RNA–Protein interactions for RNA: ENST00000312734.8

CGREF1-202, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CGREF1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-202ENST00000312734 TMF1P82094 1093 aa38.08■■■■□ 3.69
CGREF1-202ENST00000312734 NKTRP30414 1462 aaKnown RBP38.06■■■■□ 3.68
CGREF1-202ENST00000312734 SBNO2Q9Y2G9 1366 aa38.05■■■■□ 3.68
CGREF1-202ENST00000312734 DISP3Q9P2K9 1392 aa38.03■■■■□ 3.68
CGREF1-202ENST00000312734 SLC24A1O60721 1099 aa38.02■■■■□ 3.68
CGREF1-202ENST00000312734 POLR3GLQ9BT43 218 aa38.02■■■■□ 3.68
CGREF1-202ENST00000312734 C14orf37Q86TY3 774 aa38.01■■■■□ 3.68
CGREF1-202ENST00000312734 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.01■■■■□ 3.68
CGREF1-202ENST00000312734 EVC2Q86UK5 1308 aa37.99■■■■□ 3.67
CGREF1-202ENST00000312734 TMEM94Q12767 1356 aa37.98■■■■□ 3.67
CGREF1-202ENST00000312734 CDK19Q9BWU1 502 aa37.96■■■■□ 3.67
CGREF1-202ENST00000312734 KIF7Q2M1P5 1343 aa37.95■■■■□ 3.67
CGREF1-202ENST00000312734 WASHC2AQ641Q2 1341 aa37.95■■■■□ 3.67
CGREF1-202ENST00000312734 WASLO00401 505 aaPredicted RBP37.94■■■■□ 3.66
CGREF1-202ENST00000312734 CABP2Q9NPB3 220 aa37.94■■■■□ 3.66
CGREF1-202ENST00000312734 TULP4Q9NRJ4 1543 aa37.94■■■■□ 3.66
CGREF1-202ENST00000312734 SRPK2P78362 688 aaKnown RBP37.93■■■■□ 3.66
CGREF1-202ENST00000312734 LRRC7Q96NW7 1537 aa37.92■■■■□ 3.66
CGREF1-202ENST00000312734 CCDC7Q96M83 1385 aa37.91■■■■□ 3.66
CGREF1-202ENST00000312734 CDCA8Q53HL2 280 aa37.91■■■■□ 3.66
CGREF1-202ENST00000312734 ADGRL3Q9HAR2 1447 aa37.88■■■■□ 3.65
CGREF1-202ENST00000312734 NALCNQ8IZF0 1738 aa37.87■■■■□ 3.65
CGREF1-202ENST00000312734 NUTM2FA1L443 756 aa37.86■■■■□ 3.65
CGREF1-202ENST00000312734 C19orf44Q9H6X5 657 aa37.85■■■■□ 3.65
CGREF1-202ENST00000312734 ADGRB2O60241 1585 aa37.85■■■■□ 3.65
CGREF1-202ENST00000312734 NCOA3Q9Y6Q9 1424 aa37.85■■■■□ 3.65
CGREF1-202ENST00000312734 LTBP4Q8N2S1 1624 aa37.84■■■■□ 3.65
CGREF1-202ENST00000312734 XIRP1Q702N8 1843 aaKnown RBP37.8■■■■□ 3.64
CGREF1-202ENST00000312734 PUS7Q96PZ0 661 aaKnown RBP37.79■■■■□ 3.64
CGREF1-202ENST00000312734 NUDT16Q96DE0 195 aaKnown RBP37.78■■■■□ 3.64
CGREF1-202ENST00000312734 MSH6P52701 1360 aa37.77■■■■□ 3.64
CGREF1-202ENST00000312734 DDX10Q13206 875 aaKnown RBP37.76■■■■□ 3.64
CGREF1-202ENST00000312734 TMC1Q8TDI8 760 aa37.76■■■■□ 3.64
CGREF1-202ENST00000312734 ATF3P18847 181 aa37.76■■■■□ 3.63
CGREF1-202ENST00000312734 CDC42BPGQ6DT37 1551 aa37.75■■■■□ 3.63
CGREF1-202ENST00000312734 PRR36Q9H6K5 1346 aa37.74■■■■□ 3.63
CGREF1-202ENST00000312734 ATAD2Q6PL18 1390 aa37.73■■■■□ 3.63
CGREF1-202ENST00000312734 SLC12A5Q9H2X9 1139 aa37.71■■■■□ 3.63
CGREF1-202ENST00000312734 CCDC61Q9Y6R9 512 aa37.69■■■■□ 3.62
CGREF1-202ENST00000312734 FMN2Q9NZ56 1722 aa37.69■■■■□ 3.62
CGREF1-202ENST00000312734 CADPS2Q86UW7 1296 aa37.69■■■■□ 3.62
CGREF1-202ENST00000312734 CABP1Q9NZU7 370 aa37.69■■■■□ 3.62
CGREF1-202ENST00000312734 ATP7BP35670 1465 aa37.67■■■■□ 3.62
CGREF1-202ENST00000312734 DCCP43146 1447 aa37.66■■■■□ 3.62
CGREF1-202ENST00000312734 USP32Q8NFA0 1604 aa37.63■■■■□ 3.61
CGREF1-202ENST00000312734 PPIP5K1Q6PFW1 1433 aa37.63■■■■□ 3.61
CGREF1-202ENST00000312734 ANKARQ7Z5J8 1434 aa37.63■■■■□ 3.61
CGREF1-202ENST00000312734 PANK3Q9H999 370 aa37.61■■■■□ 3.61
CGREF1-202ENST00000312734 RGPD8O14715 1765 aaPredicted RBP37.6■■■■□ 3.61
CGREF1-202ENST00000312734 MYOM1P52179 1685 aa37.6■■■■□ 3.61
CGREF1-202ENST00000312734 ESCO1Q5FWF5 840 aa37.6■■■■□ 3.61
CGREF1-202ENST00000312734 PMFBP1Q8TBY8 1022 aa37.6■■■■□ 3.61
CGREF1-202ENST00000312734 MST1RQ04912 1400 aa37.58■■■■□ 3.61
CGREF1-202ENST00000312734 ORAI2Q96SN7 254 aa37.58■■■■□ 3.61
CGREF1-202ENST00000312734 C1orf167Q5SNV9 1468 aa37.57■■■■□ 3.6
CGREF1-202ENST00000312734 NINLQ9Y2I6 1382 aa37.56■■■■□ 3.6
CGREF1-202ENST00000312734 SLAIN2Q9P270 581 aa37.54■■■■□ 3.6
CGREF1-202ENST00000312734 PLEKHG3A1L390 1219 aa37.54■■■■□ 3.6
CGREF1-202ENST00000312734 PHF8Q9UPP1 1060 aa37.53■■■■□ 3.6
CGREF1-202ENST00000312734 TERF2IPQ9NYB0 399 aa37.52■■■■□ 3.6
CGREF1-202ENST00000312734 TOPAZ1Q8N9V7 1692 aa37.52■■■■□ 3.6
CGREF1-202ENST00000312734 ACEP12821 1306 aa37.51■■■■□ 3.6
CGREF1-202ENST00000312734 HDGFL2Q7Z4V5 671 aaPredicted RBP37.5■■■■□ 3.59
CGREF1-202ENST00000312734 NGDNQ8NEJ9 315 aaKnown RBP37.5■■■■□ 3.59
CGREF1-202ENST00000312734 CERKQ8TCT0 537 aa37.5■■■■□ 3.59
CGREF1-202ENST00000312734 ITSN1Q15811 1721 aa37.49■■■■□ 3.59
CGREF1-202ENST00000312734 ANKRD36BQ8N2N9 1353 aa37.48■■■■□ 3.59
CGREF1-202ENST00000312734 A0A1W2PP64 1363 aa37.48■■■■□ 3.59
CGREF1-202ENST00000312734 CARD14Q9BXL6 1004 aa37.47■■■■□ 3.59
CGREF1-202ENST00000312734 CD163L1Q9NR16 1453 aa37.47■■■■□ 3.59
CGREF1-202ENST00000312734 DIEXFQ68CQ4 756 aaKnown RBP37.43■■■■□ 3.58
CGREF1-202ENST00000312734 ZNF692Q9BU19 519 aaPredicted RBP37.43■■■■□ 3.58
CGREF1-202ENST00000312734 KTN1Q86UP2 1357 aaKnown RBP37.42■■■■□ 3.58
CGREF1-202ENST00000312734 CPSF1Q10570 1443 aaKnown RBP37.42■■■■□ 3.58
CGREF1-202ENST00000312734 PER1O15534 1290 aaPredicted RBP37.41■■■■□ 3.58
CGREF1-202ENST00000312734 FOXO3O43524 673 aa37.41■■■■□ 3.58
CGREF1-202ENST00000312734 BRINP3Q76B58 766 aa37.4■■■■□ 3.58
CGREF1-202ENST00000312734 POLR3AO14802 1390 aaPredicted RBP37.4■■■■□ 3.58
CGREF1-202ENST00000312734 TOM1O60784 492 aa37.39■■■■□ 3.58
CGREF1-202ENST00000312734 KNSTRNQ9Y448 316 aa37.39■■■■□ 3.58
CGREF1-202ENST00000312734 CNGB1Q14028 1251 aaPredicted RBP37.38■■■■□ 3.57
CGREF1-202ENST00000312734 NSD3Q9BZ95 1437 aa37.38■■■■□ 3.57
CGREF1-202ENST00000312734 UBAP1LF5GYI3 381 aa37.37■■■■□ 3.57
CGREF1-202ENST00000312734 IQSEC2Q5JU85 1478 aa37.36■■■■□ 3.57
CGREF1-202ENST00000312734 PSME1Q06323 249 aa37.36■■■■□ 3.57
CGREF1-202ENST00000312734 DDX17Q92841 729 aaKnown RBP37.36■■■■□ 3.57
CGREF1-202ENST00000312734 XPCQ01831 940 aaPredicted RBP37.34■■■■□ 3.57
CGREF1-202ENST00000312734 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.33■■■■□ 3.57
CGREF1-202ENST00000312734 AKAP12Q02952 1782 aa37.33■■■■□ 3.57
CGREF1-202ENST00000312734 PIP4K2BP78356 416 aa37.32■■■■□ 3.56
CGREF1-202ENST00000312734 KIF1AQ12756 1690 aa37.32■■■■□ 3.56
CGREF1-202ENST00000312734 USP6P35125 1406 aa37.31■■■■□ 3.56
CGREF1-202ENST00000312734 KRT28Q7Z3Y7 464 aa37.28■■■■□ 3.56
CGREF1-202ENST00000312734 SCAF1Q9H7N4 1312 aaKnown RBP37.28■■■■□ 3.56
CGREF1-202ENST00000312734 EDC4Q6P2E9 1401 aaKnown RBP37.28■■■■□ 3.56
CGREF1-202ENST00000312734 PAK3O75914 559 aaPredicted RBP37.27■■■■□ 3.56
CGREF1-202ENST00000312734 MON2Q7Z3U7 1717 aa37.27■■■■□ 3.56
CGREF1-202ENST00000312734 CC2D1BQ5T0F9 858 aaKnown RBP37.26■■■■□ 3.56
CGREF1-202ENST00000312734 NPHP3Q7Z494 1330 aa37.26■■■■□ 3.56
CGREF1-202ENST00000312734 TTC21BQ7Z4L5 1316 aa37.26■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms