333 1816 aa19.11■□□□□ 0.65
TFE3-201ENST00000315869 VGFO15240 615 aaPredicted RBP19.11■□□□□ 0.65
TFE3-201ENST00000315869 CARD14Q9BXL6 1004 aa19.11■□□□□ 0.65
TFE3-201ENST00000315869 EIF5BO60841 1220 aaKnown RBP19.1■□□□□ 0.65
TFE3-201ENST00000315869 UPF2Q9HAU5 1272 aaKnown RBP19.1■□□□□ 0.65
TFE3-201ENST00000315869 ZNF521Q96K83 1311 aa19.1■□□□□ 0.65
TFE3-201ENST00000315869 SIGLEC1Q9BZZ2 1709 aa19.1■□□□□ 0.65
TFE3-201ENST00000315869 WWC1Q8IX03 1113 aa19.09■□□□□ 0.65
TFE3-201ENST00000315869 CGNL1Q0VF96 1302 aa19.09■□□□□ 0.65
TFE3-201ENST00000315869 TNNQ9UQP3 1299 aa19.08■□□□□ 0.65
TFE3-201ENST00000315869 BECN1Q14457 450 aa19.07■□□□□ 0.64
TFE3-201ENST00000315869 TCP11L2Q8N4U5 519 aa19.07■□□□□ 0.64
TFE3-201ENST00000315869 SEC24BO95487 1268 aa19.07■□□□□ 0.64
TFE3-201ENST00000315869 U2AF1L5P0DN76 240 aaPredicted RBP19.07■□□□□ 0.64
TFE3-201ENST00000315869 SRPK2P78362 688 aaKnown RBP19.07■□□□□ 0.64
TFE3-201ENST00000315869 U2AF1Q01081 240 aaKnown RBP eCLIP19.07■□□□□ 0.64
TFE3-201ENST00000315869 NKTRP30414 1462 aaKnown RBP19.07■□□□□ 0.64
TFE3-201ENST00000315869 POGKQ9P215 609 aa19.07■□□□□ 0.64
TFE3-201ENST00000315869 PLEKHG5O94827 1062 aa19.06■□□□□ 0.64
TFE3-201ENST00000315869 ASXL1Q8IXJ9 1541 aa19.06■□□□□ 0.64
TFE3-201ENST00000315869 U2SURPO15042 1029 aaKnown RBP19.05■□□□□ 0.64
TFE3-201ENST00000315869 STAC3Q96MF2 364 aa19.05■□□□□ 0.64
TFE3-201ENST00000315869 LMTK2Q8IWU2 1503 aa19.05■□□□□ 0.64
TFE3-201ENST00000315869 CAMSAP1Q5T5Y3 1602 aa19.05■□□□□ 0.64
TFE3-201ENST00000315869 FTSJ3Q8IY81 847 aaKnown RBP19.05■□□□□ 0.64
TFE3-201ENST00000315869 SYNMO15061 1565 aa19.05■□□□□ 0.64
TFE3-201ENST00000315869 PRAM1Q96QH2 718 aa19.05■□□□□ 0.64
TFE3-201ENST00000315869 SLC52A1Q9NWF4 448 aa19.05■□□□□ 0.64
TFE3-201ENST00000315869 MTHFSP49914 203 aa19.04■□□□□ 0.64
TFE3-201ENST00000315869 CFAP53Q96M91 514 aa19.04■□□□□ 0.64
TFE3-201ENST00000315869 INSRP06213 1382 aa19.04■□□□□ 0.64
TFE3-201ENST00000315869 WAPLQ7Z5K2 1190 aa19.04■□□□□ 0.64
TFE3-201ENST00000315869 ADGRB3O60242 1522 aa19.04■□□□□ 0.64
TFE3-201ENST00000315869 PDE3AQ14432 1141 aa19.03■□□□□ 0.64
TFE3-201ENST00000315869 ERVK-7P63135 1459 aa19.02■□□□□ 0.64
TFE3-201ENST00000315869 PIK3C2GO75747 1445 aa19.02■□□□□ 0.63
TFE3-201ENST00000315869 RUNDC1Q96C34 613 aa19.01■□□□□ 0.63
TFE3-201ENST00000315869 MAPK8IP3Q9UPT6 1336 aa19.01■□□□□ 0.63
TFE3-201ENST00000315869 IQGAP1P46940 1657 aa19.01■□□□□ 0.63
TFE3-201ENST00000315869 NUTM2FA1L443 756 aa19■□□□□ 0.63
TFE3-201ENST00000315869 MYOM2P54296 1465 aa19■□□□□ 0.63
TFE3-201ENST00000315869 SLC24A1O60721 1099 aa19■□□□□ 0.63
TFE3-201ENST00000315869 GLI2P10070 1586 aa19■□□□□ 0.63
TFE3-201ENST00000315869 TRMT2AQ8IZ69 625 aaKnown RBP19■□□□□ 0.63
TFE3-201ENST00000315869 RLBP1P12271 317 aa18.99■□□□□ 0.63
TFE3-201ENST00000315869 PDZRN3Q9UPQ7 1066 aa18.99■□□□□ 0.63
TFE3-201ENST00000315869 RARSP54136 660 aaKnown RBP18.99■□□□□ 0.63
TFE3-201ENST00000315869 PMFBP1Q8TBY8 1022 aa18.99■□□□□ 0.63
TFE3-201ENST00000315869 PCDHB15Q9Y5E8 787 aa18.99■□□□□ 0.63
TFE3-201ENST00000315869 RPGRIP1LQ68CZ1 1315 aa18.98■□□□□ 0.63
TFE3-201ENST00000315869 PRKCSHP14314 528 aaPredicted RBP18.98■□□□□ 0.63
TFE3-201ENST00000315869 NSD3Q9BZ95 1437 aa18.98■□□□□ 0.63
TFE3-201ENST00000315869 TSR2Q969E8 191 aaKnown RBP18.97■□□□□ 0.63
TFE3-201ENST00000315869 GZF1Q9H116 711 aaPredicted RBP18.97■□□□□ 0.63
TFE3-201ENST00000315869 RWDD1Q9H446 243 aaPredicted RBP18.96■□□□□ 0.63
TFE3-201ENST00000315869 LAMC1P11047 1609 aa18.96■□□□□ 0.63
TFE3-201ENST00000315869 FBLN1P23142 703 aa18.96■□□□□ 0.63
TFE3-201ENST00000315869 MFAP1P55081 439 aaKnown RBP18.96■□□□□ 0.63
TFE3-201ENST00000315869 TXNDC2Q86VQ3 553 aa18.95■□□□□ 0.62
TFE3-201ENST00000315869 SMC4Q9NTJ3 1288 aa18.95■□□□□ 0.62
TFE3-201ENST00000315869 MYO5BQ9ULV0 1848 aa18.95■□□□□ 0.62
TFE3-201ENST00000315869 GGNBP2Q9H3C7 697 aa18.94■□□□□ 0.62
TFE3-201ENST00000315869 ITPRIPQ8IWB1 547 aa18.94■□□□□ 0.62
TFE3-201ENST00000315869 NCKAP5LQ9HCH0 1330 aa18.94■□□□□ 0.62
TFE3-201ENST00000315869 ZMYM3Q14202 1370 aa18.93■□□□□ 0.62
TFE3-201ENST00000315869 MYH16Q9H6N6 1097 aa18.93■□□□□ 0.62
TFE3-201ENST00000315869 EVC2Q86UK5 1308 aa18.93■□□□□ 0.62
TFE3-201ENST00000315869 NGEFQ8N5V2 710 aa18.93■□□□□ 0.62
TFE3-201ENST00000315869 PIK3C2BO00750 1634 aa18.92■□□□□ 0.62
TFE3-201ENST00000315869 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.92■□□□□ 0.62
TFE3-201ENST00000315869 CLTCQ00610 1675 aaKnown RBP18.91■□□□□ 0.62
TFE3-201ENST00000315869 NEXMIFQ5QGS0 1516 aa18.91■□□□□ 0.62
TFE3-201ENST00000315869 PPLO60437 1756 aa18.91■□□□□ 0.62
TFE3-201ENST00000315869 NRXN1Q9ULB1 1477 aa18.91■□□□□ 0.62
TFE3-201ENST00000315869 SLC26A8Q96RN1 970 aa18.9■□□□□ 0.62
TFE3-201ENST00000315869 ARHGAP31Q2M1Z3 1444 aa18.9■□□□□ 0.62
TFE3-201ENST00000315869 ZKSCAN2Q63HK3 967 aa18.9■□□□□ 0.62
TFE3-201ENST00000315869 NPC1L1Q9UHC9 1359 aa18.9■□□□□ 0.62
TFE3-201ENST00000315869 ADGRB1O14514 1584 aa18.9■□□□□ 0.62
TFE3-201ENST00000315869 KIF13AQ9H1H9 1805 aa18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms