RNA–Protein interactions for RNA: ENST00000311873.9

ZC3HC1-201, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2 BASIC

Gene ZC3HC1, Length 2,017 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-201ENST00000311873 FAM135BQ49AJ0 1406 aa16.17■□□□□ 0.18
ZC3HC1-201ENST00000311873 KIF7Q2M1P5 1343 aa16.17■□□□□ 0.18
ZC3HC1-201ENST00000311873 POLR3GLQ9BT43 218 aa16.17■□□□□ 0.18
ZC3HC1-201ENST00000311873 CCDC7Q96M83 1385 aa16.15■□□□□ 0.18
ZC3HC1-201ENST00000311873 SBNO2Q9Y2G9 1366 aa16.14■□□□□ 0.17
ZC3HC1-201ENST00000311873 SIRT1Q96EB6 747 aa16.13■□□□□ 0.17
ZC3HC1-201ENST00000311873 NALCNQ8IZF0 1738 aa16.13■□□□□ 0.17
ZC3HC1-201ENST00000311873 TMF1P82094 1093 aa16.12■□□□□ 0.17
ZC3HC1-201ENST00000311873 CABP2Q9NPB3 220 aa16.12■□□□□ 0.17
ZC3HC1-201ENST00000311873 NKTRP30414 1462 aaKnown RBP16.11■□□□□ 0.17
ZC3HC1-201ENST00000311873 PROSER2Q86WR7 435 aaPredicted RBP16.11■□□□□ 0.17
ZC3HC1-201ENST00000311873 DDX10Q13206 875 aaKnown RBP16.1■□□□□ 0.17
ZC3HC1-201ENST00000311873 DMRT2Q9Y5R5 561 aa16.1■□□□□ 0.17
ZC3HC1-201ENST00000311873 TMEM94Q12767 1356 aa16.1■□□□□ 0.17
ZC3HC1-201ENST00000311873 NUTM2FA1L443 756 aa16.09■□□□□ 0.17
ZC3HC1-201ENST00000311873 CDK19Q9BWU1 502 aa16.09■□□□□ 0.17
ZC3HC1-201ENST00000311873 XIRP1Q702N8 1843 aaKnown RBP16.09■□□□□ 0.17
ZC3HC1-201ENST00000311873 ADGRB2O60241 1585 aa16.09■□□□□ 0.17
ZC3HC1-201ENST00000311873 EVC2Q86UK5 1308 aa16.08■□□□□ 0.16
ZC3HC1-201ENST00000311873 MYOM1P52179 1685 aa16.08■□□□□ 0.16
ZC3HC1-201ENST00000311873 SRPK2P78362 688 aaKnown RBP16.07■□□□□ 0.16
ZC3HC1-201ENST00000311873 LRRC7Q96NW7 1537 aa16.07■□□□□ 0.16
ZC3HC1-201ENST00000311873 WASLO00401 505 aaPredicted RBP16.07■□□□□ 0.16
ZC3HC1-201ENST00000311873 PRR36Q9H6K5 1346 aa16.06■□□□□ 0.16
ZC3HC1-201ENST00000311873 ADGRL3Q9HAR2 1447 aa16.06■□□□□ 0.16
ZC3HC1-201ENST00000311873 C14orf37Q86TY3 774 aa16.06■□□□□ 0.16
ZC3HC1-201ENST00000311873 LTBP4Q8N2S1 1624 aa16.04■□□□□ 0.16
ZC3HC1-201ENST00000311873 USP32Q8NFA0 1604 aa16.04■□□□□ 0.16
ZC3HC1-201ENST00000311873 RGPD8O14715 1765 aaPredicted RBP16.03■□□□□ 0.16
ZC3HC1-201ENST00000311873 SLC12A5Q9H2X9 1139 aa16.03■□□□□ 0.16
ZC3HC1-201ENST00000311873 ATP7BP35670 1465 aa16.03■□□□□ 0.16
ZC3HC1-201ENST00000311873 CDC42BPGQ6DT37 1551 aa16.02■□□□□ 0.16
ZC3HC1-201ENST00000311873 FMN2Q9NZ56 1722 aa16.02■□□□□ 0.15
ZC3HC1-201ENST00000311873 TMC1Q8TDI8 760 aa16.01■□□□□ 0.15
ZC3HC1-201ENST00000311873 CDCA8Q53HL2 280 aa16.01■□□□□ 0.15
ZC3HC1-201ENST00000311873 NUDT16Q96DE0 195 aaKnown RBP16.01■□□□□ 0.15
ZC3HC1-201ENST00000311873 CABP1Q9NZU7 370 aa15.99■□□□□ 0.15
ZC3HC1-201ENST00000311873 SLC24A1O60721 1099 aa15.99■□□□□ 0.15
ZC3HC1-201ENST00000311873 C19orf44Q9H6X5 657 aa15.98■□□□□ 0.15
ZC3HC1-201ENST00000311873 PANK3Q9H999 370 aa15.98■□□□□ 0.15
ZC3HC1-201ENST00000311873 TOPAZ1Q8N9V7 1692 aa15.98■□□□□ 0.15
ZC3HC1-201ENST00000311873 PPIP5K1Q6PFW1 1433 aa15.98■□□□□ 0.15
ZC3HC1-201ENST00000311873 CD163L1Q9NR16 1453 aa15.97■□□□□ 0.15
ZC3HC1-201ENST00000311873 ATAD2Q6PL18 1390 aa15.97■□□□□ 0.15
ZC3HC1-201ENST00000311873 DIEXFQ68CQ4 756 aaKnown RBP15.97■□□□□ 0.15
ZC3HC1-201ENST00000311873 MSH6P52701 1360 aa15.96■□□□□ 0.14
ZC3HC1-201ENST00000311873 CNGB1Q14028 1251 aaPredicted RBP15.95■□□□□ 0.14
ZC3HC1-201ENST00000311873 PMFBP1Q8TBY8 1022 aa15.95■□□□□ 0.14
ZC3HC1-201ENST00000311873 PUS7Q96PZ0 661 aaKnown RBP15.95■□□□□ 0.14
ZC3HC1-201ENST00000311873 CARD14Q9BXL6 1004 aa15.95■□□□□ 0.14
ZC3HC1-201ENST00000311873 NCOA3Q9Y6Q9 1424 aa15.95■□□□□ 0.14
ZC3HC1-201ENST00000311873 CCDC61Q9Y6R9 512 aa15.95■□□□□ 0.14
ZC3HC1-201ENST00000311873 A0A1W2PP64 1363 aa15.94■□□□□ 0.14
ZC3HC1-201ENST00000311873 MST1RQ04912 1400 aa15.94■□□□□ 0.14
ZC3HC1-201ENST00000311873 ORAI2Q96SN7 254 aa15.94■□□□□ 0.14
ZC3HC1-201ENST00000311873 ATF3P18847 181 aa15.94■□□□□ 0.14
ZC3HC1-201ENST00000311873 ANKARQ7Z5J8 1434 aa15.93■□□□□ 0.14
ZC3HC1-201ENST00000311873 C1orf167Q5SNV9 1468 aa15.92■□□□□ 0.14
ZC3HC1-201ENST00000311873 DCCP43146 1447 aa15.92■□□□□ 0.14
ZC3HC1-201ENST00000311873 PER1O15534 1290 aaPredicted RBP15.92■□□□□ 0.14
ZC3HC1-201ENST00000311873 ITSN1Q15811 1721 aa15.92■□□□□ 0.14
ZC3HC1-201ENST00000311873 ESCO1Q5FWF5 840 aa15.91■□□□□ 0.14
ZC3HC1-201ENST00000311873 ANKRD36BQ8N2N9 1353 aa15.91■□□□□ 0.14
ZC3HC1-201ENST00000311873 ACEP12821 1306 aa15.9■□□□□ 0.14
ZC3HC1-201ENST00000311873 CADPS2Q86UW7 1296 aa15.9■□□□□ 0.14
ZC3HC1-201ENST00000311873 CPSF1Q10570 1443 aaKnown RBP15.9■□□□□ 0.14
ZC3HC1-201ENST00000311873 NSD3Q9BZ95 1437 aa15.9■□□□□ 0.14
ZC3HC1-201ENST00000311873 NINLQ9Y2I6 1382 aa15.89■□□□□ 0.13
ZC3HC1-201ENST00000311873 DDX17Q92841 729 aaKnown RBP15.89■□□□□ 0.13
ZC3HC1-201ENST00000311873 AKAP12Q02952 1782 aa15.89■□□□□ 0.13
ZC3HC1-201ENST00000311873 PLEKHG3A1L390 1219 aa15.89■□□□□ 0.13
ZC3HC1-201ENST00000311873 PHF8Q9UPP1 1060 aa15.88■□□□□ 0.13
ZC3HC1-201ENST00000311873 MON2Q7Z3U7 1717 aa15.87■□□□□ 0.13
ZC3HC1-201ENST00000311873 XPCQ01831 940 aaPredicted RBP15.87■□□□□ 0.13
ZC3HC1-201ENST00000311873 KTN1Q86UP2 1357 aaKnown RBP15.87■□□□□ 0.13
ZC3HC1-201ENST00000311873 TERF2IPQ9NYB0 399 aa15.87■□□□□ 0.13
ZC3HC1-201ENST00000311873 SLAIN2Q9P270 581 aa15.87■□□□□ 0.13
ZC3HC1-201ENST00000311873 POLR3AO14802 1390 aaPredicted RBP15.86■□□□□ 0.13
ZC3HC1-201ENST00000311873 FOXO3O43524 673 aa15.86■□□□□ 0.13
ZC3HC1-201ENST00000311873 CC2D1BQ5T0F9 858 aaKnown RBP15.86■□□□□ 0.13
ZC3HC1-201ENST00000311873 NGDNQ8NEJ9 315 aaKnown RBP15.86■□□□□ 0.13
ZC3HC1-201ENST00000311873 AMER1Q5JTC6 1135 aaPredicted RBP15.85■□□□□ 0.13
ZC3HC1-201ENST00000311873 HDGFL2Q7Z4V5 671 aaPredicted RBP15.85■□□□□ 0.13
ZC3HC1-201ENST00000311873 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.85■□□□□ 0.13
ZC3HC1-201ENST00000311873 NRKQ7Z2Y5 1582 aa15.85■□□□□ 0.13
ZC3HC1-201ENST00000311873 BRINP3Q76B58 766 aa15.85■□□□□ 0.13
ZC3HC1-201ENST00000311873 USP6P35125 1406 aa15.84■□□□□ 0.13
ZC3HC1-201ENST00000311873 MIER1Q8N108 512 aa15.84■□□□□ 0.13
ZC3HC1-201ENST00000311873 KNSTRNQ9Y448 316 aa15.84■□□□□ 0.13
ZC3HC1-201ENST00000311873 ZRANB1Q9UGI0 708 aa15.84■□□□□ 0.13
ZC3HC1-201ENST00000311873 SSH2Q76I76 1423 aa15.82■□□□□ 0.12
ZC3HC1-201ENST00000311873 NME9Q86XW9 330 aa15.82■□□□□ 0.12
ZC3HC1-201ENST00000311873 KIF1AQ12756 1690 aa15.82■□□□□ 0.12
ZC3HC1-201ENST00000311873 EDC4Q6P2E9 1401 aaKnown RBP15.81■□□□□ 0.12
ZC3HC1-201ENST00000311873 CERKQ8TCT0 537 aa15.81■□□□□ 0.12
ZC3HC1-201ENST00000311873 GGNBP2Q9H3C7 697 aa15.81■□□□□ 0.12
ZC3HC1-201ENST00000311873 FYB1O15117 783 aa15.8■□□□□ 0.12
ZC3HC1-201ENST00000311873 ROBO1Q9Y6N7 1651 aa15.8■□□□□ 0.12
ZC3HC1-201ENST00000311873 TTC21BQ7Z4L5 1316 aa15.8■□□□□ 0.12
ZC3HC1-201ENST00000311873 KIF20BQ96Q89 1820 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms