RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 MORC1Q86VD1 984 aa20.61■□□□□ 0.89
TSC22D3-201ENST00000315660 USP32Q8NFA0 1604 aa20.61■□□□□ 0.89
TSC22D3-201ENST00000315660 GOLGA2Q08379 1002 aa20.6■□□□□ 0.89
TSC22D3-201ENST00000315660 PPP6R1Q9UPN7 881 aa20.59■□□□□ 0.89
TSC22D3-201ENST00000315660 PLIN1O60240 522 aa20.58■□□□□ 0.88
TSC22D3-201ENST00000315660 ANKRD36BQ8N2N9 1353 aa20.57■□□□□ 0.88
TSC22D3-201ENST00000315660 CGNL1Q0VF96 1302 aa20.57■□□□□ 0.88
TSC22D3-201ENST00000315660 APAF1O14727 1248 aa20.57■□□□□ 0.88
TSC22D3-201ENST00000315660 NGEFQ8N5V2 710 aa20.57■□□□□ 0.88
TSC22D3-201ENST00000315660 STK26Q9P289 416 aa20.57■□□□□ 0.88
TSC22D3-201ENST00000315660 SLFN5Q08AF3 891 aa20.56■□□□□ 0.88
TSC22D3-201ENST00000315660 SAFB2Q14151 953 aaKnown RBP eCLIP20.56■□□□□ 0.88
TSC22D3-201ENST00000315660 SENP3Q9H4L4 574 aaPredicted RBP20.56■□□□□ 0.88
TSC22D3-201ENST00000315660 CABP2Q9NPB3 220 aa20.56■□□□□ 0.88
TSC22D3-201ENST00000315660 PTPRMP28827 1452 aa20.55■□□□□ 0.88
TSC22D3-201ENST00000315660 TNNT2P45379 298 aaPredicted RBP20.54■□□□□ 0.88
TSC22D3-201ENST00000315660 YTHDC2Q9H6S0 1430 aaKnown RBP20.53■□□□□ 0.88
TSC22D3-201ENST00000315660 TRMT2AQ8IZ69 625 aaKnown RBP20.53■□□□□ 0.88
TSC22D3-201ENST00000315660 STAG3Q9UJ98 1225 aa20.53■□□□□ 0.88
TSC22D3-201ENST00000315660 CLTCQ00610 1675 aaKnown RBP20.53■□□□□ 0.88
TSC22D3-201ENST00000315660 NSD2O96028 1365 aa20.52■□□□□ 0.88
TSC22D3-201ENST00000315660 SHPRHQ149N8 1683 aa20.52■□□□□ 0.88
TSC22D3-201ENST00000315660 NINLQ9Y2I6 1382 aa20.52■□□□□ 0.87
TSC22D3-201ENST00000315660 ALKQ9UM73 1620 aa20.51■□□□□ 0.87
TSC22D3-201ENST00000315660 CRBNQ96SW2 442 aa20.51■□□□□ 0.87
TSC22D3-201ENST00000315660 SPATA31D1Q6ZQQ2 1576 aa20.5■□□□□ 0.87
TSC22D3-201ENST00000315660 PRAM1Q96QH2 718 aa20.5■□□□□ 0.87
TSC22D3-201ENST00000315660 SRPK2P78362 688 aaKnown RBP20.5■□□□□ 0.87
TSC22D3-201ENST00000315660 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.5■□□□□ 0.87
TSC22D3-201ENST00000315660 SPINK5Q9NQ38 1064 aaPredicted RBP20.49■□□□□ 0.87
TSC22D3-201ENST00000315660 MTHFSP49914 203 aa20.48■□□□□ 0.87
TSC22D3-201ENST00000315660 CFAP53Q96M91 514 aa20.48■□□□□ 0.87
TSC22D3-201ENST00000315660 POGKQ9P215 609 aa20.48■□□□□ 0.87
TSC22D3-201ENST00000315660 MINK1Q8N4C8 1332 aaPredicted RBP20.48■□□□□ 0.87
TSC22D3-201ENST00000315660 A2ML1A8K2U0 1454 aa20.48■□□□□ 0.87
TSC22D3-201ENST00000315660 ARHGEF40Q8TER5 1519 aa20.48■□□□□ 0.87
TSC22D3-201ENST00000315660 E9PSI1 815 aa20.47■□□□□ 0.87
TSC22D3-201ENST00000315660 MLECQ14165 292 aa20.47■□□□□ 0.87
TSC22D3-201ENST00000315660 NOP58Q9Y2X3 529 aaKnown RBP20.47■□□□□ 0.87
TSC22D3-201ENST00000315660 A0A1W2PP64 1363 aa20.47■□□□□ 0.87
TSC22D3-201ENST00000315660 ATAD2Q6PL18 1390 aa20.47■□□□□ 0.87
TSC22D3-201ENST00000315660 C20orf194Q5TEA3 1177 aa20.47■□□□□ 0.87
TSC22D3-201ENST00000315660 NKTRP30414 1462 aaKnown RBP20.47■□□□□ 0.87
TSC22D3-201ENST00000315660 ABCC11Q96J66 1382 aa20.46■□□□□ 0.87
TSC22D3-201ENST00000315660 RUNDC1Q96C34 613 aa20.45■□□□□ 0.86
TSC22D3-201ENST00000315660 DMRT2Q9Y5R5 561 aa20.45■□□□□ 0.86
TSC22D3-201ENST00000315660 RIMS2Q9UQ26 1411 aa20.44■□□□□ 0.86
TSC22D3-201ENST00000315660 KIF13AQ9H1H9 1805 aa20.44■□□□□ 0.86
TSC22D3-201ENST00000315660 WWC1Q8IX03 1113 aa20.43■□□□□ 0.86
TSC22D3-201ENST00000315660 IQSEC2Q5JU85 1478 aa20.42■□□□□ 0.86
TSC22D3-201ENST00000315660 TERF2IPQ9NYB0 399 aa20.42■□□□□ 0.86
TSC22D3-201ENST00000315660 TCERG1O14776 1098 aaKnown RBP20.41■□□□□ 0.86
TSC22D3-201ENST00000315660 CD163L1Q9NR16 1453 aa20.41■□□□□ 0.86
TSC22D3-201ENST00000315660 DLC1Q96QB1 1528 aa20.4■□□□□ 0.86
TSC22D3-201ENST00000315660 TCP11L2Q8N4U5 519 aa20.39■□□□□ 0.86
TSC22D3-201ENST00000315660 CDK19Q9BWU1 502 aa20.39■□□□□ 0.86
TSC22D3-201ENST00000315660 ANP32AP39687 249 aaKnown RBP20.39■□□□□ 0.85
TSC22D3-201ENST00000315660 ESF1Q9H501 851 aaKnown RBP20.38■□□□□ 0.85
TSC22D3-201ENST00000315660 PHF23Q9BUL5 403 aaPredicted RBP20.38■□□□□ 0.85
TSC22D3-201ENST00000315660 GGNBP2Q9H3C7 697 aa20.38■□□□□ 0.85
TSC22D3-201ENST00000315660 SETD1AO15047 1707 aaKnown RBP20.38■□□□□ 0.85
TSC22D3-201ENST00000315660 ZMYM3Q14202 1370 aa20.37■□□□□ 0.85
TSC22D3-201ENST00000315660 RRP7AQ9Y3A4 280 aaKnown RBP20.37■□□□□ 0.85
TSC22D3-201ENST00000315660 MED14O60244 1454 aa20.37■□□□□ 0.85
TSC22D3-201ENST00000315660 NEUROD2Q15784 382 aa20.37■□□□□ 0.85
TSC22D3-201ENST00000315660 FYB1O15117 783 aa20.36■□□□□ 0.85
TSC22D3-201ENST00000315660 NLRP1Q9C000 1473 aa20.36■□□□□ 0.85
TSC22D3-201ENST00000315660 BCAR3O75815 825 aa20.35■□□□□ 0.85
TSC22D3-201ENST00000315660 HDGFL2Q7Z4V5 671 aaPredicted RBP20.35■□□□□ 0.85
TSC22D3-201ENST00000315660 PAK3O75914 559 aaPredicted RBP20.35■□□□□ 0.85
TSC22D3-201ENST00000315660 DEKP35659 375 aaKnown RBP20.35■□□□□ 0.85
TSC22D3-201ENST00000315660 ANKRD26Q9UPS8 1709 aa20.34■□□□□ 0.85
TSC22D3-201ENST00000315660 MS4A1P11836 297 aa20.34■□□□□ 0.85
TSC22D3-201ENST00000315660 WAPLQ7Z5K2 1190 aa20.34■□□□□ 0.85
TSC22D3-201ENST00000315660 U2AF1L5P0DN76 240 aaPredicted RBP20.34■□□□□ 0.85
TSC22D3-201ENST00000315660 U2AF1Q01081 240 aaKnown RBP eCLIP20.34■□□□□ 0.85
TSC22D3-201ENST00000315660 CCDC27Q2M243 656 aa20.34■□□□□ 0.85
TSC22D3-201ENST00000315660 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.34■□□□□ 0.85
TSC22D3-201ENST00000315660 IPO9Q96P70 1041 aaKnown RBP20.34■□□□□ 0.85
TSC22D3-201ENST00000315660 CABP1Q9NZU7 370 aa20.34■□□□□ 0.85
TSC22D3-201ENST00000315660 NRXN3Q9Y4C0 1643 aa20.33■□□□□ 0.84
TSC22D3-201ENST00000315660 NCBP3Q53F19 620 aaKnown RBP20.33■□□□□ 0.84
TSC22D3-201ENST00000315660 WDR63Q8IWG1 891 aa20.33■□□□□ 0.84
TSC22D3-201ENST00000315660 KDM2BQ8NHM5 1336 aa20.33■□□□□ 0.84
TSC22D3-201ENST00000315660 COL3A1P02461 1466 aaPredicted RBP20.31■□□□□ 0.84
TSC22D3-201ENST00000315660 CENPQQ7L2Z9 268 aaPredicted RBP20.3■□□□□ 0.84
TSC22D3-201ENST00000315660 ADGRB2O60241 1585 aa20.3■□□□□ 0.84
TSC22D3-201ENST00000315660 HDGFP51858 240 aaKnown RBP20.29■□□□□ 0.84
TSC22D3-201ENST00000315660 NBR1Q14596 966 aa20.29■□□□□ 0.84
TSC22D3-201ENST00000315660 METP08581 1390 aa20.29■□□□□ 0.84
TSC22D3-201ENST00000315660 TNRQ92752 1358 aa20.29■□□□□ 0.84
TSC22D3-201ENST00000315660 ATP7BP35670 1465 aa20.28■□□□□ 0.84
TSC22D3-201ENST00000315660 KIF20BQ96Q89 1820 aa20.27■□□□□ 0.84
TSC22D3-201ENST00000315660 PDE4AP27815 886 aa20.27■□□□□ 0.84
TSC22D3-201ENST00000315660 U2SURPO15042 1029 aaKnown RBP20.26■□□□□ 0.83
TSC22D3-201ENST00000315660 CANXP27824 592 aaKnown RBP20.26■□□□□ 0.83
TSC22D3-201ENST00000315660 PDE3AQ14432 1141 aa20.26■□□□□ 0.83
TSC22D3-201ENST00000315660 ZBTB47Q9UFB7 747 aaPredicted RBP20.26■□□□□ 0.83
TSC22D3-201ENST00000315660 SKAP1Q86WV1 359 aa20.25■□□□□ 0.83
TSC22D3-201ENST00000315660 PLEKHF1Q96S99 279 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms