RNA–Protein interactions for RNA: ENST00000312123.13

GAPVD1-203, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GAPVD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-203ENST00000312123 ERICH3Q5RHP9 1530 aa8.63□□□□□ -1.03
GAPVD1-203ENST00000312123 NEK4P51957 841 aa8.63□□□□□ -1.03
GAPVD1-203ENST00000312123 RUFY2Q8WXA3 655 aa8.63□□□□□ -1.03
GAPVD1-203ENST00000312123 ZNF592Q92610 1267 aa8.63□□□□□ -1.03
GAPVD1-203ENST00000312123 CABP1Q9NZU7 370 aa8.63□□□□□ -1.03
GAPVD1-203ENST00000312123 PES1O00541 588 aaKnown RBP8.63□□□□□ -1.03
GAPVD1-203ENST00000312123 TWISTNBQ3B726 338 aaPredicted RBP8.63□□□□□ -1.03
GAPVD1-203ENST00000312123 NCBP3Q53F19 620 aaKnown RBP8.63□□□□□ -1.03
GAPVD1-203ENST00000312123 BICD2Q8TD16 824 aa8.63□□□□□ -1.03
GAPVD1-203ENST00000312123 CDC45O75419 566 aa8.62□□□□□ -1.03
GAPVD1-203ENST00000312123 SURF6O75683 361 aaKnown RBP8.62□□□□□ -1.03
GAPVD1-203ENST00000312123 NUCB2P80303 420 aa8.62□□□□□ -1.03
GAPVD1-203ENST00000312123 G3BP1Q13283 466 aaKnown RBP eCLIP8.62□□□□□ -1.03
GAPVD1-203ENST00000312123 TXNDC2Q86VQ3 553 aa8.62□□□□□ -1.03
GAPVD1-203ENST00000312123 TTC5Q8N0Z6 440 aa8.62□□□□□ -1.03
GAPVD1-203ENST00000312123 SMC3Q9UQE7 1217 aa8.62□□□□□ -1.03
GAPVD1-203ENST00000312123 MPNDQ8N594 471 aa8.62□□□□□ -1.03
GAPVD1-203ENST00000312123 APPP05067 770 aa8.62□□□□□ -1.03
GAPVD1-203ENST00000312123 PDE4CQ08493 712 aa8.62□□□□□ -1.03
GAPVD1-203ENST00000312123 CAVIN1Q6NZI2 390 aaKnown RBP8.62□□□□□ -1.03
GAPVD1-203ENST00000312123 CC2D2AQ9P2K1 1620 aa8.62□□□□□ -1.03
GAPVD1-203ENST00000312123 CCAR2Q8N163 923 aaKnown RBP8.61□□□□□ -1.03
GAPVD1-203ENST00000312123 C9orf84Q5VXU9 1444 aa8.61□□□□□ -1.03
GAPVD1-203ENST00000312123 UBTFL1P0CB47 393 aaPredicted RBP8.61□□□□□ -1.03
GAPVD1-203ENST00000312123 SULT6B1Q6IMI4 303 aa8.61□□□□□ -1.03
GAPVD1-203ENST00000312123 FAM43AQ8N2R8 423 aa8.61□□□□□ -1.03
GAPVD1-203ENST00000312123 SYTL4Q96C24 671 aaPredicted RBP8.61□□□□□ -1.03
GAPVD1-203ENST00000312123 THUMPD2Q9BTF0 503 aaKnown RBP8.61□□□□□ -1.03
GAPVD1-203ENST00000312123 DNAJC5BQ9UF47 199 aa8.61□□□□□ -1.03
GAPVD1-203ENST00000312123 CCDC34Q96HJ3 373 aa8.61□□□□□ -1.03
GAPVD1-203ENST00000312123 NEUROD6Q96NK8 337 aa8.61□□□□□ -1.03
GAPVD1-203ENST00000312123 CCDC27Q2M243 656 aa8.6□□□□□ -1.03
GAPVD1-203ENST00000312123 NLRP2Q9NX02 1062 aa8.6□□□□□ -1.03
GAPVD1-203ENST00000312123 SMG6Q86US8 1419 aaKnown RBP8.6□□□□□ -1.03
GAPVD1-203ENST00000312123 SCAPERQ9BY12 1400 aa8.6□□□□□ -1.03
GAPVD1-203ENST00000312123 CPLX1O14810 134 aa8.6□□□□□ -1.03
GAPVD1-203ENST00000312123 RAPGEF3O95398 923 aa8.6□□□□□ -1.03
GAPVD1-203ENST00000312123 SLC4A2P04920 1241 aa8.6□□□□□ -1.03
GAPVD1-203ENST00000312123 NASPP49321 788 aaPredicted RBP8.6□□□□□ -1.03
GAPVD1-203ENST00000312123 ATF7IPQ6VMQ6 1270 aa8.6□□□□□ -1.03
GAPVD1-203ENST00000312123 PRPF40AO75400 957 aaKnown RBP8.59□□□□□ -1.03
GAPVD1-203ENST00000312123 EVA1CP58658 441 aa8.59□□□□□ -1.03
GAPVD1-203ENST00000312123 DDX58O95786 925 aaKnown RBP8.59□□□□□ -1.03
GAPVD1-203ENST00000312123 MRE11P49959 708 aa8.59□□□□□ -1.03
GAPVD1-203ENST00000312123 RIC3Q7Z5B4 369 aa8.59□□□□□ -1.03
GAPVD1-203ENST00000312123 WWC1Q8IX03 1113 aa8.59□□□□□ -1.03
GAPVD1-203ENST00000312123 ARHGAP5Q13017 1502 aa8.59□□□□□ -1.03
GAPVD1-203ENST00000312123 TIAM1Q13009 1591 aa8.59□□□□□ -1.03
GAPVD1-203ENST00000312123 GRIN2BQ13224 1484 aa8.59□□□□□ -1.04
GAPVD1-203ENST00000312123 AAMPQ13685 434 aa8.58□□□□□ -1.04
GAPVD1-203ENST00000312123 RRS1Q15050 365 aaKnown RBP8.58□□□□□ -1.04
GAPVD1-203ENST00000312123 ANO8Q9HCE9 1232 aaPredicted RBP8.58□□□□□ -1.04
GAPVD1-203ENST00000312123 KDM4AO75164 1064 aa8.58□□□□□ -1.04
GAPVD1-203ENST00000312123 RAPGEF4Q8WZA2 1011 aa8.58□□□□□ -1.04
GAPVD1-203ENST00000312123 CDK19Q9BWU1 502 aa8.58□□□□□ -1.04
GAPVD1-203ENST00000312123 ROCK1Q13464 1354 aa8.58□□□□□ -1.04
GAPVD1-203ENST00000312123 POLA1P09884 1462 aaPredicted RBP8.58□□□□□ -1.04
GAPVD1-203ENST00000312123 SLFN5Q08AF3 891 aa8.58□□□□□ -1.04
GAPVD1-203ENST00000312123 CPLX2Q6PUV4 134 aaKnown RBP8.58□□□□□ -1.04
GAPVD1-203ENST00000312123 CLASRPQ8N2M8 674 aaKnown RBP8.58□□□□□ -1.04
GAPVD1-203ENST00000312123 TROQ12816 1431 aaPredicted RBP8.58□□□□□ -1.04
GAPVD1-203ENST00000312123 MVPQ14764 893 aaKnown RBP8.58□□□□□ -1.04
GAPVD1-203ENST00000312123 RNF20Q5VTR2 975 aa8.58□□□□□ -1.04
GAPVD1-203ENST00000312123 ABTB2Q8N961 1025 aa8.58□□□□□ -1.04
GAPVD1-203ENST00000312123 R3HCC1Q9Y3T6 440 aaKnown RBP8.57□□□□□ -1.04
GAPVD1-203ENST00000312123 FIBPO43427 364 aa8.57□□□□□ -1.04
GAPVD1-203ENST00000312123 AKAP17AQ02040 695 aaKnown RBP8.57□□□□□ -1.04
GAPVD1-203ENST00000312123 SLC26A8Q96RN1 970 aa8.57□□□□□ -1.04
GAPVD1-203ENST00000312123 CDK13Q14004 1512 aaKnown RBP8.57□□□□□ -1.04
GAPVD1-203ENST00000312123 DAPK1P53355 1430 aa8.57□□□□□ -1.04
GAPVD1-203ENST00000312123 ERBINQ96RT1 1412 aa8.57□□□□□ -1.04
GAPVD1-203ENST00000312123 TPD52L1Q16890 204 aaPredicted RBP8.57□□□□□ -1.04
GAPVD1-203ENST00000312123 ANKRD30BQ9BXX2 1392 aa8.56□□□□□ -1.04
GAPVD1-203ENST00000312123 GNAI3P08754 354 aa8.56□□□□□ -1.04
GAPVD1-203ENST00000312123 ERC2O15083 957 aa8.56□□□□□ -1.04
GAPVD1-203ENST00000312123 MARCH6O60337 910 aa8.56□□□□□ -1.04
GAPVD1-203ENST00000312123 TMEM57Q8N5G2 664 aa8.56□□□□□ -1.04
GAPVD1-203ENST00000312123 TPM3P06753 285 aa8.56□□□□□ -1.04
GAPVD1-203ENST00000312123 DCTN1Q14203 1278 aa8.56□□□□□ -1.04
GAPVD1-203ENST00000312123 WASHC4Q2M389 1173 aa8.56□□□□□ -1.04
GAPVD1-203ENST00000312123 HDGFL1Q5TGJ6 251 aa8.56□□□□□ -1.04
GAPVD1-203ENST00000312123 NOC3LQ8WTT2 800 aaKnown RBP8.56□□□□□ -1.04
GAPVD1-203ENST00000312123 MAP4K4O95819 1239 aaPredicted RBP8.56□□□□□ -1.04
GAPVD1-203ENST00000312123 HSP90AB4PQ58FF6 505 aa8.56□□□□□ -1.04
GAPVD1-203ENST00000312123 SYNE3Q6ZMZ3 975 aa8.56□□□□□ -1.04
GAPVD1-203ENST00000312123 WDR63Q8IWG1 891 aa8.56□□□□□ -1.04
GAPVD1-203ENST00000312123 FSD1Q9BTV5 496 aa8.56□□□□□ -1.04
GAPVD1-203ENST00000312123 MIS18AQ9NYP9 233 aa8.56□□□□□ -1.04
GAPVD1-203ENST00000312123 TMPOP42166 694 aaKnown RBP8.55□□□□□ -1.04
GAPVD1-203ENST00000312123 TRDNQ13061 729 aa8.55□□□□□ -1.04
GAPVD1-203ENST00000312123 IL1RAPL2Q9NP60 686 aa8.55□□□□□ -1.04
GAPVD1-203ENST00000312123 TOPBP1Q92547 1522 aa8.55□□□□□ -1.04
GAPVD1-203ENST00000312123 SYNJ2O15056 1496 aa8.55□□□□□ -1.04
GAPVD1-203ENST00000312123 VPS53Q5VIR6 699 aa8.55□□□□□ -1.04
GAPVD1-203ENST00000312123 TOP2BQ02880 1626 aa8.55□□□□□ -1.04
GAPVD1-203ENST00000312123 G3V3G9 751 aa8.55□□□□□ -1.04
GAPVD1-203ENST00000312123 DCAF8Q5TAQ9 597 aa8.55□□□□□ -1.04
GAPVD1-203ENST00000312123 CCDC30Q5VVM6 783 aa8.55□□□□□ -1.04
GAPVD1-203ENST00000312123 SASS6Q6UVJ0 657 aa8.55□□□□□ -1.04
GAPVD1-203ENST00000312123 CHD1LQ86WJ1 897 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms